RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 SORCS3Q9UPU3 1222 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 ESYT3A0FGR9 886 aa17.39■□□□□ 0.37
EPHB4-204ENST00000477446 ZSCAN5CA6NGD5 496 aaPredicted RBP17.39■□□□□ 0.37
EPHB4-204ENST00000477446 OTOL1A6NHN0 477 aaPredicted RBP17.39■□□□□ 0.37
EPHB4-204ENST00000477446 SLC6A4P31645 630 aa17.39■□□□□ 0.37
EPHB4-204ENST00000477446 CHKAP35790 457 aa17.39■□□□□ 0.37
EPHB4-204ENST00000477446 CETN2P41208 172 aa17.39■□□□□ 0.37
EPHB4-204ENST00000477446 VCPP55072 806 aaKnown RBP17.39■□□□□ 0.37
EPHB4-204ENST00000477446 MTA1Q13330 715 aa17.39■□□□□ 0.37
EPHB4-204ENST00000477446 MS4A13Q5J8X5 152 aa17.39■□□□□ 0.37
EPHB4-204ENST00000477446 RAP1GAP2Q684P5 730 aa17.39■□□□□ 0.37
EPHB4-204ENST00000477446 DUPD1Q68J44 220 aa17.39■□□□□ 0.37
EPHB4-204ENST00000477446 RHBDF2Q6PJF5 856 aa17.39■□□□□ 0.37
EPHB4-204ENST00000477446 LRIG3Q6UXM1 1119 aa17.39■□□□□ 0.37
EPHB4-204ENST00000477446 CYP4V2Q6ZWL3 525 aaPredicted RBP17.39■□□□□ 0.37
EPHB4-204ENST00000477446 RHOT1Q8IXI2 618 aa17.39■□□□□ 0.37
EPHB4-204ENST00000477446 CPXM2Q8N436 756 aa17.39■□□□□ 0.37
EPHB4-204ENST00000477446 PRELID2Q8N945 189 aa17.39■□□□□ 0.37
EPHB4-204ENST00000477446 NTAN1Q96AB6 310 aa17.39■□□□□ 0.37
EPHB4-204ENST00000477446 HAPLN3Q96S86 360 aa17.39■□□□□ 0.37
EPHB4-204ENST00000477446 SIK2Q9H0K1 926 aa17.39■□□□□ 0.37
EPHB4-204ENST00000477446 GTSE1Q9NYZ3 720 aa17.39■□□□□ 0.37
EPHB4-204ENST00000477446 HS3ST4Q9Y661 456 aa17.39■□□□□ 0.37
EPHB4-204ENST00000477446 A6NNZ2 444 aa17.38■□□□□ 0.37
EPHB4-204ENST00000477446 TRDMT1O14717 391 aaKnown RBP17.38■□□□□ 0.37
EPHB4-204ENST00000477446 PRPSAP2O60256 369 aa17.38■□□□□ 0.37
EPHB4-204ENST00000477446 SRFP11831 508 aa17.38■□□□□ 0.37
EPHB4-204ENST00000477446 IL1R2P27930 398 aa17.38■□□□□ 0.37
EPHB4-204ENST00000477446 MARCKSL1P49006 195 aa17.38■□□□□ 0.37
EPHB4-204ENST00000477446 MLLT6P55198 1093 aaPredicted RBP17.38■□□□□ 0.37
EPHB4-204ENST00000477446 RUNX3Q13761 415 aa17.38■□□□□ 0.37
EPHB4-204ENST00000477446 TUBB8Q3ZCM7 444 aa17.38■□□□□ 0.37
EPHB4-204ENST00000477446 RFWD3Q6PCD5 774 aa17.38■□□□□ 0.37
EPHB4-204ENST00000477446 TPGS1Q6ZTW0 290 aa17.38■□□□□ 0.37
EPHB4-204ENST00000477446 ZNF771Q7L3S4 317 aaPredicted RBP17.38■□□□□ 0.37
EPHB4-204ENST00000477446 TMEM25Q86YD3 366 aa17.38■□□□□ 0.37
EPHB4-204ENST00000477446 UHRF1Q96T88 793 aaPredicted RBP17.38■□□□□ 0.37
EPHB4-204ENST00000477446 PRMT1Q99873 361 aaKnown RBP17.38■□□□□ 0.37
EPHB4-204ENST00000477446 MAGEB5Q9BZ81 275 aa17.38■□□□□ 0.37
EPHB4-204ENST00000477446 LRRC19Q9H756 370 aa17.38■□□□□ 0.37
EPHB4-204ENST00000477446 ECT2Q9H8V3 914 aa17.38■□□□□ 0.37
EPHB4-204ENST00000477446 SPHK2Q9NRA0 654 aa17.38■□□□□ 0.37
EPHB4-204ENST00000477446 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.38■□□□□ 0.37
EPHB4-204ENST00000477446 FZD10Q9ULW2 581 aa17.38■□□□□ 0.37
EPHB4-204ENST00000477446 DUSP12Q9UNI6 340 aa17.38■□□□□ 0.37
EPHB4-204ENST00000477446 SNX10Q9Y5X0 201 aa17.38■□□□□ 0.37
EPHB4-204ENST00000477446 COL4A2P08572 1712 aa17.38■□□□□ 0.37
EPHB4-204ENST00000477446 GFRA2O00451 464 aa17.37■□□□□ 0.37
EPHB4-204ENST00000477446 TSPAN3O60637 253 aa17.37■□□□□ 0.37
EPHB4-204ENST00000477446 NFATC1O95644 943 aa17.37■□□□□ 0.37
EPHB4-204ENST00000477446 CYP17A1P05093 508 aa17.37■□□□□ 0.37
EPHB4-204ENST00000477446 FAM153BP0C7A2 387 aa17.37■□□□□ 0.37
EPHB4-204ENST00000477446 TACR2P21452 398 aa17.37■□□□□ 0.37
EPHB4-204ENST00000477446 ECHS1P30084 290 aa17.37■□□□□ 0.37
EPHB4-204ENST00000477446 SSR1P43307 286 aaKnown RBP17.37■□□□□ 0.37
EPHB4-204ENST00000477446 AIF1P55008 147 aa17.37■□□□□ 0.37
EPHB4-204ENST00000477446 TAS2R40P59535 323 aa17.37■□□□□ 0.37
EPHB4-204ENST00000477446 SLC25A11Q02978 314 aaKnown RBP17.37■□□□□ 0.37
EPHB4-204ENST00000477446 SCAPQ12770 1279 aa17.37■□□□□ 0.37
EPHB4-204ENST00000477446 DHCR24Q15392 516 aa17.37■□□□□ 0.37
EPHB4-204ENST00000477446 FAM153CQ494X1 144 aa17.37■□□□□ 0.37
EPHB4-204ENST00000477446 LY6G5CQ5SRR4 150 aa17.37■□□□□ 0.37
EPHB4-204ENST00000477446 ERMARDQ5T6L9 678 aa17.37■□□□□ 0.37
EPHB4-204ENST00000477446 LRRC38Q5VT99 294 aa17.37■□□□□ 0.37
EPHB4-204ENST00000477446 SYDE1Q6ZW31 735 aaPredicted RBP17.37■□□□□ 0.37
EPHB4-204ENST00000477446 CHSY1Q86X52 802 aa17.37■□□□□ 0.37
EPHB4-204ENST00000477446 TSEN2Q8NCE0 465 aaKnown RBP17.37■□□□□ 0.37
EPHB4-204ENST00000477446 TTC8Q8TAM2 541 aa17.37■□□□□ 0.37
EPHB4-204ENST00000477446 SLCO2A1Q92959 643 aa17.37■□□□□ 0.37
EPHB4-204ENST00000477446 MYEOVQ96EZ4 313 aa17.37■□□□□ 0.37
EPHB4-204ENST00000477446 P2RY11Q96G91 374 aa17.37■□□□□ 0.37
EPHB4-204ENST00000477446 C1orf74Q96LT6 269 aa17.37■□□□□ 0.37
EPHB4-204ENST00000477446 DDX50Q9BQ39 737 aaKnown RBP17.37■□□□□ 0.37
EPHB4-204ENST00000477446 TRPV5Q9NQA5 729 aa17.37■□□□□ 0.37
EPHB4-204ENST00000477446 SLC2A4RGQ9NR83 387 aa17.37■□□□□ 0.37
EPHB4-204ENST00000477446 FAM153AQ9UHL3 310 aa17.37■□□□□ 0.37
EPHB4-204ENST00000477446 DAPK3O43293 454 aa17.36■□□□□ 0.37
EPHB4-204ENST00000477446 COILP38432 576 aaPredicted RBP17.36■□□□□ 0.37
EPHB4-204ENST00000477446 PTGIRP43119 386 aa17.36■□□□□ 0.37
EPHB4-204ENST00000477446 AUHQ13825 339 aaKnown RBP17.36■□□□□ 0.37
EPHB4-204ENST00000477446 ITPRIPL2Q3MIP1 535 aa17.36■□□□□ 0.37
EPHB4-204ENST00000477446 EFHC2Q5JST6 749 aa17.36■□□□□ 0.37
EPHB4-204ENST00000477446 TXNRD3NBQ6F5E7 133 aa17.36■□□□□ 0.37
EPHB4-204ENST00000477446 CCDC137Q6PK04 289 aaKnown RBP17.36■□□□□ 0.37
EPHB4-204ENST00000477446 C14orf80Q86SX3 495 aa17.36■□□□□ 0.37
EPHB4-204ENST00000477446 JAMLQ86YT9 394 aa17.36■□□□□ 0.37
EPHB4-204ENST00000477446 KATNAL2Q8IYT4 538 aa17.36■□□□□ 0.37
EPHB4-204ENST00000477446 LGI2Q8N0V4 545 aa17.36■□□□□ 0.37
EPHB4-204ENST00000477446 CPA6Q8N4T0 437 aa17.36■□□□□ 0.37
EPHB4-204ENST00000477446 DNASE1L2Q92874 299 aa17.36■□□□□ 0.37
EPHB4-204ENST00000477446 SNRNP25Q9BV90 132 aaKnown RBP17.36■□□□□ 0.37
EPHB4-204ENST00000477446 OSBPL2Q9H1P3 480 aa17.36■□□□□ 0.37
EPHB4-204ENST00000477446 ZWILCHQ9H900 591 aa17.36■□□□□ 0.37
EPHB4-204ENST00000477446 GPATCH2LQ9NWQ4 482 aa17.36■□□□□ 0.37
EPHB4-204ENST00000477446 MUTYHQ9UIF7 546 aa17.36■□□□□ 0.37
EPHB4-204ENST00000477446 F5H5T6 163 aa17.36■□□□□ 0.37
EPHB4-204ENST00000477446 SGSHP51688 502 aa17.36■□□□□ 0.37
EPHB4-204ENST00000477446 PFKPQ01813 784 aa17.36■□□□□ 0.37
EPHB4-204ENST00000477446 HADHQ16836 314 aaKnown RBP17.36■□□□□ 0.37
EPHB4-204ENST00000477446 SMTNL2Q2TAL5 461 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms