RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 TBC1D31Q96DN5 1066 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 PRICKLE1Q96MT3 831 aaPredicted RBP8.56□□□□□ -1.04
GTF3A-206ENST00000470606 EMILIN2Q9BXX0 1053 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 SLC39A8Q9C0K1 460 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 MAN1C1Q9NR34 630 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 ANAPC5Q9UJX4 755 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 TPX2Q9ULW0 747 aaKnown RBP8.56□□□□□ -1.04
GTF3A-206ENST00000470606 ATP8A1Q9Y2Q0 1164 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 RWDD3Q9Y3V2 267 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 HBS1LQ9Y450 684 aaKnown RBP8.56□□□□□ -1.04
GTF3A-206ENST00000470606 NFS1Q9Y697 457 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 TRIOO75962 3097 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 C5orf60A6NFR6 353 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 DRGXA6NNA5 263 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 GOLGA8MH3BSY2 632 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 RFXAPO00287 272 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 LPXNO60711 386 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 GCATO75600 419 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 APOEP02649 317 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 ZNF135P52742 658 aaPredicted RBP8.56□□□□□ -1.04
GTF3A-206ENST00000470606 RPS24P62847 133 aaKnown RBP8.56□□□□□ -1.04
GTF3A-206ENST00000470606 NTHL1P78549 312 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 PPIDQ08752 370 aaKnown RBP8.56□□□□□ -1.04
GTF3A-206ENST00000470606 AP1B1Q10567 949 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 ZBTB17Q13105 803 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 CALCOCO2Q13137 446 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 KCNJ11Q14654 390 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 TAF12Q16514 161 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 CFAP52Q8N1V2 620 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 CNTD1Q8N815 330 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 RTL3Q8N8U3 475 aaKnown RBP8.56□□□□□ -1.04
GTF3A-206ENST00000470606 MAB21L3Q8N8X9 362 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 CCNYQ8ND76 341 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 GDPD5Q8WTR4 605 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 ZIM3Q96PE6 472 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 CORO1BQ9BR76 489 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 SLC46A2Q9BY10 475 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 SMG9Q9H0W8 520 aaKnown RBP8.56□□□□□ -1.04
GTF3A-206ENST00000470606 NKX2-4Q9H2Z4 354 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 PRDM16Q9HAZ2 1276 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 ETNK1Q9HBU6 452 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 TRPC7Q9HCX4 862 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 DNMT3BQ9UBC3 853 aaKnown RBP8.56□□□□□ -1.04
GTF3A-206ENST00000470606 AGO1Q9UL18 857 aaKnown RBP8.56□□□□□ -1.04
GTF3A-206ENST00000470606 HCFC2Q9Y5Z7 792 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.55□□□□□ -1.04
GTF3A-206ENST00000470606 WASH4PA8MWX3 477 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 RNF103O00237 685 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 GFRA2O00451 464 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 ATP8B1O43520 1251 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 ACSL4O60488 711 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 MAFKO60675 156 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 AVILO75366 819 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 SYF2O95926 243 aaKnown RBP8.55□□□□□ -1.04
GTF3A-206ENST00000470606 PEX11BO96011 259 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 LRG1P02750 347 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 IRF1P10914 325 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 HDCP19113 662 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 TACR2P21452 398 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 PTPN3P26045 913 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 CORO1AP31146 461 aaKnown RBP8.55□□□□□ -1.04
GTF3A-206ENST00000470606 CD68P34810 354 aaPredicted RBP8.55□□□□□ -1.04
GTF3A-206ENST00000470606 GRIA1P42261 906 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 EPHA5P54756 1037 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 PDK1Q15118 436 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 C5orf22Q49AR2 442 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 ANKRD20A2Q5SQ80 823 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 HP1BP3Q5SSJ5 553 aaPredicted RBP8.55□□□□□ -1.04
GTF3A-206ENST00000470606 FNBP1LQ5T0N5 605 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 ANKRD20A1Q5TYW2 823 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 ANKRD20A3Q5VUR7 823 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 NUGGCQ68CJ6 796 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 HEATR6Q6AI08 1181 aaKnown RBP8.55□□□□□ -1.04
GTF3A-206ENST00000470606 CCDC149Q6ZUS6 474 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 CCDC25Q86WR0 208 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 CDKL3Q8IVW4 592 aaPredicted RBP8.55□□□□□ -1.04
GTF3A-206ENST00000470606 ZNF567Q8N184 647 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 ZCCHC9Q8N567 271 aaKnown RBP8.55□□□□□ -1.04
GTF3A-206ENST00000470606 ATP6V0D2Q8N8Y2 350 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 SHKBP1Q8TBC3 707 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 ARNTL2Q8WYA1 636 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 ZNF707Q96C28 371 aaPredicted RBP8.55□□□□□ -1.04
GTF3A-206ENST00000470606 HDAC11Q96DB2 347 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 TMEM248Q9NWD8 314 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 PPARGC1AQ9UBK2 798 aaKnown RBP8.55□□□□□ -1.04
GTF3A-206ENST00000470606 CCL26Q9Y258 94 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 ASB3Q9Y575 518 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 DOCK8Q8NF50 2099 aa8.55□□□□□ -1.04
GTF3A-206ENST00000470606 A0A0A0MRY4 1105 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 CFAP69A5D8W1 941 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 SPDYE4A6NLX3 237 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 HACD1B0YJ81 288 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 FGF10O15520 208 aaPredicted RBP8.54□□□□□ -1.04
GTF3A-206ENST00000470606 SHBGP04278 402 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 MBL2P11226 248 aaPredicted RBP8.54□□□□□ -1.04
GTF3A-206ENST00000470606 MYL4P12829 197 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 RHOQP17081 205 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 PPP3CCP48454 512 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 BASP1P80723 227 aaKnown RBP8.54□□□□□ -1.04
GTF3A-206ENST00000470606 SMAD3P84022 425 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms