RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 FUT11Q495W5 492 aa21.1■□□□□ 0.97
VARS-224ENST00000479051 FSCBQ5H9T9 825 aa21.1■□□□□ 0.97
VARS-224ENST00000479051 PITRM1Q5JRX3 1037 aa21.1■□□□□ 0.97
VARS-224ENST00000479051 TMEM215Q68D42 235 aa21.1■□□□□ 0.97
VARS-224ENST00000479051 SERPINA13PQ6UXR4 307 aa21.1■□□□□ 0.97
VARS-224ENST00000479051 H2AFVQ71UI9 128 aa21.1■□□□□ 0.97
VARS-224ENST00000479051 ADIPOR2Q86V24 386 aa21.1■□□□□ 0.97
VARS-224ENST00000479051 WDR5BQ86VZ2 330 aa21.1■□□□□ 0.97
VARS-224ENST00000479051 CCDC185Q8N715 623 aa21.1■□□□□ 0.97
VARS-224ENST00000479051 ZBTB44Q8NCP5 570 aa21.1■□□□□ 0.97
VARS-224ENST00000479051 FAM122AQ96E09 287 aa21.1■□□□□ 0.97
VARS-224ENST00000479051 ACOX2Q99424 681 aa21.1■□□□□ 0.97
VARS-224ENST00000479051 NUP85Q9BW27 656 aa21.1■□□□□ 0.97
VARS-224ENST00000479051 POLR3BQ9NW08 1133 aaPredicted RBP21.1■□□□□ 0.97
VARS-224ENST00000479051 CACNA2D2Q9NY47 1150 aa21.1■□□□□ 0.97
VARS-224ENST00000479051 PPARGC1AQ9UBK2 798 aaKnown RBP21.1■□□□□ 0.97
VARS-224ENST00000479051 HCN2Q9UL51 889 aa21.1■□□□□ 0.97
VARS-224ENST00000479051 NENFQ9UMX5 172 aa21.1■□□□□ 0.97
VARS-224ENST00000479051 STON1Q9Y6Q2 735 aa21.1■□□□□ 0.97
VARS-224ENST00000479051 DRGXA6NNA5 263 aa21.09■□□□□ 0.97
VARS-224ENST00000479051 GOLGA6L6A8MZA4 724 aa21.09■□□□□ 0.97
VARS-224ENST00000479051 SYNCRIPO60506 623 aaKnown RBP21.09■□□□□ 0.97
VARS-224ENST00000479051 CNR2P34972 360 aa21.09■□□□□ 0.97
VARS-224ENST00000479051 ST8SIA6P61647 398 aa21.09■□□□□ 0.97
VARS-224ENST00000479051 PIGHQ14442 188 aaPredicted RBP21.09■□□□□ 0.97
VARS-224ENST00000479051 ZNF234Q14588 700 aa21.09■□□□□ 0.97
VARS-224ENST00000479051 FNDC3BQ53EP0 1204 aaKnown RBP21.09■□□□□ 0.97
VARS-224ENST00000479051 C6orf118Q5T5N4 469 aa21.09■□□□□ 0.97
VARS-224ENST00000479051 RNF219Q5W0B1 726 aaPredicted RBP21.09■□□□□ 0.97
VARS-224ENST00000479051 TMEM92Q6UXU6 159 aa21.09■□□□□ 0.97
VARS-224ENST00000479051 SETD3Q86TU7 594 aaPredicted RBP21.09■□□□□ 0.97
VARS-224ENST00000479051 ZNF683Q8IZ20 524 aa21.09■□□□□ 0.97
VARS-224ENST00000479051 SORCS1Q8WY21 1168 aa21.09■□□□□ 0.97
VARS-224ENST00000479051 TTC17Q96AE7 1141 aa21.09■□□□□ 0.97
VARS-224ENST00000479051 LMLNQ96KR4 655 aa21.09■□□□□ 0.97
VARS-224ENST00000479051 ZYG11BQ9C0D3 744 aa21.09■□□□□ 0.97
VARS-224ENST00000479051 RETREG1Q9H6L5 497 aa21.09■□□□□ 0.97
VARS-224ENST00000479051 BCCIPQ9P287 314 aaKnown RBP eCLIP21.09■□□□□ 0.97
VARS-224ENST00000479051 EBF1Q9UH73 591 aa21.09■□□□□ 0.97
VARS-224ENST00000479051 IP6K2Q9UHH9 426 aa21.09■□□□□ 0.97
VARS-224ENST00000479051 ANAPC7Q9UJX3 599 aa21.09■□□□□ 0.97
VARS-224ENST00000479051 R4GN57 208 aa21.09■□□□□ 0.97
VARS-224ENST00000479051 MYO18AQ92614 2054 aaKnown RBP21.09■□□□□ 0.97
VARS-224ENST00000479051 WDFY4Q6ZS81 3184 aa21.09■□□□□ 0.97
VARS-224ENST00000479051 AXIN1O15169 862 aa21.08■□□□□ 0.97
VARS-224ENST00000479051 PRPSAP2O60256 369 aa21.08■□□□□ 0.97
VARS-224ENST00000479051 RHOCP08134 193 aa21.08■□□□□ 0.97
VARS-224ENST00000479051 CSKP41240 450 aa21.08■□□□□ 0.97
VARS-224ENST00000479051 SULT2A1Q06520 285 aa21.08■□□□□ 0.97
VARS-224ENST00000479051 PLEKHG6Q3KR16 790 aa21.08■□□□□ 0.97
VARS-224ENST00000479051 ALFQ53S48 1182 aa21.08■□□□□ 0.97
VARS-224ENST00000479051 ANO7Q6IWH7 933 aa21.08■□□□□ 0.97
VARS-224ENST00000479051 RWDD4Q6NW29 188 aaKnown RBP21.08■□□□□ 0.97
VARS-224ENST00000479051 CYB5D2Q8WUJ1 264 aa21.08■□□□□ 0.97
VARS-224ENST00000479051 TBC1D31Q96DN5 1066 aa21.08■□□□□ 0.97
VARS-224ENST00000479051 PANX2Q96RD6 677 aa21.08■□□□□ 0.97
VARS-224ENST00000479051 EPAS1Q99814 870 aa21.08■□□□□ 0.97
VARS-224ENST00000479051 CTTNBP2NLQ9P2B4 639 aa21.08■□□□□ 0.97
VARS-224ENST00000479051 UVRAGQ9P2Y5 699 aa21.08■□□□□ 0.97
VARS-224ENST00000479051 LCMT1Q9UIC8 334 aa21.08■□□□□ 0.97
VARS-224ENST00000479051 FZD10Q9ULW2 581 aa21.08■□□□□ 0.97
VARS-224ENST00000479051 TBC1D30Q9Y2I9 924 aa21.08■□□□□ 0.97
VARS-224ENST00000479051 TCRBV21S2A2A0A5A6 115 aa21.07■□□□□ 0.96
VARS-224ENST00000479051 MYO1FO00160 1098 aa21.07■□□□□ 0.96
VARS-224ENST00000479051 CNTN5O94779 1100 aa21.07■□□□□ 0.96
VARS-224ENST00000479051 TMEM253P0C7T8 217 aa21.07■□□□□ 0.96
VARS-224ENST00000479051 CDC25BP30305 580 aa21.07■□□□□ 0.96
VARS-224ENST00000479051 OR1E1P30953 314 aa21.07■□□□□ 0.96
VARS-224ENST00000479051 L1CAMP32004 1257 aa21.07■□□□□ 0.96
VARS-224ENST00000479051 IL12RB1P42701 662 aa21.07■□□□□ 0.96
VARS-224ENST00000479051 PXNP49023 591 aaPredicted RBP21.07■□□□□ 0.96
VARS-224ENST00000479051 IRAK1P51617 712 aa21.07■□□□□ 0.96
VARS-224ENST00000479051 DMWDQ09019 674 aa21.07■□□□□ 0.96
VARS-224ENST00000479051 ZNF252P-AS1Q0IIN9 211 aa21.07■□□□□ 0.96
VARS-224ENST00000479051 ENPP2Q13822 863 aa21.07■□□□□ 0.96
VARS-224ENST00000479051 CXorf57Q6NSI4 855 aaKnown RBP21.07■□□□□ 0.96
VARS-224ENST00000479051 PGBD3Q8N328 593 aa21.07■□□□□ 0.96
VARS-224ENST00000479051 ARHGEF26Q96DR7 871 aa21.07■□□□□ 0.96
VARS-224ENST00000479051 TRIM7Q9C029 511 aa21.07■□□□□ 0.96
VARS-224ENST00000479051 MUC3BQ9H195 1237 aa21.07■□□□□ 0.96
VARS-224ENST00000479051 SPTLC3Q9NUV7 552 aa21.07■□□□□ 0.96
VARS-224ENST00000479051 MPP6Q9NZW5 540 aa21.07■□□□□ 0.96
VARS-224ENST00000479051 EIF3CLB5ME19 914 aaKnown RBP21.06■□□□□ 0.96
VARS-224ENST00000479051 LILRB5O75023 590 aa21.06■□□□□ 0.96
VARS-224ENST00000479051 EPHX1P07099 455 aa21.06■□□□□ 0.96
VARS-224ENST00000479051 SRPRAP08240 638 aaKnown RBP21.06■□□□□ 0.96
VARS-224ENST00000479051 RHOQP17081 205 aa21.06■□□□□ 0.96
VARS-224ENST00000479051 PCK1P35558 622 aa21.06■□□□□ 0.96
VARS-224ENST00000479051 NNMTP40261 264 aa21.06■□□□□ 0.96
VARS-224ENST00000479051 PLK1P53350 603 aa21.06■□□□□ 0.96
VARS-224ENST00000479051 ECT2LQ008S8 904 aa21.06■□□□□ 0.96
VARS-224ENST00000479051 ZNF783Q6ZMS7 281 aa21.06■□□□□ 0.96
VARS-224ENST00000479051 TFAP2DQ7Z6R9 452 aa21.06■□□□□ 0.96
VARS-224ENST00000479051 RASSF3Q86WH2 238 aa21.06■□□□□ 0.96
VARS-224ENST00000479051 CCDC170Q8IYT3 715 aa21.06■□□□□ 0.96
VARS-224ENST00000479051 KDM1BQ8NB78 822 aa21.06■□□□□ 0.96
VARS-224ENST00000479051 ZNF564Q8TBZ8 553 aaPredicted RBP21.06■□□□□ 0.96
VARS-224ENST00000479051 HMGB4Q8WW32 186 aa21.06■□□□□ 0.96
VARS-224ENST00000479051 EIF3CQ99613 913 aaKnown RBP21.06■□□□□ 0.96
VARS-224ENST00000479051 LUC7LQ9NQ29 371 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms