RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 GBE1Q04446 702 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 SLC10A2Q12908 348 aaPredicted RBP13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 TTLL4Q14679 1199 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 KIZQ2M2Z5 673 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 SLC9B1Q4ZJI4 515 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 FAM47CQ5HY64 1035 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 PPM1LQ5SGD2 360 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 IYDQ6PHW0 289 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 ERO1BQ86YB8 467 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 NDRG1Q92597 394 aaKnown RBP13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 CMTM5Q96DZ9 223 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 PPP1R36Q96LQ0 422 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 RBM38Q9H0Z9 239 aaKnown RBP13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 NRDE2Q9H7Z3 1164 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 PCDHA11Q9Y5I1 949 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 SNX9Q9Y5X1 595 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 PTPRFP10586 1907 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 LOC285556D6RIA3 1793 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 PAPSS1O43252 624 aaPredicted RBP13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 PRPSAP2O60256 369 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 CRTAMO95727 393 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 SLC25A27O95847 323 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 SERPINE1P05121 402 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 COX4I1P13073 169 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 RGS2P41220 211 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 RPL5P46777 297 aaKnown RBP13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 MYBPC1Q00872 1141 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 CASC4Q6P4E1 433 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 LCLAT1Q6UWP7 414 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 TIFABQ6ZNK6 161 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 PQLC1Q8N2U9 271 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 MARVELD2Q8N4S9 558 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 RNF148Q8N7C7 305 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 LINC01465Q8N7H1 131 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 LENG8Q96PV6 779 aaPredicted RBP13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 BTBD9Q96Q07 612 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 EPB41L1Q9H4G0 881 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 PCDH18Q9HCL0 1135 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 XPNPEP3Q9NQH7 507 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 DNAAF2Q9NVR5 837 aaKnown RBP13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 PTTG2Q9NZH5 202 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 TUBGCP4Q9UGJ1 667 aa13.65□□□□□ -0.22
PDZRN3-208ENST00000479530 APOL1O14791 398 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 MAGEA6P43360 314 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 MRPS22P82650 360 aaKnown RBP13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 CBLBQ13191 982 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 C1QTNF12Q5T7M4 302 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 ZNF618Q5T7W0 954 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 OLFML1Q6UWY5 402 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 C7orf31Q8N865 590 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 ZNF781Q8N8C0 355 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 PRPF18Q99633 342 aaKnown RBP13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 C16orf70Q9BSU1 422 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 SNRNP25Q9BV90 132 aaKnown RBP13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 COG4Q9H9E3 785 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 SNTG2Q9NY99 539 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 BCLAF3A2AJT9 711 aaKnown RBP13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 AIM2O14862 343 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 PEX1O43933 1283 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 PDGFRBP09619 1106 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 SERPINB5P36952 375 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 IREB2P48200 963 aaKnown RBP13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 HDAC4P56524 1084 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 CNGA3Q16281 694 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 MARCH8Q5T0T0 291 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 C6orf52Q5T4I8 152 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 CES3Q6UWW8 571 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 PACS1Q6VY07 963 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 NAPRTQ6XQN6 538 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 CMC1Q7Z7K0 106 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 LILRA2Q8N149 483 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 APBB2Q92870 758 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 OR52B2Q96RD2 323 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 SIKE1Q9BRV8 207 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 NT5C1AQ9BXI3 368 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 EIF2AQ9BY44 585 aaKnown RBP13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 SENP6Q9GZR1 1112 aaPredicted RBP13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 DNAJC28Q9NX36 388 aa13.64□□□□□ -0.23
PDZRN3-208ENST00000479530 GOLGA8QA0A0J9YX86 632 aa13.63□□□□□ -0.23
PDZRN3-208ENST00000479530 GOLGA8OA6NCC3 632 aa13.63□□□□□ -0.23
PDZRN3-208ENST00000479530 GOLGA8NF8WBI6 632 aa13.63□□□□□ -0.23
PDZRN3-208ENST00000479530 DENRO43583 198 aaKnown RBP13.63□□□□□ -0.23
PDZRN3-208ENST00000479530 FAM163BP0C2L3 166 aa13.63□□□□□ -0.23
PDZRN3-208ENST00000479530 SERPINB9P50453 376 aa13.63□□□□□ -0.23
PDZRN3-208ENST00000479530 ABCE1P61221 599 aaKnown RBP13.63□□□□□ -0.23
PDZRN3-208ENST00000479530 RBP5P82980 135 aa13.63□□□□□ -0.23
PDZRN3-208ENST00000479530 CDKL1Q00532 357 aa13.63□□□□□ -0.23
PDZRN3-208ENST00000479530 INCA1Q0VD86 236 aa13.63□□□□□ -0.23
PDZRN3-208ENST00000479530 KLF10Q13118 480 aa13.63□□□□□ -0.23
PDZRN3-208ENST00000479530 B3GNT6Q6ZMB0 384 aa13.63□□□□□ -0.23
PDZRN3-208ENST00000479530 PYROXD2Q8N2H3 581 aa13.63□□□□□ -0.23
PDZRN3-208ENST00000479530 MCUQ8NE86 351 aa13.63□□□□□ -0.23
PDZRN3-208ENST00000479530 ADAM32Q8TC27 787 aa13.63□□□□□ -0.23
PDZRN3-208ENST00000479530 PPP4R1Q8TF05 950 aa13.63□□□□□ -0.23
PDZRN3-208ENST00000479530 LRRC39Q96DD0 335 aa13.63□□□□□ -0.23
PDZRN3-208ENST00000479530 ATXN7L3BQ96GX2 97 aa13.63□□□□□ -0.23
PDZRN3-208ENST00000479530 FRMD8Q9BZ67 464 aaPredicted RBP13.63□□□□□ -0.23
PDZRN3-208ENST00000479530 ASB7Q9H672 318 aa13.63□□□□□ -0.23
PDZRN3-208ENST00000479530 VRTNQ9H8Y1 702 aa13.63□□□□□ -0.23
PDZRN3-208ENST00000479530 CYP3A43Q9HB55 503 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms