RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 ERRFI1Q9UJM3 462 aaPredicted RBP13.93□□□□□ -0.18
C9orf3-211ENST00000463372 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.92□□□□□ -0.18
C9orf3-211ENST00000463372 NTN3O00634 580 aaPredicted RBP13.92□□□□□ -0.18
C9orf3-211ENST00000463372 ADH1BP00325 375 aa13.92□□□□□ -0.18
C9orf3-211ENST00000463372 NR1D1P20393 614 aa13.92□□□□□ -0.18
C9orf3-211ENST00000463372 C5AR1P21730 350 aa13.92□□□□□ -0.18
C9orf3-211ENST00000463372 NOS2P35228 1153 aa13.92□□□□□ -0.18
C9orf3-211ENST00000463372 NUGGCQ68CJ6 796 aa13.92□□□□□ -0.18
C9orf3-211ENST00000463372 MBLAC2Q68D91 279 aa13.92□□□□□ -0.18
C9orf3-211ENST00000463372 SCARA3Q6AZY7 606 aa13.92□□□□□ -0.18
C9orf3-211ENST00000463372 KLHDC10Q6PID8 442 aa13.92□□□□□ -0.18
C9orf3-211ENST00000463372 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.92□□□□□ -0.18
C9orf3-211ENST00000463372 TTC13Q8NBP0 860 aa13.92□□□□□ -0.18
C9orf3-211ENST00000463372 TMEM159Q96B96 161 aa13.92□□□□□ -0.18
C9orf3-211ENST00000463372 HPDLQ96IR7 371 aa13.92□□□□□ -0.18
C9orf3-211ENST00000463372 IL12RB2Q99665 862 aa13.92□□□□□ -0.18
C9orf3-211ENST00000463372 MED10Q9BTT4 135 aa13.92□□□□□ -0.18
C9orf3-211ENST00000463372 DMAP1Q9NPF5 467 aaPredicted RBP13.92□□□□□ -0.18
C9orf3-211ENST00000463372 ABCB8Q9NUT2 735 aa13.92□□□□□ -0.18
C9orf3-211ENST00000463372 GGA2Q9UJY4 613 aa13.92□□□□□ -0.18
C9orf3-211ENST00000463372 NUDT5Q9UKK9 219 aa13.92□□□□□ -0.18
C9orf3-211ENST00000463372 ENTPD4Q9Y227 616 aa13.92□□□□□ -0.18
C9orf3-211ENST00000463372 CSNK1G3Q9Y6M4 447 aa13.92□□□□□ -0.18
C9orf3-211ENST00000463372 ANKRD63C9JTQ0 380 aa13.91□□□□□ -0.18
C9orf3-211ENST00000463372 D6RAR5 112 aa13.91□□□□□ -0.18
C9orf3-211ENST00000463372 H3BM21 787 aa13.91□□□□□ -0.18
C9orf3-211ENST00000463372 AGRPO00253 132 aa13.91□□□□□ -0.18
C9orf3-211ENST00000463372 LIFP15018 202 aa13.91□□□□□ -0.18
C9orf3-211ENST00000463372 CORO1AP31146 461 aaKnown RBP13.91□□□□□ -0.18
C9orf3-211ENST00000463372 CCKBRP32239 447 aa13.91□□□□□ -0.18
C9orf3-211ENST00000463372 DEFB133Q30KQ1 61 aa13.91□□□□□ -0.18
C9orf3-211ENST00000463372 HNRNPA1L2Q32P51 320 aaKnown RBP13.91□□□□□ -0.18
C9orf3-211ENST00000463372 MPPE1Q53F39 396 aa13.91□□□□□ -0.18
C9orf3-211ENST00000463372 CRELD2Q6UXH1 353 aaPredicted RBP13.91□□□□□ -0.18
C9orf3-211ENST00000463372 TADA2BQ86TJ2 420 aa13.91□□□□□ -0.18
C9orf3-211ENST00000463372 TRIM69Q86WT6 500 aa13.91□□□□□ -0.18
C9orf3-211ENST00000463372 CPXM2Q8N436 756 aa13.91□□□□□ -0.18
C9orf3-211ENST00000463372 CXorf38Q8TB03 319 aa13.91□□□□□ -0.18
C9orf3-211ENST00000463372 WASF1Q92558 559 aa13.91□□□□□ -0.18
C9orf3-211ENST00000463372 ZNF274Q96GC6 653 aaPredicted RBP13.91□□□□□ -0.18
C9orf3-211ENST00000463372 TCTN2Q96GX1 697 aa13.91□□□□□ -0.18
C9orf3-211ENST00000463372 C5orf34Q96MH7 638 aa13.91□□□□□ -0.18
C9orf3-211ENST00000463372 EPAS1Q99814 870 aa13.91□□□□□ -0.18
C9orf3-211ENST00000463372 MYOCQ99972 504 aa13.91□□□□□ -0.18
C9orf3-211ENST00000463372 REPIN1Q9BWE0 567 aaKnown RBP13.91□□□□□ -0.18
C9orf3-211ENST00000463372 C9orf172C9J069 976 aa13.9□□□□□ -0.18
C9orf3-211ENST00000463372 CAPN5O15484 640 aaPredicted RBP13.9□□□□□ -0.18
C9orf3-211ENST00000463372 TMEM191BP0C7N4 346 aa13.9□□□□□ -0.18
C9orf3-211ENST00000463372 PRKAR1AP10644 381 aa13.9□□□□□ -0.18
C9orf3-211ENST00000463372 PABPC1P11940 636 aaKnown RBP13.9□□□□□ -0.18
C9orf3-211ENST00000463372 FXR2P51116 673 aaKnown RBP eCLIP13.9□□□□□ -0.18
C9orf3-211ENST00000463372 COG7P83436 770 aa13.9□□□□□ -0.18
C9orf3-211ENST00000463372 ASB18Q6ZVZ8 466 aa13.9□□□□□ -0.18
C9orf3-211ENST00000463372 TMPRSS9Q7Z410 1059 aa13.9□□□□□ -0.18
C9orf3-211ENST00000463372 DENND1CQ8IV53 801 aa13.9□□□□□ -0.18
C9orf3-211ENST00000463372 TP53INP2Q8IXH6 220 aa13.9□□□□□ -0.18
C9orf3-211ENST00000463372 ZNF276Q8N554 614 aa13.9□□□□□ -0.18
C9orf3-211ENST00000463372 OR13H1Q8NG92 308 aa13.9□□□□□ -0.18
C9orf3-211ENST00000463372 POMGNT1Q8WZA1 660 aa13.9□□□□□ -0.18
C9orf3-211ENST00000463372 NKD1Q969G9 470 aa13.9□□□□□ -0.18
C9orf3-211ENST00000463372 PPP1R13BQ96KQ4 1090 aa13.9□□□□□ -0.18
C9orf3-211ENST00000463372 MRPL45Q9BRJ2 306 aaKnown RBP13.9□□□□□ -0.18
C9orf3-211ENST00000463372 RAB34Q9BZG1 259 aa13.9□□□□□ -0.18
C9orf3-211ENST00000463372 DPEP3Q9H4B8 488 aa13.9□□□□□ -0.18
C9orf3-211ENST00000463372 OSER1Q9NX31 292 aa13.9□□□□□ -0.18
C9orf3-211ENST00000463372 KCND2Q9NZV8 630 aa13.9□□□□□ -0.18
C9orf3-211ENST00000463372 SIX4Q9UIU6 781 aa13.9□□□□□ -0.18
C9orf3-211ENST00000463372 AGO1Q9UL18 857 aaKnown RBP13.9□□□□□ -0.18
C9orf3-211ENST00000463372 PPM1HQ9ULR3 514 aa13.9□□□□□ -0.18
C9orf3-211ENST00000463372 TISP43B9A030 160 aa13.89□□□□□ -0.19
C9orf3-211ENST00000463372 MKRN2OSH3BPM6 223 aa13.89□□□□□ -0.19
C9orf3-211ENST00000463372 TPP1O14773 563 aa13.89□□□□□ -0.19
C9orf3-211ENST00000463372 AQP9O43315 295 aa13.89□□□□□ -0.19
C9orf3-211ENST00000463372 HMBSP08397 361 aa13.89□□□□□ -0.19
C9orf3-211ENST00000463372 HOXD9P28356 352 aaPredicted RBP13.89□□□□□ -0.19
C9orf3-211ENST00000463372 ABCD1P33897 745 aa13.89□□□□□ -0.19
C9orf3-211ENST00000463372 ETV5P41161 510 aa13.89□□□□□ -0.19
C9orf3-211ENST00000463372 DEFB109BQ30KR1 87 aa13.89□□□□□ -0.19
C9orf3-211ENST00000463372 KRT79Q5XKE5 535 aa13.89□□□□□ -0.19
C9orf3-211ENST00000463372 TCTN3Q6NUS6 607 aa13.89□□□□□ -0.19
C9orf3-211ENST00000463372 ZC3H3Q8IXZ2 948 aaKnown RBP13.89□□□□□ -0.19
C9orf3-211ENST00000463372 TMEM145Q8NBT3 493 aa13.89□□□□□ -0.19
C9orf3-211ENST00000463372 B3GALNT2Q8NCR0 500 aa13.89□□□□□ -0.19
C9orf3-211ENST00000463372 PTPRN2Q92932 1015 aa13.89□□□□□ -0.19
C9orf3-211ENST00000463372 SMARCD1Q96GM5 515 aa13.89□□□□□ -0.19
C9orf3-211ENST00000463372 CMKLR1Q99788 373 aa13.89□□□□□ -0.19
C9orf3-211ENST00000463372 MTMR12Q9C0I1 747 aa13.89□□□□□ -0.19
C9orf3-211ENST00000463372 A8MXQ7 604 aa13.88□□□□□ -0.19
C9orf3-211ENST00000463372 SLC31A1O15431 190 aa13.88□□□□□ -0.19
C9orf3-211ENST00000463372 NKX2-8O15522 239 aa13.88□□□□□ -0.19
C9orf3-211ENST00000463372 IL1BP01584 269 aa13.88□□□□□ -0.19
C9orf3-211ENST00000463372 C4BPAP04003 597 aaKnown RBP13.88□□□□□ -0.19
C9orf3-211ENST00000463372 PSMA5P28066 241 aa13.88□□□□□ -0.19
C9orf3-211ENST00000463372 WNT7BP56706 349 aa13.88□□□□□ -0.19
C9orf3-211ENST00000463372 MRPL49Q13405 166 aaKnown RBP13.88□□□□□ -0.19
C9orf3-211ENST00000463372 TOB2Q14106 344 aaPredicted RBP13.88□□□□□ -0.19
C9orf3-211ENST00000463372 ZNF174Q15697 407 aa13.88□□□□□ -0.19
C9orf3-211ENST00000463372 KMT5BQ4FZB7 885 aa13.88□□□□□ -0.19
C9orf3-211ENST00000463372 C9orf64Q5T6V5 341 aa13.88□□□□□ -0.19
C9orf3-211ENST00000463372 SPNS3Q6ZMD2 512 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms