RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 EPHB6O15197 1021 aa10.37□□□□□ -0.75
CPSF4-213ENST00000484112 TEX33O43247 280 aa10.37□□□□□ -0.75
CPSF4-213ENST00000484112 PAPSS1O43252 624 aaPredicted RBP10.37□□□□□ -0.75
CPSF4-213ENST00000484112 GFPT2O94808 682 aa10.37□□□□□ -0.75
CPSF4-213ENST00000484112 CALCAP01258 141 aa10.37□□□□□ -0.75
CPSF4-213ENST00000484112 CYP1A1P04798 512 aaPredicted RBP10.37□□□□□ -0.75
CPSF4-213ENST00000484112 OXTRP30559 389 aa10.37□□□□□ -0.75
CPSF4-213ENST00000484112 CSNK1EP49674 416 aaKnown RBP10.37□□□□□ -0.75
CPSF4-213ENST00000484112 KLK7P49862 253 aa10.37□□□□□ -0.75
CPSF4-213ENST00000484112 UBASH3AP57075 661 aa10.37□□□□□ -0.75
CPSF4-213ENST00000484112 ARID5AQ03989 594 aa10.37□□□□□ -0.75
CPSF4-213ENST00000484112 CYP4F3Q08477 520 aa10.37□□□□□ -0.75
CPSF4-213ENST00000484112 E2F5Q15329 346 aa10.37□□□□□ -0.75
CPSF4-213ENST00000484112 ACBD5Q5T8D3 534 aaPredicted RBP10.37□□□□□ -0.75
CPSF4-213ENST00000484112 SLC26A9Q7LBE3 791 aa10.37□□□□□ -0.75
CPSF4-213ENST00000484112 TMPRSS7Q7RTY8 843 aa10.37□□□□□ -0.75
CPSF4-213ENST00000484112 GLRX5Q86SX6 157 aa10.37□□□□□ -0.75
CPSF4-213ENST00000484112 NOP9Q86U38 636 aaKnown RBP10.37□□□□□ -0.75
CPSF4-213ENST00000484112 METTL3Q86U44 580 aaKnown RBP10.37□□□□□ -0.75
CPSF4-213ENST00000484112 FAM217AQ8IXS0 508 aa10.37□□□□□ -0.75
CPSF4-213ENST00000484112 ZNF557Q8N988 423 aaPredicted RBP10.37□□□□□ -0.75
CPSF4-213ENST00000484112 CADM4Q8NFZ8 388 aa10.37□□□□□ -0.75
CPSF4-213ENST00000484112 FAM149B1Q96BN6 582 aa10.37□□□□□ -0.75
CPSF4-213ENST00000484112 C18orf8Q96DM3 657 aa10.37□□□□□ -0.75
CPSF4-213ENST00000484112 P2RY11Q96G91 374 aa10.37□□□□□ -0.75
CPSF4-213ENST00000484112 CPXM1Q96SM3 734 aa10.37□□□□□ -0.75
CPSF4-213ENST00000484112 CIPCQ9C0C6 399 aa10.37□□□□□ -0.75
CPSF4-213ENST00000484112 NLRC4Q9NPP4 1024 aa10.37□□□□□ -0.75
CPSF4-213ENST00000484112 KIAA1522Q9P206 1035 aaPredicted RBP10.37□□□□□ -0.75
CPSF4-213ENST00000484112 THAP10Q9P2Z0 257 aaPredicted RBP10.37□□□□□ -0.75
CPSF4-213ENST00000484112 CYTH4Q9UIA0 394 aa10.37□□□□□ -0.75
CPSF4-213ENST00000484112 TLR6Q9Y2C9 796 aa10.37□□□□□ -0.75
CPSF4-213ENST00000484112 ITIH6Q6UXX5 1313 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 ZFYVE26Q68DK2 2539 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 SLC12A8A0AV02 714 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 FAM149AA5PLN7 773 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 TRABD2BA6NFA1 517 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 KCNK3O14649 394 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 IRAK2O43187 625 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 CBFA2T2O43439 604 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 ZIC2O95409 532 aaPredicted RBP10.36□□□□□ -0.75
CPSF4-213ENST00000484112 IGLV3-27P01718 113 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 KLKB1P03952 638 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 FYNP06241 537 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 EPHX1P07099 455 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 PNMA6AP0CW24 399 aaPredicted RBP10.36□□□□□ -0.75
CPSF4-213ENST00000484112 SLC2A3P11169 496 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 CORO1AP31146 461 aaKnown RBP10.36□□□□□ -0.75
CPSF4-213ENST00000484112 GSCP56915 257 aaPredicted RBP10.36□□□□□ -0.75
CPSF4-213ENST00000484112 NOMO3P69849 1222 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 BNC1Q01954 994 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 SLC6A3Q01959 620 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 ZNF234Q14588 700 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 SUZ12Q15022 739 aaKnown RBP10.36□□□□□ -0.75
CPSF4-213ENST00000484112 FYB2Q5VWT5 728 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 OLFML1Q6UWY5 402 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 ERICH1Q86X53 443 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 SORCS1Q8WY21 1168 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 EDEM1Q92611 657 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 SYN2Q92777 582 aaPredicted RBP10.36□□□□□ -0.75
CPSF4-213ENST00000484112 NAP1L5Q96NT1 182 aaPredicted RBP10.36□□□□□ -0.75
CPSF4-213ENST00000484112 BBC3Q96PG8 261 aaPredicted RBP10.36□□□□□ -0.75
CPSF4-213ENST00000484112 SLC2A13Q96QE2 648 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 CDC6Q99741 560 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 DDX50Q9BQ39 737 aaKnown RBP10.36□□□□□ -0.75
CPSF4-213ENST00000484112 TTYH3Q9C0H2 523 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 ELOVL2Q9NXB9 296 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 AIPL1Q9NZN9 384 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 FBXO10Q9UK96 956 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 CLEC4EQ9ULY5 219 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 BTBD3Q9Y2F9 522 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 SLC27A6Q9Y2P4 619 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 BZW2Q9Y6E2 419 aaKnown RBP10.36□□□□□ -0.75
CPSF4-213ENST00000484112 PKD1L2Q7Z442 2459 aa10.36□□□□□ -0.75
CPSF4-213ENST00000484112 AKAP13Q12802 2813 aa10.35□□□□□ -0.75
CPSF4-213ENST00000484112 PLXNB3Q9ULL4 1909 aa10.35□□□□□ -0.75
CPSF4-213ENST00000484112 NPC1O15118 1278 aa10.35□□□□□ -0.75
CPSF4-213ENST00000484112 FLRT2O43155 660 aa10.35□□□□□ -0.75
CPSF4-213ENST00000484112 DAB1O75553 588 aa10.35□□□□□ -0.75
CPSF4-213ENST00000484112 PENKP01210 267 aaPredicted RBP10.35□□□□□ -0.75
CPSF4-213ENST00000484112 IGLV3-25P01717 112 aa10.35□□□□□ -0.75
CPSF4-213ENST00000484112 CYBBP04839 570 aa10.35□□□□□ -0.75
CPSF4-213ENST00000484112 MMEP08473 750 aa10.35□□□□□ -0.75
CPSF4-213ENST00000484112 ZNF883P0CG24 379 aa10.35□□□□□ -0.75
CPSF4-213ENST00000484112 UNGP13051 313 aaPredicted RBP10.35□□□□□ -0.75
CPSF4-213ENST00000484112 HLA-EP13747 358 aa10.35□□□□□ -0.75
CPSF4-213ENST00000484112 MMP8P22894 467 aa10.35□□□□□ -0.75
CPSF4-213ENST00000484112 PRKCHP24723 683 aa10.35□□□□□ -0.75
CPSF4-213ENST00000484112 NOS2P35228 1153 aa10.35□□□□□ -0.75
CPSF4-213ENST00000484112 PBX1P40424 430 aa10.35□□□□□ -0.75
CPSF4-213ENST00000484112 PRKCIP41743 596 aa10.35□□□□□ -0.75
CPSF4-213ENST00000484112 SLC11A2P49281 568 aa10.35□□□□□ -0.75
CPSF4-213ENST00000484112 COPAP53621 1224 aa10.35□□□□□ -0.75
CPSF4-213ENST00000484112 CDK17Q00537 523 aa10.35□□□□□ -0.75
CPSF4-213ENST00000484112 FMO1Q01740 532 aa10.35□□□□□ -0.75
CPSF4-213ENST00000484112 CENPCQ03188 943 aa10.35□□□□□ -0.75
CPSF4-213ENST00000484112 EIF4EBP2Q13542 120 aaPredicted RBP10.35□□□□□ -0.75
CPSF4-213ENST00000484112 KIF19Q2TAC6 998 aa10.35□□□□□ -0.75
CPSF4-213ENST00000484112 PTPN20Q4JDL3 420 aa10.35□□□□□ -0.75
CPSF4-213ENST00000484112 MPP7Q5T2T1 576 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms