RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 TCTN3Q6NUS6 607 aa13.15□□□□□ -0.3
UBR4-210ENST00000466969 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.15□□□□□ -0.3
UBR4-210ENST00000466969 TMPRSS9Q7Z410 1059 aa13.15□□□□□ -0.3
UBR4-210ENST00000466969 AADATQ8N5Z0 425 aa13.15□□□□□ -0.3
UBR4-210ENST00000466969 SNX29Q8TEQ0 813 aa13.15□□□□□ -0.3
UBR4-210ENST00000466969 TNFRSF25Q93038 417 aa13.15□□□□□ -0.3
UBR4-210ENST00000466969 NKD1Q969G9 470 aa13.15□□□□□ -0.3
UBR4-210ENST00000466969 JAKMIP1Q96N16 626 aaKnown RBP13.15□□□□□ -0.3
UBR4-210ENST00000466969 MYOCQ99972 504 aa13.15□□□□□ -0.3
UBR4-210ENST00000466969 SLC29A3Q9BZD2 475 aa13.15□□□□□ -0.3
UBR4-210ENST00000466969 DCLK3Q9C098 648 aa13.15□□□□□ -0.3
UBR4-210ENST00000466969 FBXO44Q9H4M3 255 aa13.15□□□□□ -0.3
UBR4-210ENST00000466969 SLC5A6Q9Y289 635 aa13.15□□□□□ -0.3
UBR4-210ENST00000466969 CSNK1G3Q9Y6M4 447 aa13.15□□□□□ -0.3
UBR4-210ENST00000466969 ATP8B3O60423 1300 aa13.14□□□□□ -0.31
UBR4-210ENST00000466969 D6RAR5 112 aa13.14□□□□□ -0.31
UBR4-210ENST00000466969 ADH1BP00325 375 aa13.14□□□□□ -0.31
UBR4-210ENST00000466969 KLKB1P03952 638 aa13.14□□□□□ -0.31
UBR4-210ENST00000466969 POLR2EP19388 210 aaKnown RBP13.14□□□□□ -0.31
UBR4-210ENST00000466969 C5AR1P21730 350 aa13.14□□□□□ -0.31
UBR4-210ENST00000466969 SCP2P22307 547 aa13.14□□□□□ -0.31
UBR4-210ENST00000466969 ETV5P41161 510 aa13.14□□□□□ -0.31
UBR4-210ENST00000466969 PGFP49763 221 aa13.14□□□□□ -0.31
UBR4-210ENST00000466969 EVCP57679 992 aa13.14□□□□□ -0.31
UBR4-210ENST00000466969 DEFB109BQ30KR1 87 aa13.14□□□□□ -0.31
UBR4-210ENST00000466969 C10orf120Q5SQS8 335 aa13.14□□□□□ -0.31
UBR4-210ENST00000466969 SLFN12LQ6IEE8 588 aa13.14□□□□□ -0.31
UBR4-210ENST00000466969 SLC39A4Q6P5W5 647 aa13.14□□□□□ -0.31
UBR4-210ENST00000466969 KLHDC10Q6PID8 442 aa13.14□□□□□ -0.31
UBR4-210ENST00000466969 ADIPOR2Q86V24 386 aa13.14□□□□□ -0.31
UBR4-210ENST00000466969 CCDC13Q8IYE1 715 aa13.14□□□□□ -0.31
UBR4-210ENST00000466969 PPP1R13BQ96KQ4 1090 aa13.14□□□□□ -0.31
UBR4-210ENST00000466969 LURAP1Q96LR2 239 aa13.14□□□□□ -0.31
UBR4-210ENST00000466969 CMKLR1Q99788 373 aa13.14□□□□□ -0.31
UBR4-210ENST00000466969 ABCB8Q9NUT2 735 aa13.14□□□□□ -0.31
UBR4-210ENST00000466969 GGA2Q9UJY4 613 aa13.14□□□□□ -0.31
UBR4-210ENST00000466969 MAP4K5Q9Y4K4 846 aa13.14□□□□□ -0.31
UBR4-210ENST00000466969 HEATR9A2RTY3 570 aa13.13□□□□□ -0.31
UBR4-210ENST00000466969 TCP11X1B4DZS4 312 aa13.13□□□□□ -0.31
UBR4-210ENST00000466969 K7ENM7 598 aa13.13□□□□□ -0.31
UBR4-210ENST00000466969 NKX2-8O15522 239 aa13.13□□□□□ -0.31
UBR4-210ENST00000466969 AQP9O43315 295 aa13.13□□□□□ -0.31
UBR4-210ENST00000466969 CDKL5O76039 1030 aa13.13□□□□□ -0.31
UBR4-210ENST00000466969 PABPC1P11940 636 aaKnown RBP13.13□□□□□ -0.31
UBR4-210ENST00000466969 CORO1AP31146 461 aaKnown RBP13.13□□□□□ -0.31
UBR4-210ENST00000466969 LEPRP48357 1165 aaKnown RBP13.13□□□□□ -0.31
UBR4-210ENST00000466969 HNRNPA1L2Q32P51 320 aaKnown RBP13.13□□□□□ -0.31
UBR4-210ENST00000466969 MPPE1Q53F39 396 aa13.13□□□□□ -0.31
UBR4-210ENST00000466969 SP5Q6BEB4 398 aaPredicted RBP13.13□□□□□ -0.31
UBR4-210ENST00000466969 LIMS2Q7Z4I7 341 aa13.13□□□□□ -0.31
UBR4-210ENST00000466969 TADA2BQ86TJ2 420 aa13.13□□□□□ -0.31
UBR4-210ENST00000466969 TRIM69Q86WT6 500 aa13.13□□□□□ -0.31
UBR4-210ENST00000466969 CPXM2Q8N436 756 aa13.13□□□□□ -0.31
UBR4-210ENST00000466969 OR13H1Q8NG92 308 aa13.13□□□□□ -0.31
UBR4-210ENST00000466969 PTPRN2Q92932 1015 aa13.13□□□□□ -0.31
UBR4-210ENST00000466969 KCNN1Q92952 543 aa13.13□□□□□ -0.31
UBR4-210ENST00000466969 MED10Q9BTT4 135 aa13.13□□□□□ -0.31
UBR4-210ENST00000466969 B3GNT5Q9BYG0 378 aa13.13□□□□□ -0.31
UBR4-210ENST00000466969 B3GNT4Q9C0J1 378 aa13.13□□□□□ -0.31
UBR4-210ENST00000466969 CDH19Q9H159 772 aa13.13□□□□□ -0.31
UBR4-210ENST00000466969 DMAP1Q9NPF5 467 aaPredicted RBP13.13□□□□□ -0.31
UBR4-210ENST00000466969 GGT7Q9UJ14 662 aa13.13□□□□□ -0.31
UBR4-210ENST00000466969 NUDT5Q9UKK9 219 aa13.13□□□□□ -0.31
UBR4-210ENST00000466969 K7EM74 188 aa13.12□□□□□ -0.31
UBR4-210ENST00000466969 TPP1O14773 563 aa13.12□□□□□ -0.31
UBR4-210ENST00000466969 HMBSP08397 361 aa13.12□□□□□ -0.31
UBR4-210ENST00000466969 DRD2P14416 443 aa13.12□□□□□ -0.31
UBR4-210ENST00000466969 RPS6KB1P23443 525 aa13.12□□□□□ -0.31
UBR4-210ENST00000466969 COPB1P53618 953 aaKnown RBP13.12□□□□□ -0.31
UBR4-210ENST00000466969 COG7P83436 770 aa13.12□□□□□ -0.31
UBR4-210ENST00000466969 CDC20Q12834 499 aa13.12□□□□□ -0.31
UBR4-210ENST00000466969 SCARA3Q6AZY7 606 aa13.12□□□□□ -0.31
UBR4-210ENST00000466969 DENND1CQ8IV53 801 aa13.12□□□□□ -0.31
UBR4-210ENST00000466969 TMEM145Q8NBT3 493 aa13.12□□□□□ -0.31
UBR4-210ENST00000466969 HPDLQ96IR7 371 aa13.12□□□□□ -0.31
UBR4-210ENST00000466969 AGO1Q9UL18 857 aaKnown RBP13.12□□□□□ -0.31
UBR4-210ENST00000466969 PADI4Q9UM07 663 aa13.12□□□□□ -0.31
UBR4-210ENST00000466969 SHANK1Q9Y566 2161 aa13.12□□□□□ -0.31
UBR4-210ENST00000466969 ANKRD63C9JTQ0 380 aa13.11□□□□□ -0.31
UBR4-210ENST00000466969 SLC31A1O15431 190 aa13.11□□□□□ -0.31
UBR4-210ENST00000466969 FAM155BO75949 473 aa13.11□□□□□ -0.31
UBR4-210ENST00000466969 IL1BP01584 269 aa13.11□□□□□ -0.31
UBR4-210ENST00000466969 TMEM191BP0C7N4 346 aa13.11□□□□□ -0.31
UBR4-210ENST00000466969 HOXD9P28356 352 aaPredicted RBP13.11□□□□□ -0.31
UBR4-210ENST00000466969 STK3Q13188 491 aa13.11□□□□□ -0.31
UBR4-210ENST00000466969 TESK1Q15569 626 aa13.11□□□□□ -0.31
UBR4-210ENST00000466969 KMT5BQ4FZB7 885 aa13.11□□□□□ -0.31
UBR4-210ENST00000466969 C9orf64Q5T6V5 341 aa13.11□□□□□ -0.31
UBR4-210ENST00000466969 ESRP1Q6NXG1 681 aaKnown RBP13.11□□□□□ -0.31
UBR4-210ENST00000466969 CRELD2Q6UXH1 353 aaPredicted RBP13.11□□□□□ -0.31
UBR4-210ENST00000466969 GDF7Q7Z4P5 450 aa13.11□□□□□ -0.31
UBR4-210ENST00000466969 ZC3H3Q8IXZ2 948 aaKnown RBP13.11□□□□□ -0.31
UBR4-210ENST00000466969 SLC35F3Q8IY50 421 aa13.11□□□□□ -0.31
UBR4-210ENST00000466969 B3GALNT2Q8NCR0 500 aa13.11□□□□□ -0.31
UBR4-210ENST00000466969 CXorf38Q8TB03 319 aa13.11□□□□□ -0.31
UBR4-210ENST00000466969 LMX1AQ8TE12 382 aa13.11□□□□□ -0.31
UBR4-210ENST00000466969 SLC45A3Q96JT2 553 aa13.11□□□□□ -0.31
UBR4-210ENST00000466969 HAPLN3Q96S86 360 aa13.11□□□□□ -0.31
UBR4-210ENST00000466969 BOCQ9BWV1 1114 aa13.11□□□□□ -0.31
UBR4-210ENST00000466969 SRRTQ9BXP5 876 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms