RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 TMEM65Q6PI78 240 aa6.55□□□□□ -1.36
VPS50-212ENST00000476413 MDGA2Q7Z553 956 aa6.55□□□□□ -1.36
VPS50-212ENST00000476413 ADPRHL1Q8NDY3 354 aa6.55□□□□□ -1.36
VPS50-212ENST00000476413 C2CD4CQ8TF44 421 aa6.55□□□□□ -1.36
VPS50-212ENST00000476413 CENPIQ92674 756 aaPredicted RBP6.55□□□□□ -1.36
VPS50-212ENST00000476413 PRRX2Q99811 253 aa6.55□□□□□ -1.36
VPS50-212ENST00000476413 MROH8Q9H579 483 aa6.55□□□□□ -1.36
VPS50-212ENST00000476413 ZDHHC7Q9NXF8 308 aa6.55□□□□□ -1.36
VPS50-212ENST00000476413 AASSQ9UDR5 926 aa6.55□□□□□ -1.36
VPS50-212ENST00000476413 PACSIN3Q9UKS6 424 aa6.55□□□□□ -1.36
VPS50-212ENST00000476413 PKP3Q9Y446 797 aa6.55□□□□□ -1.36
VPS50-212ENST00000476413 SETD1BQ9UPS6 1966 aaKnown RBP6.55□□□□□ -1.36
VPS50-212ENST00000476413 SPATA31A5Q5VU36 1347 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 SPATA31A6Q5VVP1 1343 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 SPATA31A7Q8IWB4 1347 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 A0A087X0M5 115 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 A0A1B0GX30 115 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 BTBD19C9JJ37 291 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 RRHO14718 337 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 TULP3O75386 442 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 JTBO76095 146 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 SLC3A2P08195 630 aaKnown RBP6.54□□□□□ -1.36
VPS50-212ENST00000476413 NHLRC4P0CG21 123 aaPredicted RBP6.54□□□□□ -1.36
VPS50-212ENST00000476413 ADPRHP54922 357 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 DCAF7P61962 342 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 TDGQ13569 410 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 ALKBH1Q13686 389 aaKnown RBP6.54□□□□□ -1.36
VPS50-212ENST00000476413 KPNB1Q14974 876 aaKnown RBP6.54□□□□□ -1.36
VPS50-212ENST00000476413 NFIL3Q16649 462 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 TSTQ16762 297 aaKnown RBP6.54□□□□□ -1.36
VPS50-212ENST00000476413 FAM153CQ494X1 144 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 GXYLT1Q4G148 440 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 RUNDC3AQ59EK9 446 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 NAA35Q5VZE5 725 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 NAPEPLDQ6IQ20 393 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 ZNF474Q6S9Z5 364 aaPredicted RBP6.54□□□□□ -1.36
VPS50-212ENST00000476413 PCSK4Q6UW60 755 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 LDLRAD3Q86YD5 345 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 TDRD7Q8NHU6 1098 aaKnown RBP6.54□□□□□ -1.36
VPS50-212ENST00000476413 CELF1Q92879 486 aaKnown RBP6.54□□□□□ -1.36
VPS50-212ENST00000476413 C7orf26Q96N11 449 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 UROC1Q96N76 676 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 ZNF347Q96SE7 839 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 USP44Q9H0E7 712 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 LMAN2LQ9H0V9 348 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 TTYH1Q9H313 450 aaPredicted RBP6.54□□□□□ -1.36
VPS50-212ENST00000476413 TXNRD2Q9NNW7 524 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 SEMA4BQ9NPR2 832 aaPredicted RBP6.54□□□□□ -1.36
VPS50-212ENST00000476413 SLC25A10Q9UBX3 287 aaPredicted RBP6.54□□□□□ -1.36
VPS50-212ENST00000476413 MYRFQ9Y2G1 1151 aa6.54□□□□□ -1.36
VPS50-212ENST00000476413 HEMK1Q9Y5R4 338 aaPredicted RBP6.54□□□□□ -1.36
VPS50-212ENST00000476413 A0A1W2PPH5 198 aa6.53□□□□□ -1.36
VPS50-212ENST00000476413 TMEM191CA6NGB0 347 aa6.53□□□□□ -1.36
VPS50-212ENST00000476413 TARM1B6A8C7 271 aa6.53□□□□□ -1.36
VPS50-212ENST00000476413 F5H0A9 414 aaPredicted RBP6.53□□□□□ -1.36
VPS50-212ENST00000476413 DSCR3O14972 297 aa6.53□□□□□ -1.36
VPS50-212ENST00000476413 TMEM63AO94886 807 aa6.53□□□□□ -1.36
VPS50-212ENST00000476413 RTN3O95197 1032 aaPredicted RBP6.53□□□□□ -1.36
VPS50-212ENST00000476413 DDX58O95786 925 aaKnown RBP6.53□□□□□ -1.36
VPS50-212ENST00000476413 PKMP14618 531 aaKnown RBP6.53□□□□□ -1.36
VPS50-212ENST00000476413 MAN1A1P33908 653 aa6.53□□□□□ -1.36
VPS50-212ENST00000476413 HNF1BP35680 557 aa6.53□□□□□ -1.36
VPS50-212ENST00000476413 SOX10P56693 466 aa6.53□□□□□ -1.36
VPS50-212ENST00000476413 RPP30P78346 268 aaKnown RBP6.53□□□□□ -1.36
VPS50-212ENST00000476413 SEC23BQ15437 767 aa6.53□□□□□ -1.36
VPS50-212ENST00000476413 GPR162Q16538 588 aa6.53□□□□□ -1.36
VPS50-212ENST00000476413 VSTM1Q6UX27 236 aa6.53□□□□□ -1.36
VPS50-212ENST00000476413 RNF144BQ7Z419 303 aa6.53□□□□□ -1.36
VPS50-212ENST00000476413 GALNT7Q86SF2 657 aa6.53□□□□□ -1.36
VPS50-212ENST00000476413 AMIGO2Q86SJ2 522 aa6.53□□□□□ -1.36
VPS50-212ENST00000476413 VPS52Q8N1B4 723 aa6.53□□□□□ -1.36
VPS50-212ENST00000476413 FAM110DQ8TAY7 271 aaPredicted RBP6.53□□□□□ -1.36
VPS50-212ENST00000476413 ADAMTS18Q8TE60 1221 aa6.53□□□□□ -1.36
VPS50-212ENST00000476413 RITA1Q96K30 269 aa6.53□□□□□ -1.36
VPS50-212ENST00000476413 CCDC17Q96LX7 622 aa6.53□□□□□ -1.36
VPS50-212ENST00000476413 FYTTD1Q96QD9 318 aaKnown RBP6.53□□□□□ -1.36
VPS50-212ENST00000476413 TRIM31Q9BZY9 425 aa6.53□□□□□ -1.36
VPS50-212ENST00000476413 MLXIPLQ9NP71 852 aa6.53□□□□□ -1.36
VPS50-212ENST00000476413 ASB6Q9NWX5 421 aa6.53□□□□□ -1.36
VPS50-212ENST00000476413 SH3BP4Q9P0V3 963 aa6.53□□□□□ -1.36
VPS50-212ENST00000476413 SLC17A6Q9P2U8 582 aa6.53□□□□□ -1.36
VPS50-212ENST00000476413 CNOT7Q9UIV1 285 aaKnown RBP6.53□□□□□ -1.36
VPS50-212ENST00000476413 NAALADL1Q9UQQ1 740 aa6.53□□□□□ -1.36
VPS50-212ENST00000476413 MCIDASD6RGH6 385 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 USO1O60763 962 aaKnown RBP6.52□□□□□ -1.37
VPS50-212ENST00000476413 GCATO75600 419 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 GCP02774 474 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 ENO1P06733 434 aaKnown RBP6.52□□□□□ -1.37
VPS50-212ENST00000476413 CYP4B1P13584 511 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 TGM2P21980 687 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 PRKCHP24723 683 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 SOX2P48431 317 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 RPS6KA3P51812 740 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 ARHGAP8P85298 464 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 ZBTB16Q05516 673 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 BYSLQ13895 437 aaKnown RBP6.52□□□□□ -1.37
VPS50-212ENST00000476413 CAMK1Q14012 370 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 CCDC30Q5VVM6 783 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 RANBP10Q6VN20 620 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 TMEM200AQ86VY9 491 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms