RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 SFSWAPQ12872 951 aaKnown RBP13.95□□□□□ -0.18
HMGN1-211ENST00000471260 DRAP1Q14919 205 aaPredicted RBP13.95□□□□□ -0.18
HMGN1-211ENST00000471260 UAP1L1Q3KQV9 507 aa13.95□□□□□ -0.18
HMGN1-211ENST00000471260 SH3PXD2AQ5TCZ1 1133 aa13.95□□□□□ -0.18
HMGN1-211ENST00000471260 KLHDC7AQ5VTJ3 777 aa13.95□□□□□ -0.18
HMGN1-211ENST00000471260 RAP1GAP2Q684P5 730 aa13.95□□□□□ -0.18
HMGN1-211ENST00000471260 OR6B2Q6IFH4 312 aa13.95□□□□□ -0.18
HMGN1-211ENST00000471260 CHSY1Q86X52 802 aa13.95□□□□□ -0.18
HMGN1-211ENST00000471260 PASD1Q8IV76 773 aa13.95□□□□□ -0.18
HMGN1-211ENST00000471260 DRC7Q8IY82 874 aa13.95□□□□□ -0.18
HMGN1-211ENST00000471260 LGI2Q8N0V4 545 aa13.95□□□□□ -0.18
HMGN1-211ENST00000471260 TMEM35BQ8NCS4 154 aa13.95□□□□□ -0.18
HMGN1-211ENST00000471260 UBE2Q2Q8WVN8 375 aa13.95□□□□□ -0.18
HMGN1-211ENST00000471260 PRMT1Q99873 361 aaKnown RBP13.95□□□□□ -0.18
HMGN1-211ENST00000471260 GPR174Q9BXC1 333 aa13.95□□□□□ -0.18
HMGN1-211ENST00000471260 STK33Q9BYT3 514 aa13.95□□□□□ -0.18
HMGN1-211ENST00000471260 FAM204AQ9H8W3 233 aa13.95□□□□□ -0.18
HMGN1-211ENST00000471260 SAMSN1Q9NSI8 373 aaKnown RBP13.95□□□□□ -0.18
HMGN1-211ENST00000471260 DNAAF2Q9NVR5 837 aaKnown RBP13.95□□□□□ -0.18
HMGN1-211ENST00000471260 AJAP1Q9UKB5 411 aaPredicted RBP13.95□□□□□ -0.18
HMGN1-211ENST00000471260 ANGPTL2Q9UKU9 493 aa13.95□□□□□ -0.18
HMGN1-211ENST00000471260 INTS6Q9UL03 887 aaKnown RBP13.95□□□□□ -0.18
HMGN1-211ENST00000471260 PYCARDQ9ULZ3 195 aa13.95□□□□□ -0.18
HMGN1-211ENST00000471260 ASCC3Q8N3C0 2202 aaKnown RBP13.94□□□□□ -0.18
HMGN1-211ENST00000471260 A0A1B0GVM2 712 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 TARSL2A2RTX5 802 aaKnown RBP13.94□□□□□ -0.18
HMGN1-211ENST00000471260 TCAF2A6NFQ2 919 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 PES1O00541 588 aaKnown RBP13.94□□□□□ -0.18
HMGN1-211ENST00000471260 NRDCO43847 1150 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 OPHN1O60890 802 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 RNASEH1O60930 286 aaKnown RBP13.94□□□□□ -0.18
HMGN1-211ENST00000471260 DAB1O75553 588 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 TUBB4AP04350 444 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 ERBB2P04626 1255 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 UCHL3P15374 230 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 CYP11B1P15538 503 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 MATKP42679 507 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 MAPK8P45983 427 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 GABRB2P47870 512 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 PLK1P53350 603 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 RPS14P62263 151 aaKnown RBP13.94□□□□□ -0.18
HMGN1-211ENST00000471260 SULT2A1Q06520 285 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 SEMA3BQ13214 749 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 SLC14A1Q13336 389 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 RAPGEF1Q13905 1077 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 HNRNPDQ14103 355 aaKnown RBP13.94□□□□□ -0.18
HMGN1-211ENST00000471260 TAF5Q15542 800 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 HNRNPA1L2Q32P51 320 aaKnown RBP13.94□□□□□ -0.18
HMGN1-211ENST00000471260 PLEKHG6Q3KR16 790 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 TTC31Q49AM3 519 aaPredicted RBP13.94□□□□□ -0.18
HMGN1-211ENST00000471260 PTPN20Q4JDL3 420 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 FSCBQ5H9T9 825 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 RABGAP1LQ5R372 815 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 ACBD5Q5T8D3 534 aaPredicted RBP13.94□□□□□ -0.18
HMGN1-211ENST00000471260 DCAF12L1Q5VU92 463 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 ZNF776Q68DI1 518 aaPredicted RBP13.94□□□□□ -0.18
HMGN1-211ENST00000471260 FAM183BPQ6ZVS7 135 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 USP30Q70CQ3 517 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 CFAP52Q8N1V2 620 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 RNF34Q969K3 372 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 MYEOVQ96EZ4 313 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 MYO19Q96H55 970 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 NAA15Q9BXJ9 866 aaKnown RBP13.94□□□□□ -0.18
HMGN1-211ENST00000471260 BTBD1Q9H0C5 482 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 RSPH9Q9H1X1 276 aaPredicted RBP13.94□□□□□ -0.18
HMGN1-211ENST00000471260 SGK2Q9HBY8 427 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 PLCB1Q9NQ66 1216 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 XPO7Q9UIA9 1087 aaKnown RBP13.94□□□□□ -0.18
HMGN1-211ENST00000471260 DAAM1Q9Y4D1 1078 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 LAMA1P25391 3075 aa13.94□□□□□ -0.18
HMGN1-211ENST00000471260 MUC22E2RYF6 1773 aaPredicted RBP13.94□□□□□ -0.18
HMGN1-211ENST00000471260 CACNA1EQ15878 2313 aa13.93□□□□□ -0.18
HMGN1-211ENST00000471260 ITIH6Q6UXX5 1313 aa13.93□□□□□ -0.18
HMGN1-211ENST00000471260 TPRP12270 2363 aaKnown RBP13.93□□□□□ -0.18
HMGN1-211ENST00000471260 LSM8O95777 96 aaKnown RBP13.93□□□□□ -0.18
HMGN1-211ENST00000471260 F9P00740 461 aa13.93□□□□□ -0.18
HMGN1-211ENST00000471260 NNMTP40261 264 aa13.93□□□□□ -0.18
HMGN1-211ENST00000471260 VASPP50552 380 aaPredicted RBP13.93□□□□□ -0.18
HMGN1-211ENST00000471260 PITX1P78337 314 aaPredicted RBP13.93□□□□□ -0.18
HMGN1-211ENST00000471260 ECT2LQ008S8 904 aa13.93□□□□□ -0.18
HMGN1-211ENST00000471260 HSP90AA4PQ58FG1 418 aa13.93□□□□□ -0.18
HMGN1-211ENST00000471260 PITRM1Q5JRX3 1037 aa13.93□□□□□ -0.18
HMGN1-211ENST00000471260 BRMS1LQ5PSV4 323 aa13.93□□□□□ -0.18
HMGN1-211ENST00000471260 IL27RAQ6UWB1 636 aa13.93□□□□□ -0.18
HMGN1-211ENST00000471260 PIP4P1Q86T03 277 aa13.93□□□□□ -0.18
HMGN1-211ENST00000471260 ZNF677Q86XU0 584 aa13.93□□□□□ -0.18
HMGN1-211ENST00000471260 DHX40Q8IX18 779 aaKnown RBP13.93□□□□□ -0.18
HMGN1-211ENST00000471260 MINDY1Q8N5J2 469 aa13.93□□□□□ -0.18
HMGN1-211ENST00000471260 ZNF366Q8N895 744 aa13.93□□□□□ -0.18
HMGN1-211ENST00000471260 SPC24Q8NBT2 197 aa13.93□□□□□ -0.18
HMGN1-211ENST00000471260 MSANTD4Q8NCY6 345 aa13.93□□□□□ -0.18
HMGN1-211ENST00000471260 C18orf8Q96DM3 657 aa13.93□□□□□ -0.18
HMGN1-211ENST00000471260 PGAP3Q96FM1 320 aaPredicted RBP13.93□□□□□ -0.18
HMGN1-211ENST00000471260 MRGPRX3Q96LB0 322 aa13.93□□□□□ -0.18
HMGN1-211ENST00000471260 CNTNAP3BQ96NU0 1288 aa13.93□□□□□ -0.18
HMGN1-211ENST00000471260 GTPBP2Q9BX10 602 aaKnown RBP13.93□□□□□ -0.18
HMGN1-211ENST00000471260 CNTNAP3Q9BZ76 1288 aa13.93□□□□□ -0.18
HMGN1-211ENST00000471260 OSGEPQ9NPF4 335 aa13.93□□□□□ -0.18
HMGN1-211ENST00000471260 STAP1Q9ULZ2 295 aa13.93□□□□□ -0.18
HMGN1-211ENST00000471260 ERVW-1Q9UQF0 538 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms