RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 STK40Q8N2I9 435 aa17.98■□□□□ 0.47
HMGN1-212ENST00000479586 IQUBQ8NA54 791 aa17.98■□□□□ 0.47
HMGN1-212ENST00000479586 OR4C6Q8NH72 309 aa17.98■□□□□ 0.47
HMGN1-212ENST00000479586 MYEOVQ96EZ4 313 aa17.98■□□□□ 0.47
HMGN1-212ENST00000479586 PRICKLE1Q96MT3 831 aaPredicted RBP17.98■□□□□ 0.47
HMGN1-212ENST00000479586 THSD1Q9NS62 852 aa17.98■□□□□ 0.47
HMGN1-212ENST00000479586 TPX2Q9ULW0 747 aaKnown RBP17.98■□□□□ 0.47
HMGN1-212ENST00000479586 ERVW-1Q9UQF0 538 aa17.98■□□□□ 0.47
HMGN1-212ENST00000479586 EDDM13A0A1B0GTR0 161 aa17.97■□□□□ 0.47
HMGN1-212ENST00000479586 TARSL2A2RTX5 802 aaKnown RBP17.97■□□□□ 0.47
HMGN1-212ENST00000479586 YJEFN3A6XGL0 299 aa17.97■□□□□ 0.47
HMGN1-212ENST00000479586 E7ENQ6 273 aa17.97■□□□□ 0.47
HMGN1-212ENST00000479586 ADH1BP00325 375 aa17.97■□□□□ 0.47
HMGN1-212ENST00000479586 NR3C1P04150 777 aa17.97■□□□□ 0.47
HMGN1-212ENST00000479586 TRIM49P0CI25 452 aa17.97■□□□□ 0.47
HMGN1-212ENST00000479586 TRIM49CP0CI26 452 aa17.97■□□□□ 0.47
HMGN1-212ENST00000479586 C5AR1P21730 350 aa17.97■□□□□ 0.47
HMGN1-212ENST00000479586 DGKAP23743 735 aa17.97■□□□□ 0.47
HMGN1-212ENST00000479586 MZF1P28698 734 aaPredicted RBP17.97■□□□□ 0.47
HMGN1-212ENST00000479586 DRD3P35462 400 aa17.97■□□□□ 0.47
HMGN1-212ENST00000479586 BSPRYQ5W0U4 402 aa17.97■□□□□ 0.47
HMGN1-212ENST00000479586 CEP135Q66GS9 1140 aa17.97■□□□□ 0.47
HMGN1-212ENST00000479586 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.97■□□□□ 0.47
HMGN1-212ENST00000479586 PRPF39Q86UA1 669 aaKnown RBP17.97■□□□□ 0.47
HMGN1-212ENST00000479586 IQCHQ86VS3 1027 aa17.97■□□□□ 0.47
HMGN1-212ENST00000479586 SLC4A11Q8NBS3 891 aa17.97■□□□□ 0.47
HMGN1-212ENST00000479586 FIBINQ8TAL6 211 aa17.97■□□□□ 0.47
HMGN1-212ENST00000479586 IL17BQ9UHF5 180 aa17.97■□□□□ 0.47
HMGN1-212ENST00000479586 CYTH4Q9UIA0 394 aa17.97■□□□□ 0.47
HMGN1-212ENST00000479586 SLCO3A1Q9UIG8 710 aa17.97■□□□□ 0.47
HMGN1-212ENST00000479586 DOPEY2Q9Y3R5 2298 aa17.97■□□□□ 0.47
HMGN1-212ENST00000479586 TEX15Q9BXT5 2789 aa17.96■□□□□ 0.47
HMGN1-212ENST00000479586 A0A1W2PNU3 283 aaPredicted RBP17.96■□□□□ 0.47
HMGN1-212ENST00000479586 MAGEC1O60732 1142 aa17.96■□□□□ 0.47
HMGN1-212ENST00000479586 IL1BP01584 269 aa17.96■□□□□ 0.47
HMGN1-212ENST00000479586 CKMT1AP12532 417 aa17.96■□□□□ 0.47
HMGN1-212ENST00000479586 GCLMP48507 274 aa17.96■□□□□ 0.47
HMGN1-212ENST00000479586 RAD23BP54727 409 aa17.96■□□□□ 0.47
HMGN1-212ENST00000479586 ADIGQ0VDE8 80 aa17.96■□□□□ 0.47
HMGN1-212ENST00000479586 OVGP1Q12889 678 aa17.96■□□□□ 0.47
HMGN1-212ENST00000479586 NFATC3Q12968 1075 aa17.96■□□□□ 0.47
HMGN1-212ENST00000479586 CUL4BQ13620 913 aa17.96■□□□□ 0.47
HMGN1-212ENST00000479586 C8orf34Q49A92 452 aa17.96■□□□□ 0.47
HMGN1-212ENST00000479586 FSCBQ5H9T9 825 aa17.96■□□□□ 0.47
HMGN1-212ENST00000479586 PITRM1Q5JRX3 1037 aa17.96■□□□□ 0.47
HMGN1-212ENST00000479586 ARHGAP17Q68EM7 881 aa17.96■□□□□ 0.47
HMGN1-212ENST00000479586 NADSYN1Q6IA69 706 aa17.96■□□□□ 0.47
HMGN1-212ENST00000479586 CARNMT1Q8N4J0 409 aa17.96■□□□□ 0.47
HMGN1-212ENST00000479586 ANKRD52Q8NB46 1076 aa17.96■□□□□ 0.47
HMGN1-212ENST00000479586 KDM1BQ8NB78 822 aa17.96■□□□□ 0.47
HMGN1-212ENST00000479586 TMEM174Q8WUU8 243 aa17.96■□□□□ 0.47
HMGN1-212ENST00000479586 TATDN2Q93075 761 aa17.96■□□□□ 0.47
HMGN1-212ENST00000479586 DNAI2Q9GZS0 605 aa17.96■□□□□ 0.47
HMGN1-212ENST00000479586 OSBPL2Q9H1P3 480 aa17.96■□□□□ 0.47
HMGN1-212ENST00000479586 ITIH6Q6UXX5 1313 aa17.96■□□□□ 0.46
HMGN1-212ENST00000479586 TDRD6O60522 2096 aaKnown RBP17.95■□□□□ 0.46
HMGN1-212ENST00000479586 BSNQ9UPA5 3926 aa17.95■□□□□ 0.46
HMGN1-212ENST00000479586 TLN1Q9Y490 2541 aaKnown RBP17.95■□□□□ 0.46
HMGN1-212ENST00000479586 PVALEFA0A1B0GWK0 134 aa17.95■□□□□ 0.46
HMGN1-212ENST00000479586 IRAK2O43187 625 aa17.95■□□□□ 0.46
HMGN1-212ENST00000479586 RTN2O75298 545 aa17.95■□□□□ 0.46
HMGN1-212ENST00000479586 IGLV3-27P01718 113 aa17.95■□□□□ 0.46
HMGN1-212ENST00000479586 GIMD1P0DJR0 217 aa17.95■□□□□ 0.46
HMGN1-212ENST00000479586 VAV1P15498 845 aa17.95■□□□□ 0.46
HMGN1-212ENST00000479586 PDCP20941 246 aa17.95■□□□□ 0.46
HMGN1-212ENST00000479586 NASPP49321 788 aaPredicted RBP17.95■□□□□ 0.46
HMGN1-212ENST00000479586 VAMP7P51809 220 aa17.95■□□□□ 0.46
HMGN1-212ENST00000479586 RPS24P62847 133 aaKnown RBP17.95■□□□□ 0.46
HMGN1-212ENST00000479586 PPP3CAQ08209 521 aa17.95■□□□□ 0.46
HMGN1-212ENST00000479586 STAT4Q14765 748 aa17.95■□□□□ 0.46
HMGN1-212ENST00000479586 STK38Q15208 465 aa17.95■□□□□ 0.46
HMGN1-212ENST00000479586 GOLGA7BQ2TAP0 167 aa17.95■□□□□ 0.46
HMGN1-212ENST00000479586 POM121L1PQ3SYA9 428 aa17.95■□□□□ 0.46
HMGN1-212ENST00000479586 HS1BP3Q53T59 392 aa17.95■□□□□ 0.46
HMGN1-212ENST00000479586 C3orf38Q5JPI3 329 aa17.95■□□□□ 0.46
HMGN1-212ENST00000479586 SHC4Q6S5L8 630 aa17.95■□□□□ 0.46
HMGN1-212ENST00000479586 ZNF557Q8N988 423 aaPredicted RBP17.95■□□□□ 0.46
HMGN1-212ENST00000479586 HJURPQ8NCD3 748 aaPredicted RBP17.95■□□□□ 0.46
HMGN1-212ENST00000479586 LINC00301Q8NCQ3 95 aa17.95■□□□□ 0.46
HMGN1-212ENST00000479586 KIAA0895Q8NCT3 520 aa17.95■□□□□ 0.46
HMGN1-212ENST00000479586 PTPRN2Q92932 1015 aa17.95■□□□□ 0.46
HMGN1-212ENST00000479586 IPO9Q96P70 1041 aaKnown RBP17.95■□□□□ 0.46
HMGN1-212ENST00000479586 KCTD10Q9H3F6 313 aa17.95■□□□□ 0.46
HMGN1-212ENST00000479586 MMRN2Q9H8L6 949 aa17.95■□□□□ 0.46
HMGN1-212ENST00000479586 CISHQ9NSE2 258 aa17.95■□□□□ 0.46
HMGN1-212ENST00000479586 SATB2Q9UPW6 733 aa17.95■□□□□ 0.46
HMGN1-212ENST00000479586 DMTF1Q9Y222 760 aa17.95■□□□□ 0.46
HMGN1-212ENST00000479586 LY6G6EA0A0G2JKS1 128 aa17.94■□□□□ 0.46
HMGN1-212ENST00000479586 ACSL4O60488 711 aa17.94■□□□□ 0.46
HMGN1-212ENST00000479586 SRPRAP08240 638 aaKnown RBP17.94■□□□□ 0.46
HMGN1-212ENST00000479586 SYT1P21579 422 aa17.94■□□□□ 0.46
HMGN1-212ENST00000479586 SLC11A2P49281 568 aa17.94■□□□□ 0.46
HMGN1-212ENST00000479586 STK19P49842 368 aaPredicted RBP17.94■□□□□ 0.46
HMGN1-212ENST00000479586 SLC8A3P57103 927 aa17.94■□□□□ 0.46
HMGN1-212ENST00000479586 SKOR1P84550 965 aa17.94■□□□□ 0.46
HMGN1-212ENST00000479586 STK4Q13043 487 aa17.94■□□□□ 0.46
HMGN1-212ENST00000479586 CDH18Q13634 790 aa17.94■□□□□ 0.46
HMGN1-212ENST00000479586 KMT5BQ4FZB7 885 aa17.94■□□□□ 0.46
HMGN1-212ENST00000479586 COLEC12Q5KU26 742 aa17.94■□□□□ 0.46
HMGN1-212ENST00000479586 GRAMD1CQ8IYS0 662 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms