RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 CALM1P0DP23 149 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 CALM2P0DP24 149 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 CALM3P0DP25 149 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 SMPD1P17405 629 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 BMP6P22004 513 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 TKTP29401 623 aaKnown RBP6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 GP5P40197 560 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 CCR10P46092 362 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 CAMLGP49069 296 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 GDF10P55107 478 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 WDR4P57081 412 aaKnown RBP6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 LGALS3BPQ08380 585 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 ELP6Q0PNE2 266 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 DLGAP5Q15398 846 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 ACAD10Q6JQN1 1059 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 CASC4Q6P4E1 433 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 CYB5D1Q6P9G0 228 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 PET117Q6UWS5 81 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 TAS2R42Q7RTR8 314 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 SLC43A2Q8N370 569 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 SRBD1Q8N5C6 995 aaKnown RBP6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 IGSF22Q8N9C0 903 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 FANCBQ8NB91 859 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 GFM2Q969S9 779 aaKnown RBP6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 ZNF566Q969W8 418 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 ZNF653Q96CK0 615 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 BTBD2Q9BX70 525 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 NUF2Q9BZD4 464 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 MRPL37Q9BZE1 423 aaKnown RBP6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 FAM107BQ9H098 131 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 ZNF358Q9NW07 568 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 TAS2R7Q9NYW3 318 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 CRNNQ9UBG3 495 aaPredicted RBP6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 SERTAD1Q9UHV2 236 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 CNOT7Q9UIV1 285 aaKnown RBP6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 NUDCQ9Y266 331 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 INVSQ9Y283 1065 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 TLR6Q9Y2C9 796 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 ZBTB1Q9Y2K1 713 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 PTPN13Q12923 2485 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 TRBV23-1A0A0A0MS06 115 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 GOLGA8QA0A0J9YX86 632 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 GOLGA8OA6NCC3 632 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 GOLGA8NF8WBI6 632 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 PDE2AO00408 941 aaPredicted RBP6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 ACKR2O00590 384 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 SH2B2O14492 632 aaPredicted RBP6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 PRODHO43272 600 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 CBR3O75828 277 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 CCNDBP1O95273 360 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 SCGB1D1O95968 90 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 OTCP00480 354 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 NAGAP17050 411 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 PLCG1P19174 1290 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 CHRM3P20309 590 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 ALDH3A1P30838 453 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 BUD31P41223 144 aaPredicted RBP6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 ZNF81P51508 661 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 CCR9P51686 369 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 ATXN3P54252 364 aaPredicted RBP6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 RAB14P61106 215 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 VAMP2P63027 116 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 EEF1A1P68104 462 aaKnown RBP6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 LIPEQ05469 1076 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 EEF1A2Q05639 463 aaKnown RBP6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 PPARAQ07869 468 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 E2F2Q14209 437 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 CYP2A13Q16696 494 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 NDUFA5Q16718 116 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 TCP11X2Q5H9J9 407 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 RTP2Q5QGT7 225 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 FAM26FQ5R3K3 315 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 NBPF12Q5TAG4 269 aaPredicted RBP6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 EEF1A1P5Q5VTE0 462 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 METTL2BQ6P1Q9 378 aaKnown RBP6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 DEGS2Q6QHC5 323 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 TRIM72Q6ZMU5 477 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 DENND5BQ6ZUT9 1274 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 TMTC3Q6ZXV5 915 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 RHPN2Q8IUC4 686 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 GRAMD1CQ8IYS0 662 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 SYCP3Q8IZU3 236 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 ANKFN1Q8N957 763 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 POC1BQ8TC44 478 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 ASZ1Q8WWH4 475 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 ST8SIA4Q92187 359 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 TTC9Q92623 222 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 GATA6Q92908 595 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 RILPL2Q969X0 211 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 VPS33AQ96AX1 596 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 PTERQ96BW5 349 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 MED30Q96HR3 178 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 PIWIL1Q96J94 861 aaKnown RBP6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 PDLIM2Q96JY6 352 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 CINPQ9BW66 212 aaPredicted RBP6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 STRA6Q9BX79 667 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 ZNF341Q9BYN7 854 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 BCO2Q9BYV7 579 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 ZNF518BQ9C0D4 1074 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 ABCG8Q9H221 673 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms