RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 SLC12A6Q9UHW9 1150 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 VANGL2Q9ULK5 521 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 PYCARDQ9ULZ3 195 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 ALG6Q9Y672 507 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 MYOFQ9NZM1 2061 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 IGLV3-10A0A075B6K4 115 aa12.62□□□□□ -0.39
TRA2B-212ENST00000480461 GRID2IPA4D2P6 1211 aa12.62□□□□□ -0.39
TRA2B-212ENST00000480461 TBL1XO60907 577 aa12.62□□□□□ -0.39
TRA2B-212ENST00000480461 SRGAP2O75044 1071 aa12.62□□□□□ -0.39
TRA2B-212ENST00000480461 TULP3O75386 442 aa12.62□□□□□ -0.39
TRA2B-212ENST00000480461 IPO7O95373 1038 aaKnown RBP12.62□□□□□ -0.39
TRA2B-212ENST00000480461 MOCS3O95396 460 aa12.62□□□□□ -0.39
TRA2B-212ENST00000480461 COMTP21964 271 aa12.62□□□□□ -0.39
TRA2B-212ENST00000480461 IL4RP24394 825 aa12.62□□□□□ -0.39
TRA2B-212ENST00000480461 L1CAMP32004 1257 aa12.62□□□□□ -0.39
TRA2B-212ENST00000480461 ARSEP51690 589 aa12.62□□□□□ -0.39
TRA2B-212ENST00000480461 MLF2Q15773 248 aaPredicted RBP12.62□□□□□ -0.39
TRA2B-212ENST00000480461 MPPE1Q53F39 396 aa12.62□□□□□ -0.39
TRA2B-212ENST00000480461 TPRG1Q6ZUI0 275 aa12.62□□□□□ -0.39
TRA2B-212ENST00000480461 RALGPS2Q86X27 583 aaPredicted RBP12.62□□□□□ -0.39
TRA2B-212ENST00000480461 REXO1L1PQ8IX06 675 aa12.62□□□□□ -0.39
TRA2B-212ENST00000480461 LRRC57Q8N9N7 239 aa12.62□□□□□ -0.39
TRA2B-212ENST00000480461 DDI1Q8WTU0 396 aa12.62□□□□□ -0.39
TRA2B-212ENST00000480461 KCTD15Q96SI1 283 aaPredicted RBP12.62□□□□□ -0.39
TRA2B-212ENST00000480461 ZWILCHQ9H900 591 aa12.62□□□□□ -0.39
TRA2B-212ENST00000480461 TMEM51Q9NW97 253 aa12.62□□□□□ -0.39
TRA2B-212ENST00000480461 MPP6Q9NZW5 540 aa12.62□□□□□ -0.39
TRA2B-212ENST00000480461 STIM2Q9P246 746 aa12.62□□□□□ -0.39
TRA2B-212ENST00000480461 HCN2Q9UL51 889 aa12.62□□□□□ -0.39
TRA2B-212ENST00000480461 PPP2R2CQ9Y2T4 447 aa12.62□□□□□ -0.39
TRA2B-212ENST00000480461 ATRXP46100 2492 aa12.62□□□□□ -0.39
TRA2B-212ENST00000480461 A0A0A0MRY4 1105 aa12.61□□□□□ -0.39
TRA2B-212ENST00000480461 MACROD2A1Z1Q3 448 aa12.61□□□□□ -0.39
TRA2B-212ENST00000480461 E9PAM4 449 aa12.61□□□□□ -0.39
TRA2B-212ENST00000480461 PRPSAP2O60256 369 aa12.61□□□□□ -0.39
TRA2B-212ENST00000480461 CACNG3O60359 315 aa12.61□□□□□ -0.39
TRA2B-212ENST00000480461 LRIG2O94898 1065 aa12.61□□□□□ -0.39
TRA2B-212ENST00000480461 ADH1CP00326 375 aa12.61□□□□□ -0.39
TRA2B-212ENST00000480461 CD48P09326 243 aa12.61□□□□□ -0.39
TRA2B-212ENST00000480461 CHRM1P11229 460 aaPredicted RBP12.61□□□□□ -0.39
TRA2B-212ENST00000480461 MAN1A1P33908 653 aa12.61□□□□□ -0.39
TRA2B-212ENST00000480461 NRG1Q02297 640 aaPredicted RBP12.61□□□□□ -0.39
TRA2B-212ENST00000480461 KIF5AQ12840 1032 aa12.61□□□□□ -0.39
TRA2B-212ENST00000480461 NR1H3Q13133 447 aa12.61□□□□□ -0.39
TRA2B-212ENST00000480461 UBXN2BQ14CS0 331 aa12.61□□□□□ -0.39
TRA2B-212ENST00000480461 PON2Q15165 354 aa12.61□□□□□ -0.39
TRA2B-212ENST00000480461 SMTNL2Q2TAL5 461 aa12.61□□□□□ -0.39
TRA2B-212ENST00000480461 ARL13BQ3SXY8 428 aa12.61□□□□□ -0.39
TRA2B-212ENST00000480461 BOLA3Q53S33 107 aa12.61□□□□□ -0.39
TRA2B-212ENST00000480461 PPM1JQ5JR12 505 aa12.61□□□□□ -0.39
TRA2B-212ENST00000480461 MPP7Q5T2T1 576 aa12.61□□□□□ -0.39
TRA2B-212ENST00000480461 TMEM215Q68D42 235 aa12.61□□□□□ -0.39
TRA2B-212ENST00000480461 FSTL4Q6MZW2 842 aa12.61□□□□□ -0.39
TRA2B-212ENST00000480461 ZNF662Q6ZS27 426 aa12.61□□□□□ -0.39
TRA2B-212ENST00000480461 ANKS1BQ7Z6G8 1248 aa12.61□□□□□ -0.39
TRA2B-212ENST00000480461 CD101Q93033 1021 aa12.61□□□□□ -0.39
TRA2B-212ENST00000480461 DDX50Q9BQ39 737 aaKnown RBP12.61□□□□□ -0.39
TRA2B-212ENST00000480461 OSBPL6Q9BZF3 934 aa12.61□□□□□ -0.39
TRA2B-212ENST00000480461 IRX2Q9BZI1 471 aaPredicted RBP12.61□□□□□ -0.39
TRA2B-212ENST00000480461 C8orf33Q9H7E9 229 aaPredicted RBP12.61□□□□□ -0.39
TRA2B-212ENST00000480461 LUC7LQ9NQ29 371 aaKnown RBP12.61□□□□□ -0.39
TRA2B-212ENST00000480461 NDFIP2Q9NV92 336 aa12.61□□□□□ -0.39
TRA2B-212ENST00000480461 RALYQ9UKM9 306 aaKnown RBP12.61□□□□□ -0.39
TRA2B-212ENST00000480461 AP4E1Q9UPM8 1137 aa12.61□□□□□ -0.39
TRA2B-212ENST00000480461 TICRRQ7Z2Z1 1910 aa12.6□□□□□ -0.39
TRA2B-212ENST00000480461 PRRT4C9JH25 899 aa12.6□□□□□ -0.39
TRA2B-212ENST00000480461 F5H5T6 163 aa12.6□□□□□ -0.39
TRA2B-212ENST00000480461 K7EQS6 105 aa12.6□□□□□ -0.39
TRA2B-212ENST00000480461 CCDC175P0C221 793 aa12.6□□□□□ -0.39
TRA2B-212ENST00000480461 HLA-FP30511 346 aa12.6□□□□□ -0.39
TRA2B-212ENST00000480461 MAGEA9P43362 315 aa12.6□□□□□ -0.39
TRA2B-212ENST00000480461 PRKCQQ04759 706 aa12.6□□□□□ -0.39
TRA2B-212ENST00000480461 TMEM196Q5HYL7 178 aa12.6□□□□□ -0.39
TRA2B-212ENST00000480461 EMC10Q5UCC4 262 aa12.6□□□□□ -0.39
TRA2B-212ENST00000480461 CXorf57Q6NSI4 855 aaKnown RBP12.6□□□□□ -0.39
TRA2B-212ENST00000480461 KIAA0907Q7Z7F0 614 aaPredicted RBP12.6□□□□□ -0.39
TRA2B-212ENST00000480461 NLRP14Q86W24 1093 aa12.6□□□□□ -0.39
TRA2B-212ENST00000480461 CCAR2Q8N163 923 aaKnown RBP12.6□□□□□ -0.39
TRA2B-212ENST00000480461 FIBINQ8TAL6 211 aa12.6□□□□□ -0.39
TRA2B-212ENST00000480461 FAM71BQ8TC56 605 aa12.6□□□□□ -0.39
TRA2B-212ENST00000480461 FAM3CQ92520 227 aa12.6□□□□□ -0.39
TRA2B-212ENST00000480461 RAPGEF5Q92565 580 aa12.6□□□□□ -0.39
TRA2B-212ENST00000480461 TSC1Q92574 1164 aa12.6□□□□□ -0.39
TRA2B-212ENST00000480461 HSPH1Q92598 858 aa12.6□□□□□ -0.39
TRA2B-212ENST00000480461 ALG14Q96F25 216 aa12.6□□□□□ -0.39
TRA2B-212ENST00000480461 RPRD1AQ96P16 312 aaPredicted RBP12.6□□□□□ -0.39
TRA2B-212ENST00000480461 P2RY13Q9BPV8 354 aa12.6□□□□□ -0.39
TRA2B-212ENST00000480461 DHX35Q9H5Z1 703 aaKnown RBP12.6□□□□□ -0.39
TRA2B-212ENST00000480461 LTB4R2Q9NPC1 389 aa12.6□□□□□ -0.39
TRA2B-212ENST00000480461 LZTFL1Q9NQ48 299 aa12.6□□□□□ -0.39
TRA2B-212ENST00000480461 PRMT8Q9NR22 394 aaPredicted RBP12.6□□□□□ -0.39
TRA2B-212ENST00000480461 DNAJC17Q9NVM6 304 aaKnown RBP12.6□□□□□ -0.39
TRA2B-212ENST00000480461 CWC15Q9P013 229 aaKnown RBP12.6□□□□□ -0.39
TRA2B-212ENST00000480461 INTS6Q9UL03 887 aaKnown RBP12.6□□□□□ -0.39
TRA2B-212ENST00000480461 GUCA1BQ9UMX6 200 aa12.6□□□□□ -0.39
TRA2B-212ENST00000480461 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRA2B-212ENST00000480461 CAPN6Q9Y6Q1 641 aa12.6□□□□□ -0.39
TRA2B-212ENST00000480461 FAM208BQ5VWN6 2430 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 C3orf70A6NLC5 250 aaPredicted RBP12.59□□□□□ -0.39
TRA2B-212ENST00000480461 FAM170BA6NMN3 283 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms