RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 PLA2G6O60733 806 aa13□□□□□ -0.33
VPS52-218ENST00000482399 TXNP10599 105 aaKnown RBP13□□□□□ -0.33
VPS52-218ENST00000482399 HNRNPLP14866 589 aaKnown RBP eCLIP13□□□□□ -0.33
VPS52-218ENST00000482399 RBP5P82980 135 aa13□□□□□ -0.33
VPS52-218ENST00000482399 PCLAFQ15004 111 aa13□□□□□ -0.33
VPS52-218ENST00000482399 CERCAMQ5T4B2 595 aa13□□□□□ -0.33
VPS52-218ENST00000482399 STYK1Q6J9G0 422 aa13□□□□□ -0.33
VPS52-218ENST00000482399 FBXL19Q6PCT2 694 aa13□□□□□ -0.33
VPS52-218ENST00000482399 AAGABQ6PD74 315 aa13□□□□□ -0.33
VPS52-218ENST00000482399 B3GNT6Q6ZMB0 384 aa13□□□□□ -0.33
VPS52-218ENST00000482399 TSHZ1Q6ZSZ6 1077 aa13□□□□□ -0.33
VPS52-218ENST00000482399 MAPK15Q8TD08 544 aa13□□□□□ -0.33
VPS52-218ENST00000482399 DGCR14Q96DF8 476 aaKnown RBP13□□□□□ -0.33
VPS52-218ENST00000482399 ZNF778Q96MU6 729 aa13□□□□□ -0.33
VPS52-218ENST00000482399 TMEM79Q9BSE2 394 aa13□□□□□ -0.33
VPS52-218ENST00000482399 C2orf40Q9H1Z8 148 aa13□□□□□ -0.33
VPS52-218ENST00000482399 ATXN10Q9UBB4 475 aa13□□□□□ -0.33
VPS52-218ENST00000482399 FNDC3AQ9Y2H6 1198 aaKnown RBP13□□□□□ -0.33
VPS52-218ENST00000482399 SH3BP1Q9Y3L3 701 aa13□□□□□ -0.33
VPS52-218ENST00000482399 TMEM233B4DJY2 109 aa13□□□□□ -0.33
VPS52-218ENST00000482399 M0QYT0 321 aa13□□□□□ -0.33
VPS52-218ENST00000482399 KLF11O14901 512 aa13□□□□□ -0.33
VPS52-218ENST00000482399 FOXD2O60548 495 aaPredicted RBP13□□□□□ -0.33
VPS52-218ENST00000482399 AOC1P19801 751 aa13□□□□□ -0.33
VPS52-218ENST00000482399 EEF1B2P24534 225 aaKnown RBP13□□□□□ -0.33
VPS52-218ENST00000482399 ACAT1P24752 427 aaKnown RBP13□□□□□ -0.33
VPS52-218ENST00000482399 MPP3Q13368 585 aa13□□□□□ -0.33
VPS52-218ENST00000482399 TEX44Q53QW1 395 aa13□□□□□ -0.33
VPS52-218ENST00000482399 PITRM1Q5JRX3 1037 aa13□□□□□ -0.33
VPS52-218ENST00000482399 XRRA1Q6P2D8 792 aa13□□□□□ -0.33
VPS52-218ENST00000482399 C16orf89Q6UX73 402 aa13□□□□□ -0.33
VPS52-218ENST00000482399 TMC7Q7Z402 723 aa13□□□□□ -0.33
VPS52-218ENST00000482399 FAM83AQ86UY5 434 aa13□□□□□ -0.33
VPS52-218ENST00000482399 ZNF786Q8N393 782 aa13□□□□□ -0.33
VPS52-218ENST00000482399 FNIP1Q8TF40 1166 aa13□□□□□ -0.33
VPS52-218ENST00000482399 LENG1Q96BZ8 264 aaPredicted RBP13□□□□□ -0.33
VPS52-218ENST00000482399 DTNBP1Q96EV8 351 aa13□□□□□ -0.33
VPS52-218ENST00000482399 CERS2Q96G23 380 aa13□□□□□ -0.33
VPS52-218ENST00000482399 P2RY11Q96G91 374 aa13□□□□□ -0.33
VPS52-218ENST00000482399 FRMD8Q9BZ67 464 aaPredicted RBP13□□□□□ -0.33
VPS52-218ENST00000482399 CDYLQ9Y232 598 aa13□□□□□ -0.33
VPS52-218ENST00000482399 H3BSA7 217 aa13□□□□□ -0.33
VPS52-218ENST00000482399 ACKR2O00590 384 aa13□□□□□ -0.33
VPS52-218ENST00000482399 BIRC5O15392 142 aa13□□□□□ -0.33
VPS52-218ENST00000482399 CILPO75339 1184 aa13□□□□□ -0.33
VPS52-218ENST00000482399 CRTAMO95727 393 aa13□□□□□ -0.33
VPS52-218ENST00000482399 C2P06681 752 aa13□□□□□ -0.33
VPS52-218ENST00000482399 ADARP55265 1226 aaKnown RBP13□□□□□ -0.33
VPS52-218ENST00000482399 CLDN10P78369 228 aa13□□□□□ -0.33
VPS52-218ENST00000482399 SLC6A3Q01959 620 aa13□□□□□ -0.33
VPS52-218ENST00000482399 ITKQ08881 620 aa13□□□□□ -0.33
VPS52-218ENST00000482399 MSLNQ13421 630 aaPredicted RBP13□□□□□ -0.33
VPS52-218ENST00000482399 C16orf72Q14CZ0 275 aa13□□□□□ -0.33
VPS52-218ENST00000482399 RPS6KA2Q15349 733 aa13□□□□□ -0.33
VPS52-218ENST00000482399 KIF19Q2TAC6 998 aa13□□□□□ -0.33
VPS52-218ENST00000482399 ATP6V1E2Q96A05 226 aa13□□□□□ -0.33
VPS52-218ENST00000482399 MRPL45Q9BRJ2 306 aaKnown RBP13□□□□□ -0.33
VPS52-218ENST00000482399 LHX5Q9H2C1 402 aa13□□□□□ -0.33
VPS52-218ENST00000482399 PDLIM7Q9NR12 457 aa13□□□□□ -0.33
VPS52-218ENST00000482399 ZNF180Q9UJW8 692 aa13□□□□□ -0.33
VPS52-218ENST00000482399 ZNF214Q9UL59 606 aaPredicted RBP13□□□□□ -0.33
VPS52-218ENST00000482399 TCRBV5S1A1TA0A578 114 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 HMX2A2RU54 273 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 ADCY6O43306 1168 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 MFSD11O43934 449 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 ITGBL1O95965 494 aaPredicted RBP12.99□□□□□ -0.33
VPS52-218ENST00000482399 PRKCHP24723 683 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 RGS2P41220 211 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 GRIA4P48058 902 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 CDH15P55291 814 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 FKBP1AP62942 108 aaKnown RBP12.99□□□□□ -0.33
VPS52-218ENST00000482399 POU6F1Q14863 301 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 KLHDC10Q6PID8 442 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 RPS27LQ71UM5 84 aaKnown RBP12.99□□□□□ -0.33
VPS52-218ENST00000482399 KCTD4Q8WVF5 259 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 PHF21BQ96EK2 531 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 CSPG4P5Q96PW8 444 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 CIB1Q99828 191 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 GATA5Q9BWX5 397 aaPredicted RBP12.99□□□□□ -0.33
VPS52-218ENST00000482399 TMEM134Q9H6X4 195 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 DTLQ9NZJ0 730 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 VANGL2Q9ULK5 521 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 ABCA3Q99758 1704 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 PTPN7P35236 360 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 SNX16P57768 344 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 KIZQ2M2Z5 673 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 ARL13AQ5H913 290 aaPredicted RBP12.99□□□□□ -0.33
VPS52-218ENST00000482399 RNF111Q6ZNA4 994 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 LPCAT2Q7L5N7 544 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 DEFB106AQ8N104 65 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 SIX6OS1Q8N1H7 587 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 SLC7A14Q8TBB6 771 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 TBCBQ99426 244 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 PDGFDQ9GZP0 370 aaPredicted RBP12.99□□□□□ -0.33
VPS52-218ENST00000482399 FAM96AQ9H5X1 160 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 PIF1Q9H611 641 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 ITGA11Q9UKX5 1188 aa12.99□□□□□ -0.33
VPS52-218ENST00000482399 MAFBQ9Y5Q3 323 aaPredicted RBP12.99□□□□□ -0.33
VPS52-218ENST00000482399 A0A0A0MRY4 1105 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 MAGEB3O15480 346 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms