RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 FOXL2P58012 376 aa4.73□□□□□ -1.65
SMC4-219ENST00000487747 ABATP80404 500 aa4.73□□□□□ -1.65
SMC4-219ENST00000487747 Q0VFX4 171 aa4.73□□□□□ -1.65
SMC4-219ENST00000487747 PMPCAQ10713 525 aa4.73□□□□□ -1.65
SMC4-219ENST00000487747 CSHL1Q14406 222 aa4.73□□□□□ -1.65
SMC4-219ENST00000487747 NADSYN1Q6IA69 706 aa4.73□□□□□ -1.65
SMC4-219ENST00000487747 WDR93Q6P2C0 686 aa4.73□□□□□ -1.65
SMC4-219ENST00000487747 RTL10Q7L3V2 364 aa4.73□□□□□ -1.65
SMC4-219ENST00000487747 ENGASEQ8NFI3 743 aa4.73□□□□□ -1.65
SMC4-219ENST00000487747 FAR2Q96K12 515 aa4.73□□□□□ -1.65
SMC4-219ENST00000487747 ADAD1Q96M93 576 aaKnown RBP4.73□□□□□ -1.65
SMC4-219ENST00000487747 NAA15Q9BXJ9 866 aaKnown RBP4.73□□□□□ -1.65
SMC4-219ENST00000487747 ZNF304Q9HCX3 659 aa4.73□□□□□ -1.65
SMC4-219ENST00000487747 HIF1ANQ9NWT6 349 aa4.73□□□□□ -1.65
SMC4-219ENST00000487747 APAF1O14727 1248 aa4.72□□□□□ -1.65
SMC4-219ENST00000487747 KLKB1P03952 638 aa4.72□□□□□ -1.65
SMC4-219ENST00000487747 HOXC6P09630 235 aa4.72□□□□□ -1.65
SMC4-219ENST00000487747 IGFBP2P18065 325 aa4.72□□□□□ -1.65
SMC4-219ENST00000487747 MT3P25713 68 aa4.72□□□□□ -1.65
SMC4-219ENST00000487747 FAM3BP58499 235 aaPredicted RBP4.72□□□□□ -1.65
SMC4-219ENST00000487747 TAS2R50P59544 299 aa4.72□□□□□ -1.65
SMC4-219ENST00000487747 ROR2Q01974 943 aaKnown RBP4.72□□□□□ -1.65
SMC4-219ENST00000487747 CRYZQ08257 329 aaKnown RBP4.72□□□□□ -1.65
SMC4-219ENST00000487747 GPS2Q13227 327 aa4.72□□□□□ -1.65
SMC4-219ENST00000487747 COBLL1Q53SF7 1204 aa4.72□□□□□ -1.65
SMC4-219ENST00000487747 ARL13AQ5H913 290 aaPredicted RBP4.72□□□□□ -1.65
SMC4-219ENST00000487747 FAM209BQ5JX69 171 aa4.72□□□□□ -1.65
SMC4-219ENST00000487747 PRAMEF19Q5SWL8 479 aa4.72□□□□□ -1.65
SMC4-219ENST00000487747 FMNL3Q8IVF7 1028 aa4.72□□□□□ -1.65
SMC4-219ENST00000487747 WFIKKN2Q8TEU8 576 aa4.72□□□□□ -1.65
SMC4-219ENST00000487747 DNASE2BQ8WZ79 361 aa4.72□□□□□ -1.65
SMC4-219ENST00000487747 PHF21BQ96EK2 531 aa4.72□□□□□ -1.65
SMC4-219ENST00000487747 POLDIP3Q9BY77 421 aaKnown RBP4.72□□□□□ -1.65
SMC4-219ENST00000487747 DCLK3Q9C098 648 aa4.72□□□□□ -1.65
SMC4-219ENST00000487747 SFXN1Q9H9B4 322 aa4.72□□□□□ -1.65
SMC4-219ENST00000487747 TXLNGQ9NUQ3 528 aa4.72□□□□□ -1.65
SMC4-219ENST00000487747 PLEKHB1Q9UF11 243 aaPredicted RBP4.72□□□□□ -1.65
SMC4-219ENST00000487747 RAB21Q9UL25 225 aa4.72□□□□□ -1.65
SMC4-219ENST00000487747 SCN5AQ14524 2016 aa4.72□□□□□ -1.65
SMC4-219ENST00000487747 NTSR2O95665 410 aa4.71□□□□□ -1.66
SMC4-219ENST00000487747 CYP1A2P05177 515 aa4.71□□□□□ -1.66
SMC4-219ENST00000487747 TNFSF4P23510 183 aa4.71□□□□□ -1.66
SMC4-219ENST00000487747 PMS2P54278 862 aa4.71□□□□□ -1.66
SMC4-219ENST00000487747 RRP1P56182 461 aaKnown RBP4.71□□□□□ -1.66
SMC4-219ENST00000487747 RPL15P61313 204 aaKnown RBP4.71□□□□□ -1.66
SMC4-219ENST00000487747 KRTAP5-1Q6L8H4 278 aa4.71□□□□□ -1.66
SMC4-219ENST00000487747 MORC1Q86VD1 984 aa4.71□□□□□ -1.66
SMC4-219ENST00000487747 ADAMTS14Q8WXS8 1223 aa4.71□□□□□ -1.66
SMC4-219ENST00000487747 WDR77Q9BQA1 342 aaPredicted RBP4.71□□□□□ -1.66
SMC4-219ENST00000487747 RMI1Q9H9A7 625 aa4.71□□□□□ -1.66
SMC4-219ENST00000487747 KRCC1Q9NPI7 259 aaPredicted RBP4.71□□□□□ -1.66
SMC4-219ENST00000487747 STARD7Q9NQZ5 370 aa4.71□□□□□ -1.66
SMC4-219ENST00000487747 KLHL42Q9P2K6 505 aa4.71□□□□□ -1.66
SMC4-219ENST00000487747 WNT16Q9UBV4 365 aa4.71□□□□□ -1.66
SMC4-219ENST00000487747 OR6C75A6NL08 312 aa4.7□□□□□ -1.66
SMC4-219ENST00000487747 PMM2O15305 246 aa4.7□□□□□ -1.66
SMC4-219ENST00000487747 MSI1O43347 362 aaKnown RBP4.7□□□□□ -1.66
SMC4-219ENST00000487747 KRT86O43790 486 aa4.7□□□□□ -1.66
SMC4-219ENST00000487747 FGF18O76093 207 aa4.7□□□□□ -1.66
SMC4-219ENST00000487747 ANXA6P08133 673 aa4.7□□□□□ -1.66
SMC4-219ENST00000487747 MYL3P08590 195 aa4.7□□□□□ -1.66
SMC4-219ENST00000487747 KLRK1P26718 216 aa4.7□□□□□ -1.66
SMC4-219ENST00000487747 RASSF2P50749 326 aa4.7□□□□□ -1.66
SMC4-219ENST00000487747 SELENOVP59797 346 aa4.7□□□□□ -1.66
SMC4-219ENST00000487747 GPR18Q14330 331 aa4.7□□□□□ -1.66
SMC4-219ENST00000487747 GALNT3Q14435 633 aa4.7□□□□□ -1.66
SMC4-219ENST00000487747 KRT81Q14533 505 aa4.7□□□□□ -1.66
SMC4-219ENST00000487747 C10orf76Q5T2E6 689 aa4.7□□□□□ -1.66
SMC4-219ENST00000487747 PRSS57Q6UWY2 283 aa4.7□□□□□ -1.66
SMC4-219ENST00000487747 CUZD1Q86UP6 607 aa4.7□□□□□ -1.66
SMC4-219ENST00000487747 CLEC4CQ8WTT0 213 aa4.7□□□□□ -1.66
SMC4-219ENST00000487747 C18orf8Q96DM3 657 aa4.7□□□□□ -1.66
SMC4-219ENST00000487747 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.7□□□□□ -1.66
SMC4-219ENST00000487747 PLSCR4Q9NRQ2 329 aa4.7□□□□□ -1.66
SMC4-219ENST00000487747 NCKIPSDQ9NZQ3 722 aa4.7□□□□□ -1.66
SMC4-219ENST00000487747 TRPC5Q9UL62 973 aaPredicted RBP4.7□□□□□ -1.66
SMC4-219ENST00000487747 SLC12A4Q9UP95 1085 aa4.7□□□□□ -1.66
SMC4-219ENST00000487747 TNFSF13BQ9Y275 285 aa4.7□□□□□ -1.66
SMC4-219ENST00000487747 GAGE12JA6NER3 117 aa4.69□□□□□ -1.66
SMC4-219ENST00000487747 SPRY3O43610 288 aa4.69□□□□□ -1.66
SMC4-219ENST00000487747 RPP40O75818 363 aaKnown RBP4.69□□□□□ -1.66
SMC4-219ENST00000487747 ARSBP15848 533 aa4.69□□□□□ -1.66
SMC4-219ENST00000487747 EEF1GP26641 437 aaKnown RBP4.69□□□□□ -1.66
SMC4-219ENST00000487747 ZBTB16Q05516 673 aa4.69□□□□□ -1.66
SMC4-219ENST00000487747 IFIT5Q13325 482 aaKnown RBP4.69□□□□□ -1.66
SMC4-219ENST00000487747 RAB30Q15771 203 aa4.69□□□□□ -1.66
SMC4-219ENST00000487747 KRTAP27-1Q3LI81 207 aa4.69□□□□□ -1.66
SMC4-219ENST00000487747 FBXO38Q6PIJ6 1188 aa4.69□□□□□ -1.66
SMC4-219ENST00000487747 FAM83HQ6ZRV2 1179 aaPredicted RBP4.69□□□□□ -1.66
SMC4-219ENST00000487747 TTC30AQ86WT1 665 aa4.69□□□□□ -1.66
SMC4-219ENST00000487747 KDM1BQ8NB78 822 aa4.69□□□□□ -1.66
SMC4-219ENST00000487747 GABPB2Q8TAK5 448 aaPredicted RBP4.69□□□□□ -1.66
SMC4-219ENST00000487747 ZNF566Q969W8 418 aa4.69□□□□□ -1.66
SMC4-219ENST00000487747 MECRQ9BV79 373 aa4.69□□□□□ -1.66
SMC4-219ENST00000487747 EIF2AQ9BY44 585 aaKnown RBP4.69□□□□□ -1.66
SMC4-219ENST00000487747 SEZ6LQ9BYH1 1024 aa4.69□□□□□ -1.66
SMC4-219ENST00000487747 FRMD8Q9BZ67 464 aaPredicted RBP4.69□□□□□ -1.66
SMC4-219ENST00000487747 PNRC2Q9NPJ4 139 aaKnown RBP4.69□□□□□ -1.66
SMC4-219ENST00000487747 HELLSQ9NRZ9 838 aa4.69□□□□□ -1.66
SMC4-219ENST00000487747 KCNJ18B7U540 433 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms