RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 PIK3CGP48736 1102 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 PCBP3P57721 371 aaKnown RBP3.52□□□□□ -1.85
SMC6-208ENST00000481708 HERVK_113P62684 666 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 RTP5Q14D33 572 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 STXBP5Q5T5C0 1151 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 FKBP1CQ5VVH2 108 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 TTI2Q6NXR4 508 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 MSANTD2Q6P1R3 559 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 MARK2Q7KZI7 788 aaKnown RBP3.52□□□□□ -1.85
SMC6-208ENST00000481708 SLCO6A1Q86UG4 719 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 IRF2BP1Q8IU81 584 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 TMEM151BQ8IW70 566 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 CNTN4Q8IWV2 1026 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 VPS52Q8N1B4 723 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 AGBL3Q8NEM8 1001 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 CALML4Q96GE6 196 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 TCEANC2Q96MN5 208 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 LENG8Q96PV6 779 aaPredicted RBP3.52□□□□□ -1.85
SMC6-208ENST00000481708 SARS2Q9NP81 518 aaKnown RBP3.52□□□□□ -1.85
SMC6-208ENST00000481708 PLA2G3Q9NZ20 509 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 SELENONQ9NZV5 590 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 NYNRINQ9P2P1 1898 aaKnown RBP3.52□□□□□ -1.85
SMC6-208ENST00000481708 CCL27Q9Y4X3 112 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 ST20-MTHFSA0A0A6YYL1 179 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 NUDT19A8MXV4 375 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 E9PLN8 166 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 KLHL18O94889 574 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 CSF1RP07333 972 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 KLRC1P26715 233 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 ATP5DP30049 168 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 CLCN7P51798 805 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 EVCP57679 992 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 GBE1Q04446 702 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 NKAPLQ5M9Q1 402 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 ABLIM2Q6H8Q1 611 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 ANO7Q6IWH7 933 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 CYP20A1Q6UW02 462 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 NFKBIDQ8NI38 313 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 C3orf49Q96BT1 292 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 SDCCAG3Q96C92 435 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 CHFRQ96EP1 664 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 FEM1CQ96JP0 617 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 FAM167AQ96KS9 214 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 TEPSINQ96N21 525 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 RUNDC3BQ96NL0 473 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 GCNAQ96QF7 691 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 VKORC1Q9BQB6 163 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 WDCPQ9H6R7 721 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 POLR1BQ9H9Y6 1135 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 HEYLQ9NQ87 328 aaPredicted RBP3.52□□□□□ -1.85
SMC6-208ENST00000481708 LMCD1Q9NZU5 365 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 DNMT3BQ9UBC3 853 aaKnown RBP3.52□□□□□ -1.85
SMC6-208ENST00000481708 SH3BGRL2Q9UJC5 107 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 XDHP47989 1333 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 FRMD3A2A2Y4 597 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 ERICH4A6NGS2 130 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 ADM5C9JUS6 153 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 TNPO2O14787 897 aaKnown RBP3.52□□□□□ -1.85
SMC6-208ENST00000481708 SLCO2B1O94956 709 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 LARGE1O95461 756 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 IGLV1-40P01703 118 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 AFPP02771 609 aaKnown RBP3.52□□□□□ -1.85
SMC6-208ENST00000481708 GP5P40197 560 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 BUD31P41223 144 aaPredicted RBP3.52□□□□□ -1.85
SMC6-208ENST00000481708 DOC2BQ14184 412 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 DGKDQ16760 1214 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.52□□□□□ -1.85
SMC6-208ENST00000481708 MANEALQ5VSG8 457 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 CD276Q5ZPR3 534 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 ZNF790Q6PG37 636 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 SYNE3Q6ZMZ3 975 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 OSBPL1AQ9BXW6 950 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 MCOLN1Q9GZU1 580 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 CALCOCO1Q9P1Z2 691 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 FTSJ1Q9UET6 329 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 SARDHQ9UL12 918 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 PTRH2Q9Y3E5 179 aaKnown RBP3.52□□□□□ -1.85
SMC6-208ENST00000481708 TRPV2Q9Y5S1 764 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 PLXNA4Q9HCM2 1894 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 CCDC196A0A1B0GTZ2 297 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 LIPT2A6NK58 231 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 TMEM232C9JQI7 657 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 CER1O95813 267 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 APPP05067 770 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 SERPINB2P05120 415 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 ACP5P13686 325 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 MSH2P43246 934 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 SLC26A5P58743 744 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 NOMO3P69849 1222 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 RPP30P78346 268 aaKnown RBP3.51□□□□□ -1.85
SMC6-208ENST00000481708 KRT17Q04695 432 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 COG2Q14746 738 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 AACSQ86V21 672 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 SNX33Q8WV41 574 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 PWWP2AQ96N64 755 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 RBM15Q96T37 977 aaKnown RBP eCLIP3.51□□□□□ -1.85
SMC6-208ENST00000481708 MMADHCQ9H3L0 296 aaPredicted RBP3.51□□□□□ -1.85
SMC6-208ENST00000481708 PAK6Q9NQU5 681 aaPredicted RBP3.51□□□□□ -1.85
SMC6-208ENST00000481708 KMT2BQ9UMN6 2715 aaPredicted RBP3.51□□□□□ -1.85
SMC6-208ENST00000481708 TBC1D4O60343 1298 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms