RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 KIR2DL1P43626 348 aaPredicted RBP12.78□□□□□ -0.36
DDX56-209ENST00000473924 KRT83P78385 493 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 NRG1Q02297 640 aaPredicted RBP12.78□□□□□ -0.36
DDX56-209ENST00000473924 SLC12A1Q13621 1099 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 MESDQ14696 234 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 ANGPT1Q15389 498 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 HADHQ16836 314 aaKnown RBP12.78□□□□□ -0.36
DDX56-209ENST00000473924 HSF5Q4G112 596 aaPredicted RBP12.78□□□□□ -0.36
DDX56-209ENST00000473924 ALFQ53S48 1182 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 EOGTQ5NDL2 527 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 FAM72AQ5TYM5 149 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 EGFLAMQ63HQ2 1017 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 MBLAC2Q68D91 279 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 FAM72DQ6L9T8 149 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 PKN3Q6P5Z2 889 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 FAM72BQ86X60 149 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 TMEM139Q8IV31 216 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 ZNF683Q8IZ20 524 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.78□□□□□ -0.36
DDX56-209ENST00000473924 IL17RCQ8NAC3 791 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 TXNDC5Q8NBS9 432 aaKnown RBP12.78□□□□□ -0.36
DDX56-209ENST00000473924 TBC1D31Q96DN5 1066 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 PEBP4Q96S96 227 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 SNRNP25Q9BV90 132 aaKnown RBP12.78□□□□□ -0.36
DDX56-209ENST00000473924 MAGEB5Q9BZ81 275 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 ZWILCHQ9H900 591 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 GPATCH2LQ9NWQ4 482 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 PPARGC1AQ9UBK2 798 aaKnown RBP12.78□□□□□ -0.36
DDX56-209ENST00000473924 PLA2G4CQ9UP65 541 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 SLC8A2Q9UPR5 921 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 ATG2BQ96BY7 2078 aa12.77□□□□□ -0.36
DDX56-209ENST00000473924 DAPK3O43293 454 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 PROSCO94903 275 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 RHOCP08134 193 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 EPHB2P29323 1055 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 NTSR1P30989 418 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 CSKP41240 450 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 ARHGAP25P42331 645 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 WASP42768 502 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 TPI1P60174 286 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 SATB1Q01826 763 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 CSTF1Q05048 431 aaKnown RBP12.77□□□□□ -0.37
DDX56-209ENST00000473924 DMC1Q14565 340 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 SMTNL2Q2TAL5 461 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 FUT11Q495W5 492 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 BOLA3Q53S33 107 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 PPP6R3Q5H9R7 873 aaPredicted RBP12.77□□□□□ -0.37
DDX56-209ENST00000473924 PITRM1Q5JRX3 1037 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 C6orf118Q5T5N4 469 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 MANEALQ5VSG8 457 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 TMEM215Q68D42 235 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 MAMSTRQ6ZN01 415 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 SYT13Q7L8C5 426 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 KIAA0907Q7Z7F0 614 aaPredicted RBP12.77□□□□□ -0.37
DDX56-209ENST00000473924 KIAA1328Q86T90 577 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 SETD3Q86TU7 594 aaPredicted RBP12.77□□□□□ -0.37
DDX56-209ENST00000473924 ADIPOR2Q86V24 386 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 PSTKQ8IV42 348 aaKnown RBP12.77□□□□□ -0.37
DDX56-209ENST00000473924 TXLNBQ8N3L3 684 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 ACRBPQ8NEB7 543 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 CCDC112Q8NEF3 446 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 SORCS1Q8WY21 1168 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 HSPH1Q92598 858 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 MUC3BQ9H195 1237 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 MMP17Q9ULZ9 603 aa12.77□□□□□ -0.37
DDX56-209ENST00000473924 SGK1O00141 431 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 EEF2KO00418 725 aaKnown RBP12.76□□□□□ -0.37
DDX56-209ENST00000473924 NPC1O15118 1278 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 MTA2O94776 668 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 ASLP04424 464 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 HNRNPLP14866 589 aaKnown RBP eCLIP12.76□□□□□ -0.37
DDX56-209ENST00000473924 RHOQP17081 205 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 IL1R2P27930 398 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 MZF1P28698 734 aaPredicted RBP12.76□□□□□ -0.37
DDX56-209ENST00000473924 GJC1P36383 396 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 NUMBP49757 651 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 NAP1L1P55209 391 aaKnown RBP12.76□□□□□ -0.37
DDX56-209ENST00000473924 ST8SIA6P61647 398 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 ZNF234Q14588 700 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 GSE1Q14687 1217 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 CA9Q16790 459 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 PLEKHG6Q3KR16 790 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 FNDC3BQ53EP0 1204 aaKnown RBP12.76□□□□□ -0.37
DDX56-209ENST00000473924 KCNT1Q5JUK3 1230 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 ZFYVE27Q5T4F4 411 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 RNF219Q5W0B1 726 aaPredicted RBP12.76□□□□□ -0.37
DDX56-209ENST00000473924 CXorf57Q6NSI4 855 aaKnown RBP12.76□□□□□ -0.37
DDX56-209ENST00000473924 TSSK4Q6SA08 328 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 APCDD1Q8J025 514 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 CYB5D2Q8WUJ1 264 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 LMLNQ96KR4 655 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 ACOX2Q99424 681 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 KCNH6Q9H252 994 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 RETREG1Q9H6L5 497 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 CATSPERBQ9H7T0 1116 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 CACNA2D2Q9NY47 1150 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 VPS28Q9UK41 221 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 FBXO4Q9UKT5 387 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 TFR2Q9UP52 801 aa12.76□□□□□ -0.37
DDX56-209ENST00000473924 TBC1D30Q9Y2I9 924 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms