RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 POLR3BQ9NW08 1133 aaPredicted RBP19.51■□□□□ 0.71
LMNB1-204ENST00000463908 TBC1D30Q9Y2I9 924 aa19.51■□□□□ 0.71
LMNB1-204ENST00000463908 KIAA1549LQ6ZVL6 1849 aa19.51■□□□□ 0.71
LMNB1-204ENST00000463908 A0A0A6YYK5 440 aaPredicted RBP19.5■□□□□ 0.71
LMNB1-204ENST00000463908 A0A1B0GVM2 712 aa19.5■□□□□ 0.71
LMNB1-204ENST00000463908 TCAF2A6NFQ2 919 aa19.5■□□□□ 0.71
LMNB1-204ENST00000463908 H0Y626 953 aa19.5■□□□□ 0.71
LMNB1-204ENST00000463908 CLDN11O75508 207 aa19.5■□□□□ 0.71
LMNB1-204ENST00000463908 RARAP10276 462 aa19.5■□□□□ 0.71
LMNB1-204ENST00000463908 PABPC1P11940 636 aaKnown RBP19.5■□□□□ 0.71
LMNB1-204ENST00000463908 VAV2P52735 878 aa19.5■□□□□ 0.71
LMNB1-204ENST00000463908 HADHBP55084 474 aaKnown RBP19.5■□□□□ 0.71
LMNB1-204ENST00000463908 KRT83P78385 493 aa19.5■□□□□ 0.71
LMNB1-204ENST00000463908 ATP13A4Q4VNC1 1196 aa19.5■□□□□ 0.71
LMNB1-204ENST00000463908 BOLA3Q53S33 107 aa19.5■□□□□ 0.71
LMNB1-204ENST00000463908 C2orf27AQ580R0 203 aa19.5■□□□□ 0.71
LMNB1-204ENST00000463908 DTWD2Q8NBA8 298 aa19.5■□□□□ 0.71
LMNB1-204ENST00000463908 ALG14Q96F25 216 aa19.5■□□□□ 0.71
LMNB1-204ENST00000463908 ZYG11BQ9C0D3 744 aa19.5■□□□□ 0.71
LMNB1-204ENST00000463908 ZWILCHQ9H900 591 aa19.5■□□□□ 0.71
LMNB1-204ENST00000463908 LUC7LQ9NQ29 371 aaKnown RBP19.5■□□□□ 0.71
LMNB1-204ENST00000463908 GGA2Q9UJY4 613 aa19.5■□□□□ 0.71
LMNB1-204ENST00000463908 AP4E1Q9UPM8 1137 aa19.5■□□□□ 0.71
LMNB1-204ENST00000463908 ADGRG1Q9Y653 693 aa19.5■□□□□ 0.71
LMNB1-204ENST00000463908 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.49■□□□□ 0.71
LMNB1-204ENST00000463908 TMEM110-MUSTN1A8MSY1 372 aa19.49■□□□□ 0.71
LMNB1-204ENST00000463908 CHURC1-FNTBB4DL54 471 aa19.49■□□□□ 0.71
LMNB1-204ENST00000463908 ARHGAP6O43182 974 aa19.49■□□□□ 0.71
LMNB1-204ENST00000463908 IPO7O95373 1038 aaKnown RBP19.49■□□□□ 0.71
LMNB1-204ENST00000463908 MZF1P28698 734 aaPredicted RBP19.49■□□□□ 0.71
LMNB1-204ENST00000463908 MAN1A1P33908 653 aa19.49■□□□□ 0.71
LMNB1-204ENST00000463908 TIE1P35590 1138 aa19.49■□□□□ 0.71
LMNB1-204ENST00000463908 NOP2P46087 812 aaKnown RBP19.49■□□□□ 0.71
LMNB1-204ENST00000463908 ZNF177Q13360 481 aaPredicted RBP19.49■□□□□ 0.71
LMNB1-204ENST00000463908 CDH18Q13634 790 aa19.49■□□□□ 0.71
LMNB1-204ENST00000463908 MAMSTRQ6ZN01 415 aa19.49■□□□□ 0.71
LMNB1-204ENST00000463908 ANKS1BQ7Z6G8 1248 aa19.49■□□□□ 0.71
LMNB1-204ENST00000463908 NLRP14Q86W24 1093 aa19.49■□□□□ 0.71
LMNB1-204ENST00000463908 PSTKQ8IV42 348 aaKnown RBP19.49■□□□□ 0.71
LMNB1-204ENST00000463908 APCDD1Q8J025 514 aa19.49■□□□□ 0.71
LMNB1-204ENST00000463908 CCDC112Q8NEF3 446 aa19.49■□□□□ 0.71
LMNB1-204ENST00000463908 KCTD15Q96SI1 283 aaPredicted RBP19.49■□□□□ 0.71
LMNB1-204ENST00000463908 ACOX2Q99424 681 aa19.49■□□□□ 0.71
LMNB1-204ENST00000463908 KCNH6Q9H252 994 aa19.49■□□□□ 0.71
LMNB1-204ENST00000463908 DHX35Q9H5Z1 703 aaKnown RBP19.49■□□□□ 0.71
LMNB1-204ENST00000463908 NDFIP2Q9NV92 336 aa19.49■□□□□ 0.71
LMNB1-204ENST00000463908 ELOVL2Q9NXB9 296 aa19.49■□□□□ 0.71
LMNB1-204ENST00000463908 KIAA1522Q9P206 1035 aaPredicted RBP19.49■□□□□ 0.71
LMNB1-204ENST00000463908 LCMT1Q9UIC8 334 aa19.49■□□□□ 0.71
LMNB1-204ENST00000463908 BTNL10A8MVZ5 291 aa19.48■□□□□ 0.71
LMNB1-204ENST00000463908 TIMM44O43615 452 aa19.48■□□□□ 0.71
LMNB1-204ENST00000463908 CREB3O43889 395 aa19.48■□□□□ 0.71
LMNB1-204ENST00000463908 HOXC13P31276 330 aa19.48■□□□□ 0.71
LMNB1-204ENST00000463908 MAGEA9P43362 315 aa19.48■□□□□ 0.71
LMNB1-204ENST00000463908 PLK1P53350 603 aa19.48■□□□□ 0.71
LMNB1-204ENST00000463908 MRPS21P82921 87 aaKnown RBP19.48■□□□□ 0.71
LMNB1-204ENST00000463908 SMTNL2Q2TAL5 461 aa19.48■□□□□ 0.71
LMNB1-204ENST00000463908 FUT11Q495W5 492 aa19.48■□□□□ 0.71
LMNB1-204ENST00000463908 EGFLAMQ63HQ2 1017 aa19.48■□□□□ 0.71
LMNB1-204ENST00000463908 MBLAC2Q68D91 279 aa19.48■□□□□ 0.71
LMNB1-204ENST00000463908 RWDD4Q6NW29 188 aaKnown RBP19.48■□□□□ 0.71
LMNB1-204ENST00000463908 NUDT18Q6ZVK8 323 aa19.48■□□□□ 0.71
LMNB1-204ENST00000463908 TFAP2DQ7Z6R9 452 aa19.48■□□□□ 0.71
LMNB1-204ENST00000463908 MAML2Q8IZL2 1156 aaPredicted RBP19.48■□□□□ 0.71
LMNB1-204ENST00000463908 ZNF557Q8N988 423 aaPredicted RBP19.48■□□□□ 0.71
LMNB1-204ENST00000463908 IL17RCQ8NAC3 791 aa19.48■□□□□ 0.71
LMNB1-204ENST00000463908 RPLP0P6Q8NHW5 317 aa19.48■□□□□ 0.71
LMNB1-204ENST00000463908 KCNV2Q8TDN2 545 aa19.48■□□□□ 0.71
LMNB1-204ENST00000463908 SORCS1Q8WY21 1168 aa19.48■□□□□ 0.71
LMNB1-204ENST00000463908 TTC17Q96AE7 1141 aa19.48■□□□□ 0.71
LMNB1-204ENST00000463908 TBC1D31Q96DN5 1066 aa19.48■□□□□ 0.71
LMNB1-204ENST00000463908 HYOU1Q9Y4L1 999 aa19.48■□□□□ 0.71
LMNB1-204ENST00000463908 OR51B4Q9Y5P0 310 aa19.48■□□□□ 0.71
LMNB1-204ENST00000463908 BUB1BO60566 1050 aaPredicted RBP19.47■□□□□ 0.71
LMNB1-204ENST00000463908 ADAM23O75077 832 aa19.47■□□□□ 0.71
LMNB1-204ENST00000463908 RHOQP17081 205 aa19.47■□□□□ 0.71
LMNB1-204ENST00000463908 CSKP41240 450 aa19.47■□□□□ 0.71
LMNB1-204ENST00000463908 NUMBP49757 651 aa19.47■□□□□ 0.71
LMNB1-204ENST00000463908 ARSEP51690 589 aa19.47■□□□□ 0.71
LMNB1-204ENST00000463908 DPYSL2Q16555 572 aa19.47■□□□□ 0.71
LMNB1-204ENST00000463908 PITRM1Q5JRX3 1037 aa19.47■□□□□ 0.71
LMNB1-204ENST00000463908 CCDC117Q8IWD4 279 aaPredicted RBP19.47■□□□□ 0.71
LMNB1-204ENST00000463908 AHI1Q8N157 1196 aa19.47■□□□□ 0.71
LMNB1-204ENST00000463908 SPEM1Q8N4L4 309 aa19.47■□□□□ 0.71
LMNB1-204ENST00000463908 CCDC33Q8N5R6 958 aa19.47■□□□□ 0.71
LMNB1-204ENST00000463908 ALLCQ8N6M5 410 aa19.47■□□□□ 0.71
LMNB1-204ENST00000463908 WFIKKN2Q8TEU8 576 aa19.47■□□□□ 0.71
LMNB1-204ENST00000463908 TEKT4Q8WW24 435 aa19.47■□□□□ 0.71
LMNB1-204ENST00000463908 HSPH1Q92598 858 aa19.47■□□□□ 0.71
LMNB1-204ENST00000463908 FEM1AQ9BSK4 669 aa19.47■□□□□ 0.71
LMNB1-204ENST00000463908 CWC15Q9P013 229 aaKnown RBP19.47■□□□□ 0.71
LMNB1-204ENST00000463908 TRIM10Q9UDY6 481 aa19.47■□□□□ 0.71
LMNB1-204ENST00000463908 ALG6Q9Y672 507 aa19.47■□□□□ 0.71
LMNB1-204ENST00000463908 ZDBF2Q9HCK1 2354 aa19.46■□□□□ 0.71
LMNB1-204ENST00000463908 BUB1O43683 1085 aa19.46■□□□□ 0.71
LMNB1-204ENST00000463908 HNRNPLP14866 589 aaKnown RBP eCLIP19.46■□□□□ 0.71
LMNB1-204ENST00000463908 GOT1P17174 413 aa19.46■□□□□ 0.71
LMNB1-204ENST00000463908 COMTP21964 271 aa19.46■□□□□ 0.71
LMNB1-204ENST00000463908 IL4RP24394 825 aa19.46■□□□□ 0.71
LMNB1-204ENST00000463908 EPHB2P29323 1055 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms