RNA–Protein interactions for RNA: ENST00000486829.1

ARHGEF3-211, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-211ENST00000486829 C6orf118Q5T5N4 469 aa11.78□□□□□ -0.52
ARHGEF3-211ENST00000486829 FAM72AQ5TYM5 149 aa11.78□□□□□ -0.52
ARHGEF3-211ENST00000486829 FAM72DQ6L9T8 149 aa11.78□□□□□ -0.52
ARHGEF3-211ENST00000486829 RWDD4Q6NW29 188 aaKnown RBP11.78□□□□□ -0.52
ARHGEF3-211ENST00000486829 C14orf80Q86SX3 495 aa11.78□□□□□ -0.52
ARHGEF3-211ENST00000486829 SETD3Q86TU7 594 aaPredicted RBP11.78□□□□□ -0.52
ARHGEF3-211ENST00000486829 FAM72BQ86X60 149 aa11.78□□□□□ -0.52
ARHGEF3-211ENST00000486829 TMEM25Q86YD3 366 aa11.78□□□□□ -0.52
ARHGEF3-211ENST00000486829 SUGP1Q8IWZ8 645 aaKnown RBP11.78□□□□□ -0.52
ARHGEF3-211ENST00000486829 SLC35F6Q8N357 371 aa11.78□□□□□ -0.52
ARHGEF3-211ENST00000486829 RAPGEF5Q92565 580 aa11.78□□□□□ -0.52
ARHGEF3-211ENST00000486829 KRT35Q92764 455 aa11.78□□□□□ -0.52
ARHGEF3-211ENST00000486829 IGSF8Q969P0 613 aa11.78□□□□□ -0.52
ARHGEF3-211ENST00000486829 FAF2Q96CS3 445 aa11.78□□□□□ -0.52
ARHGEF3-211ENST00000486829 CSPG4P5Q96PW8 444 aa11.78□□□□□ -0.52
ARHGEF3-211ENST00000486829 CARD9Q9H257 536 aa11.78□□□□□ -0.52
ARHGEF3-211ENST00000486829 C8orf33Q9H7E9 229 aaPredicted RBP11.78□□□□□ -0.52
ARHGEF3-211ENST00000486829 KLHL11Q9NVR0 708 aa11.78□□□□□ -0.52
ARHGEF3-211ENST00000486829 TMEM248Q9NWD8 314 aa11.78□□□□□ -0.52
ARHGEF3-211ENST00000486829 GTSE1Q9NYZ3 720 aa11.78□□□□□ -0.52
ARHGEF3-211ENST00000486829 CWC15Q9P013 229 aaKnown RBP11.78□□□□□ -0.52
ARHGEF3-211ENST00000486829 NEU3Q9UQ49 428 aa11.78□□□□□ -0.52
ARHGEF3-211ENST00000486829 EFR3BQ9Y2G0 817 aa11.78□□□□□ -0.52
ARHGEF3-211ENST00000486829 DOCK4Q8N1I0 1966 aa11.78□□□□□ -0.52
ARHGEF3-211ENST00000486829 F5P12259 2224 aa11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 TRDMT1O14717 391 aaKnown RBP11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 DDX3YO15523 660 aaKnown RBP11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 LUC7L3O95232 432 aaKnown RBP11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 ZFXP17010 805 aaPredicted RBP11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 GJA4P35212 333 aa11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 ETFBP38117 255 aa11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 MARCKSL1P49006 195 aa11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 ETF1P62495 437 aaKnown RBP11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 ZNF177Q13360 481 aaPredicted RBP11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 TFDP2Q14188 446 aa11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 TAZQ16635 292 aa11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 TFDP3Q5H9I0 405 aa11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 ZNF783Q6ZMS7 281 aa11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 NLRP14Q86W24 1093 aa11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 RALGPS2Q86X27 583 aaPredicted RBP11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 CCDC50Q8IVM0 306 aa11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 MFN1Q8IWA4 741 aa11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 C17orf53Q8N3J3 647 aaPredicted RBP11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 LZTR1Q8N653 840 aa11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 RTL3Q8N8U3 475 aaKnown RBP11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 ALG3Q92685 438 aa11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 TLR10Q9BXR5 811 aa11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 MAK16Q9BXY0 300 aaKnown RBP11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 ARHGEF4Q9NR80 690 aa11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 MPP6Q9NZW5 540 aa11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 PACSIN2Q9UNF0 486 aaPredicted RBP11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 TBC1D30Q9Y2I9 924 aa11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 SNX10Q9Y5X0 201 aa11.77□□□□□ -0.53
ARHGEF3-211ENST00000486829 TICRRQ7Z2Z1 1910 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 CTAGE9A4FU28 777 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 C3orf70A6NLC5 250 aaPredicted RBP11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 H0Y626 953 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 CD48P09326 243 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 IL4RP24394 825 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 OR1E1P30953 314 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 CDKN2BP42772 138 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 SGSHP51688 502 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 SLC12A1Q13621 1099 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 ALFQ53S48 1182 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 ANKRD20A8PQ5CZ79 823 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 IER5LQ5T953 404 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 SEL1L2Q5TEA6 688 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 TMCO3Q6UWJ1 677 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 MFSD7Q6UXD7 560 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 SPOCD1Q6ZMY3 1216 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 NYAP1Q6ZVC0 841 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 NUDT18Q6ZVK8 323 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 ETFBKMTQ8IXQ9 262 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 CFAP52Q8N1V2 620 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 CARNMT1Q8N4J0 409 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 FIBINQ8TAL6 211 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 RNF25Q96BH1 459 aaPredicted RBP11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 MYEOVQ96EZ4 313 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 RNF157Q96PX1 679 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 NAPGQ99747 312 aaPredicted RBP11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 MAGEB5Q9BZ81 275 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 KIAA1522Q9P206 1035 aaPredicted RBP11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 DEC1Q9P2X7 70 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 WNT16Q9UBV4 365 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 ZNF212Q9UDV6 495 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 FBXO10Q9UK96 956 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 FBXL21Q9UKT6 434 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 SLC27A6Q9Y2P4 619 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 PIAS3Q9Y6X2 628 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 COL4A2P08572 1712 aa11.76□□□□□ -0.53
ARHGEF3-211ENST00000486829 MYOFQ9NZM1 2061 aa11.75□□□□□ -0.53
ARHGEF3-211ENST00000486829 COL4A3Q01955 1670 aa11.75□□□□□ -0.53
ARHGEF3-211ENST00000486829 hCG_1818297A0A087WSY0 165 aa11.75□□□□□ -0.53
ARHGEF3-211ENST00000486829 ILVBLA1L0T0 632 aa11.75□□□□□ -0.53
ARHGEF3-211ENST00000486829 KRBA1A5PL33 1030 aa11.75□□□□□ -0.53
ARHGEF3-211ENST00000486829 OTOL1A6NHN0 477 aaPredicted RBP11.75□□□□□ -0.53
ARHGEF3-211ENST00000486829 SPECC1L-ADORA2AF8WAN1 911 aa11.75□□□□□ -0.53
ARHGEF3-211ENST00000486829 CES2O00748 559 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms