RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 HAPLN1P10915 354 aaPredicted RBP19.59■□□□□ 0.73
SYF2-204ENST00000476231 ALADP13716 330 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 ERCC2P18074 760 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 MNAT1P51948 309 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 DENND5BQ6ZUT9 1274 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 RNF168Q8IYW5 571 aaPredicted RBP19.59■□□□□ 0.73
SYF2-204ENST00000476231 FITM2Q8N6M3 262 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 TTC9BQ8N6N2 239 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 CASP10Q92851 521 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 IGSF21Q96ID5 467 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 HAPLN3Q96S86 360 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 ECT2Q9H8V3 914 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 RAB6BQ9NRW1 208 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 OR12D3Q9UGF7 316 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 COL4A6Q14031 1691 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 PPP1R12AO14974 1030 aaPredicted RBP19.59■□□□□ 0.73
SYF2-204ENST00000476231 EFCAB14O75071 495 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 CCNB1P14635 433 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 CCR1P32246 355 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 PGFP49763 221 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 PPP2R5DQ14738 602 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 MGAT5BQ3V5L5 792 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 MSANTD2Q6P1R3 559 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 LVRNQ6Q4G3 990 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 SERPINB11Q96P15 392 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 FERMT1Q9BQL6 677 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 MTRRQ9UBK8 725 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 ZNF180Q9UJW8 692 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 CHMP2BQ9UQN3 213 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 BACE2Q9Y5Z0 518 aa19.59■□□□□ 0.73
SYF2-204ENST00000476231 TCRBV9S1A1TA0A576 114 aa19.58■□□□□ 0.73
SYF2-204ENST00000476231 HSPA8P11142 646 aaKnown RBP19.58■□□□□ 0.73
SYF2-204ENST00000476231 YWHAQP27348 245 aa19.58■□□□□ 0.73
SYF2-204ENST00000476231 ALDH3A1P30838 453 aa19.58■□□□□ 0.73
SYF2-204ENST00000476231 USP46P62068 366 aa19.58■□□□□ 0.73
SYF2-204ENST00000476231 RPL10AP62906 217 aaKnown RBP19.58■□□□□ 0.73
SYF2-204ENST00000476231 SLC18A2Q05940 514 aa19.58■□□□□ 0.73
SYF2-204ENST00000476231 PRKD1Q15139 912 aaPredicted RBP19.58■□□□□ 0.73
SYF2-204ENST00000476231 SLC8B1Q6J4K2 584 aa19.58■□□□□ 0.73
SYF2-204ENST00000476231 PRSS55Q6UWB4 352 aaPredicted RBP19.58■□□□□ 0.73
SYF2-204ENST00000476231 TAB3Q8N5C8 712 aaPredicted RBP19.58■□□□□ 0.73
SYF2-204ENST00000476231 FBXO22Q8NEZ5 403 aa19.58■□□□□ 0.73
SYF2-204ENST00000476231 HTR3CQ8WXA8 447 aa19.58■□□□□ 0.73
SYF2-204ENST00000476231 ZNF75CPQ92670 426 aaPredicted RBP19.58■□□□□ 0.73
SYF2-204ENST00000476231 ZNF689Q96CS4 500 aaPredicted RBP19.58■□□□□ 0.73
SYF2-204ENST00000476231 GRID1Q9ULK0 1009 aa19.58■□□□□ 0.73
SYF2-204ENST00000476231 SLC27A5Q9Y2P5 690 aa19.58■□□□□ 0.73
SYF2-204ENST00000476231 CDY1Q9Y6F8 540 aa19.58■□□□□ 0.73
SYF2-204ENST00000476231 IKBKGQ9Y6K9 419 aa19.58■□□□□ 0.73
SYF2-204ENST00000476231 ZNF638Q14966 1978 aaKnown RBP19.58■□□□□ 0.72
SYF2-204ENST00000476231 KIAA0355O15063 1070 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 NCAM2O15394 837 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 DCTN3O75935 186 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 VNN2O95498 520 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 MT-ND3P03897 115 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 NQO1P15559 274 aaKnown RBP19.57■□□□□ 0.72
SYF2-204ENST00000476231 TPSB2P20231 275 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 HTR7P34969 479 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 GLUD2P49448 558 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 PSEN1P49768 467 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 MGAT5Q09328 741 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 DNAJC3Q13217 504 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 SETDB1Q15047 1291 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 TPSAB1Q15661 275 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 ASRGL1Q7L266 308 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 IGDCC3Q8IVU1 814 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 CCDC110Q8TBZ0 833 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 RMDN2Q96LZ7 410 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 SEPT5Q99719 369 aaPredicted RBP19.57■□□□□ 0.72
SYF2-204ENST00000476231 ARHGEF3Q9NR81 526 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 OSER1Q9NX31 292 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 GMIPQ9P107 970 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 SFMBT1Q9UHJ3 866 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 STK10O94804 968 aaKnown RBP19.57■□□□□ 0.72
SYF2-204ENST00000476231 LRIG2O94898 1065 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 EFTUD2Q15029 972 aaKnown RBP eCLIP19.57■□□□□ 0.723e-6■□□□□ 10.7
SYF2-204ENST00000476231 SEPT7Q16181 437 aaKnown RBP19.57■□□□□ 0.72
SYF2-204ENST00000476231 PSMD5Q16401 504 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 NECAB2Q7Z6G3 386 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 CHSY1Q86X52 802 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 STKLD1Q8NE28 680 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 LRRN4Q8WUT4 740 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 FBXO32Q969P5 355 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 CEP295NLQ96MC4 621 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 CRISPLD1Q9H336 500 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 CLIC5Q9NZA1 410 aa19.57■□□□□ 0.72
SYF2-204ENST00000476231 CARNS1A5YM72 827 aa19.56■□□□□ 0.72
SYF2-204ENST00000476231 TRIM43BA6NCK2 446 aa19.56■□□□□ 0.72
SYF2-204ENST00000476231 INHBAP08476 426 aa19.56■□□□□ 0.72
SYF2-204ENST00000476231 DHRS4L1P0CG22 281 aa19.56■□□□□ 0.72
SYF2-204ENST00000476231 VAV1P15498 845 aa19.56■□□□□ 0.72
SYF2-204ENST00000476231 PRKCHP24723 683 aa19.56■□□□□ 0.72
SYF2-204ENST00000476231 SLC8A1P32418 973 aa19.56■□□□□ 0.72
SYF2-204ENST00000476231 SERPINB6P35237 376 aa19.56■□□□□ 0.72
SYF2-204ENST00000476231 MAGEA3P43357 314 aa19.56■□□□□ 0.72
SYF2-204ENST00000476231 SF3A3Q12874 501 aaKnown RBP eCLIP19.56■□□□□ 0.72
SYF2-204ENST00000476231 DUSP4Q13115 394 aa19.56■□□□□ 0.72
SYF2-204ENST00000476231 SPOUT1Q5T280 376 aaKnown RBP19.56■□□□□ 0.72
SYF2-204ENST00000476231 FAM47EQ6ZV65 393 aa19.56■□□□□ 0.72
SYF2-204ENST00000476231 SH2D5Q6ZV89 423 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms