RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 POLNQ7Z5Q5 900 aa10.4□□□□□ -0.74
COMMD4-203ENST00000480484 AMIGO2Q86SJ2 522 aa10.4□□□□□ -0.74
COMMD4-203ENST00000480484 CCDC60Q8IWA6 550 aaPredicted RBP10.4□□□□□ -0.74
COMMD4-203ENST00000480484 AFAP1L2Q8N4X5 818 aa10.4□□□□□ -0.74
COMMD4-203ENST00000480484 NKD2Q969F2 451 aaPredicted RBP10.4□□□□□ -0.74
COMMD4-203ENST00000480484 WRNIP1Q96S55 665 aa10.4□□□□□ -0.74
COMMD4-203ENST00000480484 XAB2Q9HCS7 855 aaKnown RBP10.4□□□□□ -0.74
COMMD4-203ENST00000480484 XPNPEP1Q9NQW7 623 aa10.4□□□□□ -0.74
COMMD4-203ENST00000480484 AP4B1Q9Y6B7 739 aa10.4□□□□□ -0.74
COMMD4-203ENST00000480484 MYO18AQ92614 2054 aaKnown RBP10.4□□□□□ -0.75
COMMD4-203ENST00000480484 CXorf49A8MYA2 514 aaPredicted RBP10.39□□□□□ -0.75
COMMD4-203ENST00000480484 KLF11O14901 512 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 HNRNPDLO14979 420 aaKnown RBP10.39□□□□□ -0.75
COMMD4-203ENST00000480484 PDPK1O15530 556 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 DNAJA2O60884 412 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 CST3P01034 146 aaPredicted RBP10.39□□□□□ -0.75
COMMD4-203ENST00000480484 SLC4A1P02730 911 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 SNRPAP09012 282 aaKnown RBP10.39□□□□□ -0.75
COMMD4-203ENST00000480484 CDKN2BP42772 138 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 EMP3P54852 163 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 MRPS5P82675 430 aaKnown RBP10.39□□□□□ -0.75
COMMD4-203ENST00000480484 DMP1Q13316 513 aaPredicted RBP10.39□□□□□ -0.75
COMMD4-203ENST00000480484 TMEM132BQ14DG7 1078 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 TBCCQ15814 346 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 PLEKHA7Q6IQ23 1121 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 GALNT5Q7Z7M9 940 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 VSIG10LQ86VR7 867 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 C12orf56Q8IXR9 622 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 ARFGAP1Q8N6T3 406 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 ZBTB8BQ8NAP8 495 aaPredicted RBP10.39□□□□□ -0.75
COMMD4-203ENST00000480484 LSM14AQ8ND56 463 aaKnown RBP10.39□□□□□ -0.75
COMMD4-203ENST00000480484 LRGUKQ96M69 825 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 FAM129BQ96TA1 746 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 BARD1Q99728 777 aaKnown RBP10.39□□□□□ -0.75
COMMD4-203ENST00000480484 TIMMDC1Q9NPL8 285 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 COMMD8Q9NX08 183 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 SEPT9Q9UHD8 586 aaPredicted RBP10.39□□□□□ -0.75
COMMD4-203ENST00000480484 COQ4Q9Y3A0 265 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 KIAA1217Q5T5P2 1943 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 SDR42E2A6NKP2 422 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 CCNT2O60583 730 aaKnown RBP10.39□□□□□ -0.75
COMMD4-203ENST00000480484 CSDE1O75534 798 aaKnown RBP10.39□□□□□ -0.75
COMMD4-203ENST00000480484 CRTAMO95727 393 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 MAPTP10636 758 aaKnown RBP10.39□□□□□ -0.75
COMMD4-203ENST00000480484 NELFEP18615 380 aaKnown RBP10.39□□□□□ -0.75
COMMD4-203ENST00000480484 ZNF280AP59817 542 aaPredicted RBP10.39□□□□□ -0.75
COMMD4-203ENST00000480484 XIAPP98170 497 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 SP2Q02086 613 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 GCNT1Q02742 428 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 SNAPC2Q13487 334 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 PDK1Q15118 436 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 MTERF2Q49AM1 385 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 VWA5B1Q5TIE3 1220 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 NXNQ6DKJ4 435 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 DNAJC24Q6P3W2 148 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 IGF2-ASQ6U949 168 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 SH2D5Q6ZV89 423 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 SLC26A11Q86WA9 606 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 MAP4K3Q8IVH8 894 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 HACE1Q8IYU2 909 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 FAM26EQ8N5C1 309 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 REPS2Q8NFH8 660 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 JADE3Q92613 823 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 TMEM143Q96AN5 459 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 BTBD9Q96Q07 612 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 YIPF2Q9BWQ6 316 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 CAAP1Q9H8G2 361 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 XPO1O14980 1071 aaKnown RBP10.39□□□□□ -0.75
COMMD4-203ENST00000480484 SIN3BO75182 1162 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 TNFAIP8O95379 198 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 AOC1P19801 751 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 TNFSF9P41273 254 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 JAK3P52333 1124 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 HDAC4P56524 1084 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 BACE1P56817 501 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 KRT76Q01546 638 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 LPIN1Q14693 890 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 ZC3H12BQ5HYM0 836 aaKnown RBP10.39□□□□□ -0.75
COMMD4-203ENST00000480484 C16orf46Q6P387 395 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 ABRAQ8N0Z2 381 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 SLC35B2Q8TB61 432 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 MRPS26Q9BYN8 205 aaKnown RBP10.39□□□□□ -0.75
COMMD4-203ENST00000480484 SENP6Q9GZR1 1112 aaPredicted RBP10.39□□□□□ -0.75
COMMD4-203ENST00000480484 PCDHA10Q9Y5I2 948 aa10.39□□□□□ -0.75
COMMD4-203ENST00000480484 NFASCO94856 1347 aa10.38□□□□□ -0.75
COMMD4-203ENST00000480484 A0A1B0GTW7 788 aa10.38□□□□□ -0.75
COMMD4-203ENST00000480484 TRIM64A6NGJ6 449 aa10.38□□□□□ -0.75
COMMD4-203ENST00000480484 TRIM64BA6NI03 449 aa10.38□□□□□ -0.75
COMMD4-203ENST00000480484 ITM2AO43736 263 aa10.38□□□□□ -0.75
COMMD4-203ENST00000480484 PTPRAP18433 802 aa10.38□□□□□ -0.75
COMMD4-203ENST00000480484 RAP1GAPP47736 663 aa10.38□□□□□ -0.75
COMMD4-203ENST00000480484 RPL10AP62906 217 aaKnown RBP10.38□□□□□ -0.75
COMMD4-203ENST00000480484 MRPS22P82650 360 aaKnown RBP10.38□□□□□ -0.75
COMMD4-203ENST00000480484 MYBPC1Q00872 1141 aa10.38□□□□□ -0.75
COMMD4-203ENST00000480484 SULT2A1Q06520 285 aa10.38□□□□□ -0.75
COMMD4-203ENST00000480484 TEX44Q53QW1 395 aa10.38□□□□□ -0.75
COMMD4-203ENST00000480484 USP37Q86T82 979 aa10.38□□□□□ -0.75
COMMD4-203ENST00000480484 JOSD2Q8TAC2 188 aa10.38□□□□□ -0.75
COMMD4-203ENST00000480484 ZFRQ96KR1 1074 aaKnown RBP10.38□□□□□ -0.75
COMMD4-203ENST00000480484 ZNF214Q9UL59 606 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms