RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 SPTLC2O15270 562 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 CCNT1O60563 726 aaKnown RBP4.45□□□□□ -1.7
PRPF3-204ENST00000470824 CNTN5O94779 1100 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 LYL1P12980 280 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 CYP4B1P13584 511 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 PKMP14618 531 aaKnown RBP4.45□□□□□ -1.7
PRPF3-204ENST00000470824 ARSAP15289 507 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 HOXB9P17482 250 aaPredicted RBP4.45□□□□□ -1.7
PRPF3-204ENST00000470824 ABCD3P28288 659 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 ZNF84P51523 738 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 OAZ1P54368 228 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 ARHGAP8P85298 464 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 ABHD18Q0P651 414 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 PUM1Q14671 1186 aaKnown RBP eCLIP4.45□□□□□ -1.7
PRPF3-204ENST00000470824 CC2D1BQ5T0F9 858 aaKnown RBP4.45□□□□□ -1.7
PRPF3-204ENST00000470824 CCDC30Q5VVM6 783 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 ADGRG6Q86SQ4 1221 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 SCN4BQ8IWT1 228 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 C16orf71Q8IYS4 520 aaPredicted RBP4.45□□□□□ -1.7
PRPF3-204ENST00000470824 ADGRF3Q8IZF5 1079 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 GALNT4Q8N4A0 578 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 ZNF366Q8N895 744 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 TDRD7Q8NHU6 1098 aaKnown RBP4.45□□□□□ -1.7
PRPF3-204ENST00000470824 CAGE1Q8TC20 777 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 LARP4BQ92615 738 aaKnown RBP4.45□□□□□ -1.7
PRPF3-204ENST00000470824 CELF1Q92879 486 aaKnown RBP4.45□□□□□ -1.7
PRPF3-204ENST00000470824 TIMP4Q99727 224 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 PRRX2Q99811 253 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 NUAK2Q9H093 628 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 INTS2Q9H0H0 1204 aaKnown RBP4.45□□□□□ -1.7
PRPF3-204ENST00000470824 OSBPL5Q9H0X9 879 aaPredicted RBP4.45□□□□□ -1.7
PRPF3-204ENST00000470824 PDCL3Q9H2J4 239 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 MROH8Q9H579 483 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 ALG13Q9NP73 1137 aaKnown RBP4.45□□□□□ -1.7
PRPF3-204ENST00000470824 TLR8Q9NR97 1041 aaKnown RBP4.45□□□□□ -1.7
PRPF3-204ENST00000470824 TBC1D22BQ9NU19 505 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 PPP1R14DQ9NXH3 145 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 SH3BP4Q9P0V3 963 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 PACSIN3Q9UKS6 424 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 MAFFQ9ULX9 164 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 SPATA31A5Q5VU36 1347 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 SPATA31A6Q5VVP1 1343 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 SPATA31A7Q8IWB4 1347 aa4.45□□□□□ -1.7
PRPF3-204ENST00000470824 GOLGA6L10A0A0M3HER8 536 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 FAM90A7PA6NKC0 464 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 FAM90A22PA8MWA6 464 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 FAM90A12PA8MX19 464 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 FAM90A23PA8MXZ1 464 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 TNPO2O14787 897 aaKnown RBP4.44□□□□□ -1.7
PRPF3-204ENST00000470824 DSCR3O14972 297 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 SYN3O14994 580 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 TMEM63AO94886 807 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 GCP02774 474 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 TGM2P21980 687 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 GSTM2P28161 218 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 AVPR2P30518 371 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 CCT4P50991 539 aaKnown RBP4.44□□□□□ -1.7
PRPF3-204ENST00000470824 MVDP53602 400 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 CACNA2D1P54289 1103 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 ADPRHP54922 357 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 CDH15P55291 814 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 B4GALNT1Q00973 533 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 DMWDQ09019 674 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 NAA25Q14CX7 972 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 SEC23BQ15437 767 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 GXYLT1Q4G148 440 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 AKNAD1Q5T1N1 836 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 FAM69AQ5T7M9 428 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 MTFR2Q6P444 385 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 SLC22A25Q6T423 547 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 RANBP10Q6VN20 620 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 ZNF627Q7L945 461 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 R3HCC1LQ7Z5L2 792 aaKnown RBP4.44□□□□□ -1.7
PRPF3-204ENST00000470824 TMEM200AQ86VY9 491 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 VPS52Q8N1B4 723 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 RFWD2Q8NHY2 731 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 NEU4Q8WWR8 484 aaPredicted RBP4.44□□□□□ -1.7
PRPF3-204ENST00000470824 NCSTNQ92542 709 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 CENPIQ92674 756 aaPredicted RBP4.44□□□□□ -1.7
PRPF3-204ENST00000470824 ATP2A3Q93084 1043 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 ZNF764Q96H86 408 aaPredicted RBP4.44□□□□□ -1.7
PRPF3-204ENST00000470824 DUSP26Q9BV47 211 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 HDHD5Q9BXW7 423 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 CTDSP1Q9GZU7 261 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 PRDM13Q9H4Q3 707 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 VEZTQ9HBM0 779 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 CPNE5Q9HCH3 593 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 BLOC1S4Q9NUP1 217 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 ARL8BQ9NVJ2 186 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 BEX4Q9NWD9 120 aaPredicted RBP4.44□□□□□ -1.7
PRPF3-204ENST00000470824 ORC3Q9UBD5 711 aaPredicted RBP4.44□□□□□ -1.7
PRPF3-204ENST00000470824 CNPY2Q9Y2B0 182 aa4.44□□□□□ -1.7
PRPF3-204ENST00000470824 TTBK1Q5TCY1 1321 aaPredicted RBP4.44□□□□□ -1.7
PRPF3-204ENST00000470824 A0A1W2PPH5 198 aa4.43□□□□□ -1.7
PRPF3-204ENST00000470824 GAGE10A6NGK3 116 aa4.43□□□□□ -1.7
PRPF3-204ENST00000470824 C16orf96A6NNT2 1141 aa4.43□□□□□ -1.7
PRPF3-204ENST00000470824 TARM1B6A8C7 271 aa4.43□□□□□ -1.7
PRPF3-204ENST00000470824 MCIDASD6RGH6 385 aa4.43□□□□□ -1.7
PRPF3-204ENST00000470824 POC1B-GALNT4F8VUJ3 575 aa4.43□□□□□ -1.7
PRPF3-204ENST00000470824 SGPL1O95470 568 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms