RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 ABCG1P45844 678 aa12.78□□□□□ -0.36
RNF220-211ENST00000474956 HEATR6Q6AI08 1181 aaKnown RBP12.78□□□□□ -0.36
RNF220-211ENST00000474956 CASC4Q6P4E1 433 aa12.78□□□□□ -0.36
RNF220-211ENST00000474956 TRIM42Q8IWZ5 723 aa12.78□□□□□ -0.36
RNF220-211ENST00000474956 SIX6OS1Q8N1H7 587 aa12.78□□□□□ -0.36
RNF220-211ENST00000474956 P2RY11Q96G91 374 aa12.78□□□□□ -0.36
RNF220-211ENST00000474956 QKIQ96PU8 341 aaKnown RBP eCLIP12.78□□□□□ -0.36
RNF220-211ENST00000474956 KLC2Q9H0B6 622 aa12.78□□□□□ -0.36
RNF220-211ENST00000474956 PRDM12Q9H4Q4 367 aa12.78□□□□□ -0.36
RNF220-211ENST00000474956 PIDD1Q9HB75 910 aa12.78□□□□□ -0.36
RNF220-211ENST00000474956 KCNK4Q9NYG8 393 aa12.78□□□□□ -0.36
RNF220-211ENST00000474956 GTF2IRD1Q9UHL9 959 aa12.78□□□□□ -0.36
RNF220-211ENST00000474956 PSAT1Q9Y617 370 aa12.78□□□□□ -0.36
RNF220-211ENST00000474956 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.78□□□□□ -0.36
RNF220-211ENST00000474956 B2RBV5 119 aa12.78□□□□□ -0.36
RNF220-211ENST00000474956 RNF103O00237 685 aa12.78□□□□□ -0.36
RNF220-211ENST00000474956 ELNP15502 786 aa12.78□□□□□ -0.36
RNF220-211ENST00000474956 THPOP40225 353 aa12.78□□□□□ -0.36
RNF220-211ENST00000474956 INHBEP58166 350 aa12.78□□□□□ -0.36
RNF220-211ENST00000474956 FAM35AQ86V20 835 aa12.78□□□□□ -0.36
RNF220-211ENST00000474956 SCAMP5Q8TAC9 235 aa12.78□□□□□ -0.36
RNF220-211ENST00000474956 HTR3CQ8WXA8 447 aa12.78□□□□□ -0.36
RNF220-211ENST00000474956 TNIP3Q96KP6 325 aa12.78□□□□□ -0.36
RNF220-211ENST00000474956 FAM161BQ96MY7 647 aa12.78□□□□□ -0.36
RNF220-211ENST00000474956 OLFM3Q96PB7 478 aa12.78□□□□□ -0.36
RNF220-211ENST00000474956 NPY6RQ99463 290 aa12.78□□□□□ -0.36
RNF220-211ENST00000474956 APOL2Q9BQE5 337 aa12.78□□□□□ -0.36
RNF220-211ENST00000474956 TRMT13Q9NUP7 481 aaKnown RBP12.78□□□□□ -0.36
RNF220-211ENST00000474956 PDP2Q9P2J9 529 aa12.78□□□□□ -0.36
RNF220-211ENST00000474956 FAM237BA0A1B0GVD1 139 aa12.77□□□□□ -0.36
RNF220-211ENST00000474956 IGHA2P01877 340 aa12.77□□□□□ -0.36
RNF220-211ENST00000474956 NCAM1P13591 858 aa12.77□□□□□ -0.36
RNF220-211ENST00000474956 CCND3P30281 292 aaPredicted RBP12.77□□□□□ -0.36
RNF220-211ENST00000474956 DEUP1Q05D60 604 aa12.77□□□□□ -0.36
RNF220-211ENST00000474956 C6orf163Q5TEZ5 329 aa12.77□□□□□ -0.36
RNF220-211ENST00000474956 COLGALT1Q8NBJ5 622 aa12.77□□□□□ -0.36
RNF220-211ENST00000474956 HSFY1Q96LI6 401 aa12.77□□□□□ -0.36
RNF220-211ENST00000474956 NR1H4Q96RI1 486 aaPredicted RBP12.77□□□□□ -0.36
RNF220-211ENST00000474956 LBHD1Q9BQE6 289 aaPredicted RBP12.77□□□□□ -0.36
RNF220-211ENST00000474956 ARMCX1Q9P291 453 aa12.77□□□□□ -0.36
RNF220-211ENST00000474956 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.77□□□□□ -0.37
RNF220-211ENST00000474956 ANKRD33BA6NCL7 494 aa12.77□□□□□ -0.37
RNF220-211ENST00000474956 UNCXA6NJT0 531 aa12.77□□□□□ -0.37
RNF220-211ENST00000474956 COPEO14579 308 aa12.77□□□□□ -0.37
RNF220-211ENST00000474956 DGKIO75912 1065 aa12.77□□□□□ -0.37
RNF220-211ENST00000474956 OR4Q2P0C623 313 aa12.77□□□□□ -0.37
RNF220-211ENST00000474956 FAM200BP0CF97 657 aa12.77□□□□□ -0.37
RNF220-211ENST00000474956 AKR1A1P14550 325 aa12.77□□□□□ -0.37
RNF220-211ENST00000474956 BDNFP23560 247 aa12.77□□□□□ -0.37
RNF220-211ENST00000474956 LRPAP1P30533 357 aa12.77□□□□□ -0.37
RNF220-211ENST00000474956 PNPLA4P41247 253 aa12.77□□□□□ -0.37
RNF220-211ENST00000474956 BIRC2Q13490 618 aa12.77□□□□□ -0.37
RNF220-211ENST00000474956 BHLHA9Q7RTU4 235 aa12.77□□□□□ -0.37
RNF220-211ENST00000474956 NET1Q7Z628 596 aaPredicted RBP12.77□□□□□ -0.37
RNF220-211ENST00000474956 LRRTM3Q86VH5 581 aa12.77□□□□□ -0.37
RNF220-211ENST00000474956 ZDHHC17Q8IUH5 632 aa12.77□□□□□ -0.37
RNF220-211ENST00000474956 SMC1BQ8NDV3 1235 aa12.77□□□□□ -0.37
RNF220-211ENST00000474956 GORASP1Q9BQQ3 440 aa12.77□□□□□ -0.37
RNF220-211ENST00000474956 SENP6Q9GZR1 1112 aaPredicted RBP12.77□□□□□ -0.37
RNF220-211ENST00000474956 WDR6Q9NNW5 1121 aaKnown RBP12.77□□□□□ -0.37
RNF220-211ENST00000474956 UBP1Q9NZI7 540 aa12.77□□□□□ -0.37
RNF220-211ENST00000474956 THP07101 528 aa12.77□□□□□ -0.37
RNF220-211ENST00000474956 MGAT1P26572 445 aa12.77□□□□□ -0.37
RNF220-211ENST00000474956 RAB27AP51159 221 aa12.77□□□□□ -0.37
RNF220-211ENST00000474956 WASHC5Q12768 1159 aa12.77□□□□□ -0.37
RNF220-211ENST00000474956 TRMT5Q32P41 509 aaKnown RBP12.77□□□□□ -0.37
RNF220-211ENST00000474956 TOP6BLQ8N6T0 577 aa12.77□□□□□ -0.37
RNF220-211ENST00000474956 TFB1MQ8WVM0 346 aaKnown RBP12.77□□□□□ -0.37
RNF220-211ENST00000474956 CELF6Q96J87 481 aaKnown RBP12.77□□□□□ -0.37
RNF220-211ENST00000474956 C7orf26Q96N11 449 aa12.77□□□□□ -0.37
RNF220-211ENST00000474956 FAM192AQ9GZU8 254 aa12.77□□□□□ -0.37
RNF220-211ENST00000474956 CAPN14A8MX76 684 aa12.76□□□□□ -0.37
RNF220-211ENST00000474956 H3BRJ5 948 aa12.76□□□□□ -0.37
RNF220-211ENST00000474956 CIB2O75838 187 aa12.76□□□□□ -0.37
RNF220-211ENST00000474956 B3GAT3O94766 335 aa12.76□□□□□ -0.37
RNF220-211ENST00000474956 ARL4AP40617 200 aa12.76□□□□□ -0.37
RNF220-211ENST00000474956 FLT3LGP49771 235 aa12.76□□□□□ -0.37
RNF220-211ENST00000474956 EFHC1Q5JVL4 640 aa12.76□□□□□ -0.37
RNF220-211ENST00000474956 TTC39BQ5VTQ0 682 aaPredicted RBP12.76□□□□□ -0.37
RNF220-211ENST00000474956 ATG16L1Q676U5 607 aa12.76□□□□□ -0.37
RNF220-211ENST00000474956 ALYREFQ86V81 257 aaKnown RBP12.76□□□□□ -0.37
RNF220-211ENST00000474956 SLC26A11Q86WA9 606 aa12.76□□□□□ -0.37
RNF220-211ENST00000474956 CDKL3Q8IVW4 592 aaPredicted RBP12.76□□□□□ -0.37
RNF220-211ENST00000474956 SCUBE1Q8IWY4 988 aa12.76□□□□□ -0.37
RNF220-211ENST00000474956 HACE1Q8IYU2 909 aa12.76□□□□□ -0.37
RNF220-211ENST00000474956 ZNF567Q8N184 647 aa12.76□□□□□ -0.37
RNF220-211ENST00000474956 ATXN7L3BQ96GX2 97 aa12.76□□□□□ -0.37
RNF220-211ENST00000474956 SRPK1Q96SB4 655 aaKnown RBP12.76□□□□□ -0.37
RNF220-211ENST00000474956 PCMTD2Q9NV79 361 aa12.76□□□□□ -0.37
RNF220-211ENST00000474956 DDIT4Q9NX09 232 aa12.76□□□□□ -0.37
RNF220-211ENST00000474956 DNAJB4Q9UDY4 337 aa12.76□□□□□ -0.37
RNF220-211ENST00000474956 PADI3Q9ULW8 664 aa12.76□□□□□ -0.37
RNF220-211ENST00000474956 WASF2Q9Y6W5 498 aa12.76□□□□□ -0.37
RNF220-211ENST00000474956 GCATO75600 419 aa12.76□□□□□ -0.37
RNF220-211ENST00000474956 MAGEA3P43357 314 aa12.76□□□□□ -0.37
RNF220-211ENST00000474956 CPA2P48052 419 aa12.76□□□□□ -0.37
RNF220-211ENST00000474956 CDC42EP1Q00587 391 aa12.76□□□□□ -0.37
RNF220-211ENST00000474956 PRKCZQ05513 592 aa12.76□□□□□ -0.37
RNF220-211ENST00000474956 ZCCHC23Q6ZST2 131 aa12.76□□□□□ -0.37
RNF220-211ENST00000474956 STRADAQ7RTN6 431 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms