RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 HAO1Q9UJM8 370 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 TSPAN16Q9UKR8 245 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 TTLL3Q9Y4R7 772 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 A0A087WZ62 844 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 A0A0U1RQF3 1178 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.37□□□□□ -1.07
SORT1-205ENST00000483508 HACD1B0YJ81 288 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 I3L4J1 428 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 KCNN4O15554 427 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 TSPAN1O60635 241 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 GCATO75600 419 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 KRT38O76015 456 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 T-ENOLP0DO92 83 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 NEFHP12036 1026 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 ARF4P18085 180 aaPredicted RBP8.37□□□□□ -1.07
SORT1-205ENST00000483508 CALB2P22676 271 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 AVPR2P30518 371 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 FDFT1P37268 417 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 MTHFRP42898 656 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 ACADSBP45954 432 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 SERPINB4P48594 390 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 CLNS1AP54105 237 aaKnown RBP8.37□□□□□ -1.07
SORT1-205ENST00000483508 SARNPP82979 210 aaKnown RBP8.37□□□□□ -1.07
SORT1-205ENST00000483508 MMRN1Q13201 1228 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 NAB1Q13506 487 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 PCBP1Q15365 356 aaKnown RBP eCLIP8.37□□□□□ -1.07
SORT1-205ENST00000483508 TAF5Q15542 800 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 KBTBD12Q3ZCT8 623 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 CCDC14Q49A88 953 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 ATAT1Q5SQI0 421 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 RARS2Q5T160 578 aaKnown RBP8.37□□□□□ -1.07
SORT1-205ENST00000483508 STXBP5Q5T5C0 1151 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 TRNP1Q6NT89 227 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 C1orf228Q6PIY5 440 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 GLB1LQ6UWU2 654 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 OLFML1Q6UWY5 402 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 NPNTQ6UXI9 565 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 SH2D5Q6ZV89 423 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 CYS1Q717R9 158 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 BZW1Q7L1Q6 419 aaKnown RBP8.37□□□□□ -1.07
SORT1-205ENST00000483508 CATSPER4Q7RTX7 472 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 CLNKQ7Z7G1 428 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 ZC3H18Q86VM9 953 aaKnown RBP8.37□□□□□ -1.07
SORT1-205ENST00000483508 LONP2Q86WA8 852 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 CDR2LQ86X02 465 aaPredicted RBP8.37□□□□□ -1.07
SORT1-205ENST00000483508 LRRC6Q86X45 466 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 HACE1Q8IYU2 909 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 VPS52Q8N1B4 723 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 ARHGAP24Q8N264 748 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 LRRC52Q8N7C0 313 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 MRPL43Q8N983 215 aaKnown RBP8.37□□□□□ -1.07
SORT1-205ENST00000483508 KREMEN2Q8NCW0 462 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 FAM13CQ8NE31 585 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 UBA3Q8TBC4 463 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 FAM172AQ8WUF8 416 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 UTP4Q969X6 686 aaKnown RBP8.37□□□□□ -1.07
SORT1-205ENST00000483508 SKA1Q96BD8 255 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 KIF12Q96FN5 646 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 NSL1Q96IY1 281 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 C7orf26Q96N11 449 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 FAM193BQ96PV7 902 aaPredicted RBP8.37□□□□□ -1.07
SORT1-205ENST00000483508 FDXACB1Q9BRP7 624 aaPredicted RBP8.37□□□□□ -1.07
SORT1-205ENST00000483508 SIKE1Q9BRV8 207 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 SNRNP25Q9BV90 132 aaKnown RBP8.37□□□□□ -1.07
SORT1-205ENST00000483508 TBC1D10AQ9BXI6 508 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 MMADHCQ9H3L0 296 aaPredicted RBP8.37□□□□□ -1.07
SORT1-205ENST00000483508 C10orf88Q9H8K7 445 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 POPDC2Q9HBU9 364 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 CHST12Q9NRB3 414 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 RAB6BQ9NRW1 208 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 RCOR3Q9P2K3 495 aaPredicted RBP8.37□□□□□ -1.07
SORT1-205ENST00000483508 SLC17A7Q9P2U7 560 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 ZC3H7BQ9UGR2 993 aaKnown RBP8.37□□□□□ -1.07
SORT1-205ENST00000483508 TRIM33Q9UPN9 1127 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 PIN4Q9Y237 131 aaKnown RBP8.37□□□□□ -1.07
SORT1-205ENST00000483508 INPP5FQ9Y2H2 1132 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 HCFC2Q9Y5Z7 792 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 SCN1AP35498 2009 aa8.37□□□□□ -1.07
SORT1-205ENST00000483508 C2orf71A6NGG8 1288 aa8.36□□□□□ -1.07
SORT1-205ENST00000483508 FAM159BA6NKW6 160 aa8.36□□□□□ -1.07
SORT1-205ENST00000483508 A8MUI8 341 aa8.36□□□□□ -1.07
SORT1-205ENST00000483508 TRIM49D1C9J1S8 452 aa8.36□□□□□ -1.07
SORT1-205ENST00000483508 BIRC5O15392 142 aa8.36□□□□□ -1.07
SORT1-205ENST00000483508 KIF1CO43896 1103 aaKnown RBP8.36□□□□□ -1.07
SORT1-205ENST00000483508 DIAPH2O60879 1101 aa8.36□□□□□ -1.07
SORT1-205ENST00000483508 CLASP2O75122 1294 aaKnown RBP8.36□□□□□ -1.07
SORT1-205ENST00000483508 PEX11AO75192 247 aa8.36□□□□□ -1.07
SORT1-205ENST00000483508 CSDE1O75534 798 aaKnown RBP8.36□□□□□ -1.07
SORT1-205ENST00000483508 APOEP02649 317 aa8.36□□□□□ -1.07
SORT1-205ENST00000483508 C1QAP02745 245 aa8.36□□□□□ -1.07
SORT1-205ENST00000483508 PYGBP11216 843 aa8.36□□□□□ -1.07
SORT1-205ENST00000483508 MLNP12872 115 aa8.36□□□□□ -1.07
SORT1-205ENST00000483508 CYP3A5P20815 502 aa8.36□□□□□ -1.07
SORT1-205ENST00000483508 RBL1P28749 1068 aa8.36□□□□□ -1.07
SORT1-205ENST00000483508 MAGEA3P43357 314 aa8.36□□□□□ -1.07
SORT1-205ENST00000483508 RPL34P49207 117 aaKnown RBP8.36□□□□□ -1.07
SORT1-205ENST00000483508 RAB27AP51159 221 aa8.36□□□□□ -1.07
SORT1-205ENST00000483508 ORC1Q13415 861 aa8.36□□□□□ -1.07
SORT1-205ENST00000483508 ZRSR2Q15696 482 aaKnown RBP8.36□□□□□ -1.07
SORT1-205ENST00000483508 TBCCQ15814 346 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms