RNA–Protein interactions for RNA: ENST00000475307.1

GPM6B-208, Transcript of glycoprotein M6B, humanhuman

TSL 3

Gene GPM6B, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-208ENST00000475307 ZBTB16Q05516 673 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 DEUP1Q05D60 604 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 SLC12A1Q13621 1099 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 SYCP1Q15431 976 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 HNRNPA1L2Q32P51 320 aaKnown RBP11.83□□□□□ -0.52
GPM6B-208ENST00000475307 PLEKHG6Q3KR16 790 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 TTC31Q49AM3 519 aaPredicted RBP11.83□□□□□ -0.52
GPM6B-208ENST00000475307 DCAF12L1Q5VU92 463 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 ZNF776Q68DI1 518 aaPredicted RBP11.83□□□□□ -0.52
GPM6B-208ENST00000475307 KDM1BQ8NB78 822 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 CADM4Q8NFZ8 388 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 NEK11Q8NG66 645 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 EPS8L1Q8TE68 723 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 SLC20A1Q8WUM9 679 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 IGSF8Q969P0 613 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 MYO19Q96H55 970 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 MRGPRX3Q96LB0 322 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 TKTL2Q9H0I9 626 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 MIR1-1HGQ9H1L0 117 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 PIGVQ9NUD9 493 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 NCKAP1Q9Y2A7 1128 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 DAAM1Q9Y4D1 1078 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 PAXBP1Q9Y5B6 917 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 HS3ST4Q9Y661 456 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 THADAQ6YHU6 1953 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 RALGAPA1Q6GYQ0 2036 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.82□□□□□ -0.52
GPM6B-208ENST00000475307 LGALS16A8MUM7 142 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 METTL12A8MUP2 240 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 TTC34A8MYJ7 566 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 ARHGAP33O14559 1287 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 SIN3BO75182 1162 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 ADCY5O95622 1261 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 F9P00740 461 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 SYPP08247 313 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 ZNF18P17022 549 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 TFE3P19532 575 aaPredicted RBP11.82□□□□□ -0.52
GPM6B-208ENST00000475307 MZF1P28698 734 aaPredicted RBP11.82□□□□□ -0.52
GPM6B-208ENST00000475307 NNMTP40261 264 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 CXCR3P49682 368 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 JAM2P57087 298 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 CENPCQ03188 943 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 TYRO3Q06418 890 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 SULT2A1Q06520 285 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 ZNF177Q13360 481 aaPredicted RBP11.82□□□□□ -0.52
GPM6B-208ENST00000475307 SLC25A52Q3SY17 297 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 BRMS1LQ5PSV4 323 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 N4BP2L1Q5TBK1 243 aaPredicted RBP11.82□□□□□ -0.52
GPM6B-208ENST00000475307 OTUD1Q5VV17 481 aaPredicted RBP11.82□□□□□ -0.52
GPM6B-208ENST00000475307 PSAPL1Q6NUJ1 521 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 HDDC3Q8N4P3 179 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 ZCCHC9Q8N567 271 aaKnown RBP11.82□□□□□ -0.52
GPM6B-208ENST00000475307 GANCQ8TET4 914 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 SNX19Q92543 992 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 RPL10LQ96L21 214 aaKnown RBP11.82□□□□□ -0.52
GPM6B-208ENST00000475307 PPP1R9BQ96SB3 815 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 TBCBQ99426 244 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 NAT10Q9H0A0 1025 aaKnown RBP11.82□□□□□ -0.52
GPM6B-208ENST00000475307 BTBD1Q9H0C5 482 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 RSPH9Q9H1X1 276 aaPredicted RBP11.82□□□□□ -0.52
GPM6B-208ENST00000475307 CAPN10Q9HC96 672 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 SLCO3A1Q9UIG8 710 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 NOCTQ9UK39 431 aaKnown RBP11.82□□□□□ -0.52
GPM6B-208ENST00000475307 SIK3Q9Y2K2 1263 aa11.82□□□□□ -0.52
GPM6B-208ENST00000475307 EDDM13A0A1B0GTR0 161 aa11.81□□□□□ -0.52
GPM6B-208ENST00000475307 A0A1B0GTW7 788 aa11.81□□□□□ -0.52
GPM6B-208ENST00000475307 TARSL2A2RTX5 802 aaKnown RBP11.81□□□□□ -0.52
GPM6B-208ENST00000475307 CLDN11O75508 207 aa11.81□□□□□ -0.52
GPM6B-208ENST00000475307 CYP1A1P04798 512 aaPredicted RBP11.81□□□□□ -0.52
GPM6B-208ENST00000475307 CHRNB2P17787 502 aa11.81□□□□□ -0.52
GPM6B-208ENST00000475307 ACSL1P33121 698 aa11.81□□□□□ -0.52
GPM6B-208ENST00000475307 FLT3P36888 993 aa11.81□□□□□ -0.52
GPM6B-208ENST00000475307 STK19P49842 368 aaPredicted RBP11.81□□□□□ -0.52
GPM6B-208ENST00000475307 IRAK1P51617 712 aa11.81□□□□□ -0.52
GPM6B-208ENST00000475307 PLK1P53350 603 aa11.81□□□□□ -0.52
GPM6B-208ENST00000475307 FMO1Q01740 532 aa11.81□□□□□ -0.52
GPM6B-208ENST00000475307 SFSWAPQ12872 951 aaKnown RBP11.81□□□□□ -0.52
GPM6B-208ENST00000475307 NCAPHQ15003 741 aa11.81□□□□□ -0.52
GPM6B-208ENST00000475307 C9orf64Q5T6V5 341 aa11.81□□□□□ -0.52
GPM6B-208ENST00000475307 SH3PXD2AQ5TCZ1 1133 aa11.81□□□□□ -0.52
GPM6B-208ENST00000475307 CXorf57Q6NSI4 855 aaKnown RBP11.81□□□□□ -0.52
GPM6B-208ENST00000475307 LRSAM1Q6UWE0 723 aa11.81□□□□□ -0.52
GPM6B-208ENST00000475307 LRRC31Q6UY01 552 aa11.81□□□□□ -0.52
GPM6B-208ENST00000475307 TRIM72Q6ZMU5 477 aa11.81□□□□□ -0.52
GPM6B-208ENST00000475307 PHLDB2Q86SQ0 1253 aa11.81□□□□□ -0.52
GPM6B-208ENST00000475307 C14orf80Q86SX3 495 aa11.81□□□□□ -0.52
GPM6B-208ENST00000475307 MINDY1Q8N5J2 469 aa11.81□□□□□ -0.52
GPM6B-208ENST00000475307 AOPEPQ8N6M6 819 aa11.81□□□□□ -0.52
GPM6B-208ENST00000475307 DNASE2BQ8WZ79 361 aa11.81□□□□□ -0.52
GPM6B-208ENST00000475307 NT5C3BQ969T7 300 aa11.81□□□□□ -0.52
GPM6B-208ENST00000475307 PGAP3Q96FM1 320 aaPredicted RBP11.81□□□□□ -0.52
GPM6B-208ENST00000475307 CFAP57Q96MR6 1250 aa11.81□□□□□ -0.52
GPM6B-208ENST00000475307 ADAM33Q9BZ11 813 aa11.81□□□□□ -0.52
GPM6B-208ENST00000475307 PCED1AQ9H1Q7 454 aa11.81□□□□□ -0.52
GPM6B-208ENST00000475307 PABPC3Q9H361 631 aaKnown RBP11.81□□□□□ -0.52
GPM6B-208ENST00000475307 C6orf106Q9H6K1 298 aaPredicted RBP11.81□□□□□ -0.52
GPM6B-208ENST00000475307 ANLNQ9NQW6 1124 aa11.81□□□□□ -0.52
GPM6B-208ENST00000475307 METTL5Q9NRN9 209 aaKnown RBP11.81□□□□□ -0.52
GPM6B-208ENST00000475307 TMEM51Q9NW97 253 aa11.81□□□□□ -0.52
GPM6B-208ENST00000475307 ARHGEF38Q9NXL2 777 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms