RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 KLHL38Q2WGJ6 581 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 ARTNQ5T4W7 220 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 TPGS2Q68CL5 300 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 OTOP2Q7RTS6 562 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 CYP4X1Q8N118 509 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 ZNF461Q8TAF7 563 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 ACSS3Q9H6R3 686 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 SLC24A2Q9UI40 661 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 SPAG6O75602 509 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 ABLIM3O94929 683 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 HMBSP08397 361 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 EFTUD2Q15029 972 aaKnown RBP eCLIP17.15■□□□□ 0.343e-8■■■■□ 22.5
CTSA-207ENST00000484855 GLIPR1L2Q4G1C9 344 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 ARHGAP12Q8IWW6 846 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 ATPAF2Q8N5M1 289 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 PDCD7Q8N8D1 485 aaKnown RBP17.15■□□□□ 0.34
CTSA-207ENST00000484855 LRRC39Q96DD0 335 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 CFAP36Q96G28 342 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 BTN2A3PQ96KV6 586 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 CYP4F11Q9HBI6 524 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 IL23AQ9NPF7 189 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 HSFX1Q9UBD0 423 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 VANGL2Q9ULK5 521 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 CPP00450 1065 aa17.14■□□□□ 0.33
CTSA-207ENST00000484855 LSP1P33241 339 aa17.14■□□□□ 0.33
CTSA-207ENST00000484855 GEMIN4P57678 1058 aaKnown RBP17.14■□□□□ 0.33
CTSA-207ENST00000484855 ZNF33AQ06730 810 aa17.14■□□□□ 0.33
CTSA-207ENST00000484855 ZBTB17Q13105 803 aa17.14■□□□□ 0.33
CTSA-207ENST00000484855 MS4A13Q5J8X5 152 aa17.14■□□□□ 0.33
CTSA-207ENST00000484855 DDX53Q86TM3 631 aaKnown RBP17.14■□□□□ 0.33
CTSA-207ENST00000484855 RTL3Q8N8U3 475 aaKnown RBP17.14■□□□□ 0.33
CTSA-207ENST00000484855 PDZD8Q8NEN9 1154 aa17.14■□□□□ 0.33
CTSA-207ENST00000484855 CDK5RAP1Q96SZ6 601 aaKnown RBP17.14■□□□□ 0.33
CTSA-207ENST00000484855 MPP6Q9NZW5 540 aa17.14■□□□□ 0.33
CTSA-207ENST00000484855 PSMC3IPQ9P2W1 217 aaPredicted RBP17.14■□□□□ 0.33
CTSA-207ENST00000484855 FETUBQ9UGM5 382 aa17.14■□□□□ 0.33
CTSA-207ENST00000484855 TRHDEQ9UKU6 1024 aa17.14■□□□□ 0.33
CTSA-207ENST00000484855 ALPK3Q96L96 1907 aa17.14■□□□□ 0.33
CTSA-207ENST00000484855 ERICH4A6NGS2 130 aa17.13■□□□□ 0.33
CTSA-207ENST00000484855 ZBBXA8MT70 800 aa17.13■□□□□ 0.33
CTSA-207ENST00000484855 IGLV3-27P01718 113 aa17.13■□□□□ 0.33
CTSA-207ENST00000484855 GRIA1P42261 906 aa17.13■□□□□ 0.33
CTSA-207ENST00000484855 TADA2BQ86TJ2 420 aa17.13■□□□□ 0.33
CTSA-207ENST00000484855 MDM1Q8TC05 714 aa17.13■□□□□ 0.33
CTSA-207ENST00000484855 OVCA2Q8WZ82 227 aa17.13■□□□□ 0.33
CTSA-207ENST00000484855 MRRFQ96E11 262 aaKnown RBP17.13■□□□□ 0.33
CTSA-207ENST00000484855 ZNF512Q96ME7 567 aaPredicted RBP17.13■□□□□ 0.33
CTSA-207ENST00000484855 XPO6Q96QU8 1125 aaKnown RBP17.13■□□□□ 0.33
CTSA-207ENST00000484855 VAT1Q99536 393 aa17.13■□□□□ 0.33
CTSA-207ENST00000484855 ZC3H7BQ9UGR2 993 aaKnown RBP17.13■□□□□ 0.33
CTSA-207ENST00000484855 RSPH14Q9UHP6 348 aa17.13■□□□□ 0.33
CTSA-207ENST00000484855 YIPF1Q9Y548 306 aa17.13■□□□□ 0.33
CTSA-207ENST00000484855 ANAPC1Q9H1A4 1944 aa17.13■□□□□ 0.33
CTSA-207ENST00000484855 CSH1P0DML2 217 aa17.13■□□□□ 0.33
CTSA-207ENST00000484855 CSH2P0DML3 217 aa17.13■□□□□ 0.33
CTSA-207ENST00000484855 MLNP12872 115 aa17.13■□□□□ 0.33
CTSA-207ENST00000484855 DNAJB2P25686 324 aa17.13■□□□□ 0.33
CTSA-207ENST00000484855 PPM1AP35813 382 aa17.13■□□□□ 0.33
CTSA-207ENST00000484855 TEX44Q53QW1 395 aa17.13■□□□□ 0.33
CTSA-207ENST00000484855 ITPRIPL1Q6GPH6 555 aa17.13■□□□□ 0.33
CTSA-207ENST00000484855 LRRC31Q6UY01 552 aa17.13■□□□□ 0.33
CTSA-207ENST00000484855 AGAP3Q96P47 875 aa17.13■□□□□ 0.33
CTSA-207ENST00000484855 GBA3Q9H227 469 aa17.13■□□□□ 0.33
CTSA-207ENST00000484855 NDFIP2Q9NV92 336 aa17.13■□□□□ 0.33
CTSA-207ENST00000484855 TCRBV9S1A1TA0A576 114 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 WASH4PA8MWX3 477 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 FOXO6A8MYZ6 492 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 ZBTB24O43167 697 aaPredicted RBP17.12■□□□□ 0.33
CTSA-207ENST00000484855 CHN1P15882 459 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 CCNCP24863 283 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 STX2P32856 288 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 ALDH1A3P47895 512 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 KPNA1P52294 538 aaPredicted RBP17.12■□□□□ 0.33
CTSA-207ENST00000484855 RING1Q06587 406 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 NR1H3Q13133 447 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 LRRC8BQ6P9F7 803 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 ARHGAP36Q6ZRI8 547 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 ZNF683Q8IZ20 524 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 AUTS2Q8WXX7 1259 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 MAML1Q92585 1016 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 SIGLEC10Q96LC7 697 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 CYTH2Q99418 400 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 PAFAH2Q99487 392 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 SLC39A8Q9C0K1 460 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 PPARGC1AQ9UBK2 798 aaKnown RBP17.12■□□□□ 0.33
CTSA-207ENST00000484855 MAD1L1Q9Y6D9 718 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 RAB33AQ14088 237 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 RASA2Q15283 850 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 RAP1GAP2Q684P5 730 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 NLRP14Q86W24 1093 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 SRRM1Q8IYB3 904 aaKnown RBP17.12■□□□□ 0.33
CTSA-207ENST00000484855 MPP5Q8N3R9 675 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 DPF3Q92784 378 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 TSGA13Q96PP4 275 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 ZYG11BQ9C0D3 744 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 NACA2Q9H009 215 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 FNIP2Q9P278 1114 aa17.12■□□□□ 0.33
CTSA-207ENST00000484855 HBS1LQ9Y450 684 aaKnown RBP17.12■□□□□ 0.33
CTSA-207ENST00000484855 PLXNA4Q9HCM2 1894 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 RASA4BC9J798 803 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms