RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 HDAC7Q8WUI4 952 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 CENPIQ92674 756 aaPredicted RBP6.89□□□□□ -1.31
VAMP3-202ENST00000470357 NT5C3BQ969T7 300 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 PGAP3Q96FM1 320 aaPredicted RBP6.89□□□□□ -1.31
VAMP3-202ENST00000470357 ASIC4Q96FT7 647 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 TRMT2BQ96GJ1 504 aaKnown RBP6.89□□□□□ -1.31
VAMP3-202ENST00000470357 MSLNLQ96KJ4 702 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 RUNDC3BQ96NL0 473 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 CITED4Q96RK1 184 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 PRRX2Q99811 253 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 TCF25Q9BQ70 676 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 TTLL2Q9BWV7 592 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 RHOBTB2Q9BYZ6 727 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 TRIM7Q9C029 511 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 GOLPH3Q9H4A6 298 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 CYP4F11Q9HBI6 524 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 TLR8Q9NR97 1041 aaKnown RBP6.89□□□□□ -1.31
VAMP3-202ENST00000470357 LATS2Q9NRM7 1088 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 HOMER3Q9NSC5 361 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 TMEM30AQ9NV96 361 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 FAM86C1Q9NVL1 165 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 CLIC5Q9NZA1 410 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 TJP2Q9UDY2 1190 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 USP18Q9UMW8 372 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 EFR3BQ9Y2G0 817 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 ATG2AQ2TAZ0 1938 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 ANAPC1Q9H1A4 1944 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 EPG5Q9HCE0 2579 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 OBSL1O75147 1896 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 KMT2EQ8IZD2 1858 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.88□□□□□ -1.31
VAMP3-202ENST00000470357 FAM170AA1A519 330 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 SLC38A8A6NNN8 435 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 YJEFN3A6XGL0 299 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 EFCAB8A8MWE9 144 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 E7ENQ6 273 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 PDE2AO00408 941 aaPredicted RBP6.88□□□□□ -1.31
VAMP3-202ENST00000470357 MDM4O15151 490 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 TEX28O15482 410 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 GRAP2O75791 330 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 GJB6O95452 261 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 FGF19O95750 216 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 GLUD1P00367 558 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 KRT1P04264 644 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 TUBBP07437 444 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 CNPP09543 421 aaKnown RBP6.88□□□□□ -1.31
VAMP3-202ENST00000470357 SLC2A3P11169 496 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 NCAM1P13591 858 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 EDN3P14138 238 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 RPL17P18621 184 aaKnown RBP6.88□□□□□ -1.31
VAMP3-202ENST00000470357 KLRC2P26717 231 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 MIPP30301 263 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 CA8P35219 290 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 PTPN7P35236 360 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 SULT1E1P49888 294 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 DNA2P51530 1060 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 CACNA2D1P54289 1103 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 OGDHQ02218 1023 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 SLC25A11Q02978 314 aaKnown RBP6.88□□□□□ -1.31
VAMP3-202ENST00000470357 ZNF252P-AS1Q0IIN9 211 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 ADAM15Q13444 863 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 SETDB1Q15047 1291 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 PDK2Q15119 407 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 DDR2Q16832 855 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 ARL13BQ3SXY8 428 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 CCDC14Q49A88 953 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 PABPC1LQ4VXU2 614 aaKnown RBP6.88□□□□□ -1.31
VAMP3-202ENST00000470357 MSANTD2Q6P1R3 559 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 RSPO2Q6UXX9 243 aaPredicted RBP6.88□□□□□ -1.31
VAMP3-202ENST00000470357 EP400NLQ6ZTU2 488 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 RSRC2Q7L4I2 434 aaKnown RBP6.88□□□□□ -1.31
VAMP3-202ENST00000470357 GPRIN1Q7Z2K8 1008 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 CCDC50Q8IVM0 306 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 FBXL6Q8N531 539 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 MRPL43Q8N983 215 aaKnown RBP6.88□□□□□ -1.31
VAMP3-202ENST00000470357 LEMD2Q8NC56 503 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 STKLD1Q8NE28 680 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 SPPL3Q8TCT6 385 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 MICAL1Q8TDZ2 1067 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 POF1BQ8WVV4 589 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 FBXO32Q969P5 355 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 PPP2R3CQ969Q6 453 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 NTAN1Q96AB6 310 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 PIWIL1Q96J94 861 aaKnown RBP6.88□□□□□ -1.31
VAMP3-202ENST00000470357 MYRFLQ96LU7 910 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 CFAP57Q96MR6 1250 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 SERPINB11Q96P15 392 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 KLHL5Q96PQ7 755 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 FAM129BQ96TA1 746 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 NPY6RQ99463 290 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 FRMD8P1Q9BZ68 369 aaPredicted RBP6.88□□□□□ -1.31
VAMP3-202ENST00000470357 MUC3BQ9H195 1237 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 PLEKHA4Q9H4M7 779 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 FAM204AQ9H8W3 233 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 CLEC1BQ9P126 229 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 RCOR3Q9P2K3 495 aaPredicted RBP6.88□□□□□ -1.31
VAMP3-202ENST00000470357 FBXW11Q9UKB1 542 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 PACSIN2Q9UNF0 486 aaPredicted RBP6.88□□□□□ -1.31
VAMP3-202ENST00000470357 YIPF1Q9Y548 306 aa6.88□□□□□ -1.31
VAMP3-202ENST00000470357 CLUHO75153 1309 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms