RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 TAF3Q5VWG9 929 aa14.96□□□□□ -0.01
COL27A1-203ENST00000468565 PRR23CQ6ZRP0 262 aa14.96□□□□□ -0.01
COL27A1-203ENST00000468565 ERICH1Q86X53 443 aa14.96□□□□□ -0.01
COL27A1-203ENST00000468565 ATP6V0D2Q8N8Y2 350 aa14.96□□□□□ -0.01
COL27A1-203ENST00000468565 MSANTD4Q8NCY6 345 aa14.96□□□□□ -0.01
COL27A1-203ENST00000468565 SPAG5Q96R06 1193 aa14.96□□□□□ -0.01
COL27A1-203ENST00000468565 CIPCQ9C0C6 399 aa14.96□□□□□ -0.01
COL27A1-203ENST00000468565 ABCB8Q9NUT2 735 aa14.96□□□□□ -0.01
COL27A1-203ENST00000468565 DDIT4Q9NX09 232 aa14.96□□□□□ -0.01
COL27A1-203ENST00000468565 RRN3Q9NYV6 651 aa14.96□□□□□ -0.01
COL27A1-203ENST00000468565 CALCOCO1Q9P1Z2 691 aa14.96□□□□□ -0.01
COL27A1-203ENST00000468565 SLC12A6Q9UHW9 1150 aa14.96□□□□□ -0.01
COL27A1-203ENST00000468565 GGA2Q9UJY4 613 aa14.96□□□□□ -0.01
COL27A1-203ENST00000468565 INVSQ9Y283 1065 aa14.96□□□□□ -0.01
COL27A1-203ENST00000468565 NYNRINQ9P2P1 1898 aaKnown RBP14.96□□□□□ -0.01
COL27A1-203ENST00000468565 KCNU1A8MYU2 1149 aa14.96□□□□□ -0.02
COL27A1-203ENST00000468565 WASH3PC4AMC7 463 aa14.96□□□□□ -0.02
COL27A1-203ENST00000468565 KRT86O43790 486 aa14.96□□□□□ -0.02
COL27A1-203ENST00000468565 ZNF217O75362 1048 aa14.96□□□□□ -0.02
COL27A1-203ENST00000468565 GRAP2O75791 330 aa14.96□□□□□ -0.02
COL27A1-203ENST00000468565 GFPT2O94808 682 aa14.96□□□□□ -0.02
COL27A1-203ENST00000468565 ZNF806P0C7X5 589 aa14.96□□□□□ -0.02
COL27A1-203ENST00000468565 NDUFV2P19404 249 aa14.96□□□□□ -0.02
COL27A1-203ENST00000468565 HNRNPH3P31942 346 aaKnown RBP14.96□□□□□ -0.02
COL27A1-203ENST00000468565 CCR1P32246 355 aa14.96□□□□□ -0.02
COL27A1-203ENST00000468565 STAT1P42224 750 aa14.96□□□□□ -0.02
COL27A1-203ENST00000468565 NOMO3P69849 1222 aa14.96□□□□□ -0.02
COL27A1-203ENST00000468565 CDR2Q01850 454 aa14.96□□□□□ -0.02
COL27A1-203ENST00000468565 PDAP1Q13442 181 aaKnown RBP14.96□□□□□ -0.02
COL27A1-203ENST00000468565 WHAMMP3Q1A5X7 153 aa14.96□□□□□ -0.02
COL27A1-203ENST00000468565 CHST9Q7L1S5 443 aa14.96□□□□□ -0.02
COL27A1-203ENST00000468565 ADIPOR2Q86V24 386 aa14.96□□□□□ -0.02
COL27A1-203ENST00000468565 NEK11Q8NG66 645 aa14.96□□□□□ -0.02
COL27A1-203ENST00000468565 FIBINQ8TAL6 211 aa14.96□□□□□ -0.02
COL27A1-203ENST00000468565 RMDN1Q96DB5 314 aa14.96□□□□□ -0.02
COL27A1-203ENST00000468565 C18orf8Q96DM3 657 aa14.96□□□□□ -0.02
COL27A1-203ENST00000468565 NLRC4Q9NPP4 1024 aa14.96□□□□□ -0.02
COL27A1-203ENST00000468565 GUCA1BQ9UMX6 200 aa14.96□□□□□ -0.02
COL27A1-203ENST00000468565 RAD54BQ9Y620 910 aa14.96□□□□□ -0.02
COL27A1-203ENST00000468565 MMEP08473 750 aa14.95□□□□□ -0.02
COL27A1-203ENST00000468565 TACR2P21452 398 aa14.95□□□□□ -0.02
COL27A1-203ENST00000468565 MPLP40238 635 aa14.95□□□□□ -0.02
COL27A1-203ENST00000468565 MATKP42679 507 aa14.95□□□□□ -0.02
COL27A1-203ENST00000468565 CLCN6P51797 869 aa14.95□□□□□ -0.02
COL27A1-203ENST00000468565 RPS24P62847 133 aaKnown RBP14.95□□□□□ -0.02
COL27A1-203ENST00000468565 ARID5AQ03989 594 aa14.95□□□□□ -0.02
COL27A1-203ENST00000468565 SPA17Q15506 151 aa14.95□□□□□ -0.02
COL27A1-203ENST00000468565 SPDYCQ5MJ68 293 aa14.95□□□□□ -0.02
COL27A1-203ENST00000468565 CCDC122Q5T0U0 273 aa14.95□□□□□ -0.02
COL27A1-203ENST00000468565 TMCO3Q6UWJ1 677 aa14.95□□□□□ -0.02
COL27A1-203ENST00000468565 XYLT1Q86Y38 959 aa14.95□□□□□ -0.02
COL27A1-203ENST00000468565 MFN1Q8IWA4 741 aa14.95□□□□□ -0.02
COL27A1-203ENST00000468565 WFDC5Q8TCV5 224 aa14.95□□□□□ -0.02
COL27A1-203ENST00000468565 RLN3Q8WXF3 142 aa14.95□□□□□ -0.02
COL27A1-203ENST00000468565 LMLNQ96KR4 655 aa14.95□□□□□ -0.02
COL27A1-203ENST00000468565 TSGA10Q9BZW7 698 aa14.95□□□□□ -0.02
COL27A1-203ENST00000468565 TMEM51Q9NW97 253 aa14.95□□□□□ -0.02
COL27A1-203ENST00000468565 DLL3Q9NYJ7 618 aa14.95□□□□□ -0.02
COL27A1-203ENST00000468565 XPO7Q9UIA9 1087 aaKnown RBP14.95□□□□□ -0.02
COL27A1-203ENST00000468565 MBD1Q9UIS9 605 aaPredicted RBP14.95□□□□□ -0.02
COL27A1-203ENST00000468565 DOCK4Q8N1I0 1966 aa14.95□□□□□ -0.02
COL27A1-203ENST00000468565 BCLAF3A2AJT9 711 aaKnown RBP14.94□□□□□ -0.02
COL27A1-203ENST00000468565 CYP1A1P04798 512 aaPredicted RBP14.94□□□□□ -0.02
COL27A1-203ENST00000468565 ABCB4P21439 1286 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 CD70P32970 193 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 PUM1Q14671 1186 aaKnown RBP eCLIP14.94□□□□□ -0.02
COL27A1-203ENST00000468565 RSPO4Q2I0M5 234 aaPredicted RBP14.94□□□□□ -0.02
COL27A1-203ENST00000468565 RAP1GAP2Q684P5 730 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 MBLAC2Q68D91 279 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 SLC36A4Q6YBV0 504 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 LPCAT2Q7L5N7 544 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 METTL3Q86U44 580 aaKnown RBP14.94□□□□□ -0.02
COL27A1-203ENST00000468565 CHSY1Q86X52 802 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 CCDC117Q8IWD4 279 aaPredicted RBP14.94□□□□□ -0.02
COL27A1-203ENST00000468565 SORCS1Q8WY21 1168 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 MYEOVQ96EZ4 313 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 MRGPRX1Q96LB2 322 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 CCDC42Q96M95 316 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 PRMT1Q99873 361 aaKnown RBP14.94□□□□□ -0.02
COL27A1-203ENST00000468565 VPS45Q9NRW7 570 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.94□□□□□ -0.02
COL27A1-203ENST00000468565 STIM2Q9P246 746 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 STAP1Q9ULZ2 295 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.94□□□□□ -0.02
COL27A1-203ENST00000468565 F5H5T6 163 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 LUC7L3O95232 432 aaKnown RBP14.94□□□□□ -0.02
COL27A1-203ENST00000468565 PRKCHP24723 683 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 FMO1Q01740 532 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 CREB5Q02930 508 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 FUT11Q495W5 492 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 TTC39BQ5VTQ0 682 aaPredicted RBP14.94□□□□□ -0.02
COL27A1-203ENST00000468565 TRIM72Q6ZMU5 477 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 LGI2Q8N0V4 545 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 NETO1Q8TDF5 533 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 SLC20A1Q8WUM9 679 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 RNF34Q969K3 372 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 NT5C3BQ969T7 300 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 PGAP3Q96FM1 320 aaPredicted RBP14.94□□□□□ -0.02
COL27A1-203ENST00000468565 NPY6RQ99463 290 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 MFRPQ9BY79 579 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms