RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 ERVW-1Q9UQF0 538 aa13.65□□□□□ -0.22
C9orf3-210ENST00000462125 TNRC6BQ9UPQ9 1833 aaKnown RBP13.64□□□□□ -0.23
C9orf3-210ENST00000462125 CACNA1GO43497 2377 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 SYNJ2BP-COX16A0A087WUM0 186 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 A0A1B0GVM2 712 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 TARSL2A2RTX5 802 aaKnown RBP13.64□□□□□ -0.23
C9orf3-210ENST00000462125 TCAF2A6NFQ2 919 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 LGALS16A8MUM7 142 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 PAGE1O75459 146 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 GFPT2O94808 682 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 MOCS3O95396 460 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 CHRNB2P17787 502 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 ENGP17813 658 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 VASPP50552 380 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-210ENST00000462125 OXCT1P55809 520 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 ST8SIA6P61647 398 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 RPS14P62263 151 aaKnown RBP13.64□□□□□ -0.23
C9orf3-210ENST00000462125 ECT2LQ008S8 904 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 CDR2Q01850 454 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 NME3Q13232 169 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 HNRNPA1L2Q32P51 320 aaKnown RBP13.64□□□□□ -0.23
C9orf3-210ENST00000462125 PLEKHG6Q3KR16 790 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 SLC25A52Q3SY17 297 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 WDR45BQ5MNZ6 344 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 BRMS1LQ5PSV4 323 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 RABGAP1LQ5R372 815 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 BNIPLQ7Z465 357 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 APCDD1Q8J025 514 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 ANKRD20A12PQ8NF67 263 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 IGSF8Q969P0 613 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 ALG14Q96F25 216 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 C1orf74Q96LT6 269 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 ERGIC2Q96RQ1 377 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 GPR174Q9BXC1 333 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 PCED1AQ9H1Q7 454 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 RSPH9Q9H1X1 276 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-210ENST00000462125 WDCPQ9H6R7 721 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 FAM207AQ9NSI2 230 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-210ENST00000462125 PIGVQ9NUD9 493 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 COX16Q9P0S2 106 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 TMEM63CQ9P1W3 806 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 STAP1Q9ULZ2 295 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 HS3ST4Q9Y661 456 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 ITIH6Q6UXX5 1313 aa13.64□□□□□ -0.23
C9orf3-210ENST00000462125 CFAP47Q6ZTR5 3102 aa13.63□□□□□ -0.23
C9orf3-210ENST00000462125 I6L893 689 aaPredicted RBP13.63□□□□□ -0.23
C9orf3-210ENST00000462125 ENDOD1O94919 500 aa13.63□□□□□ -0.23
C9orf3-210ENST00000462125 KCNK5O95279 499 aa13.63□□□□□ -0.23
C9orf3-210ENST00000462125 ADCY5O95622 1261 aa13.63□□□□□ -0.23
C9orf3-210ENST00000462125 TFE3P19532 575 aaPredicted RBP13.63□□□□□ -0.23
C9orf3-210ENST00000462125 MMP8P22894 467 aa13.63□□□□□ -0.23
C9orf3-210ENST00000462125 STAT1P42224 750 aa13.63□□□□□ -0.23
C9orf3-210ENST00000462125 CTSOP43234 321 aaPredicted RBP13.63□□□□□ -0.23
C9orf3-210ENST00000462125 RNASE9P60153 205 aaKnown RBP13.63□□□□□ -0.23
C9orf3-210ENST00000462125 FMO1Q01740 532 aa13.63□□□□□ -0.23
C9orf3-210ENST00000462125 SYCP1Q15431 976 aa13.63□□□□□ -0.23
C9orf3-210ENST00000462125 ZSCAN23Q3MJ62 389 aa13.63□□□□□ -0.23
C9orf3-210ENST00000462125 C9orf64Q5T6V5 341 aa13.63□□□□□ -0.23
C9orf3-210ENST00000462125 ACBD5Q5T8D3 534 aaPredicted RBP13.63□□□□□ -0.23
C9orf3-210ENST00000462125 CXorf57Q6NSI4 855 aaKnown RBP13.63□□□□□ -0.23
C9orf3-210ENST00000462125 MSANTD4Q8NCY6 345 aa13.63□□□□□ -0.23
C9orf3-210ENST00000462125 CPA5Q8WXQ8 436 aa13.63□□□□□ -0.23
C9orf3-210ENST00000462125 PPP1R9BQ96SB3 815 aa13.63□□□□□ -0.23
C9orf3-210ENST00000462125 TKTL2Q9H0I9 626 aa13.63□□□□□ -0.23
C9orf3-210ENST00000462125 MTG2Q9H4K7 406 aa13.63□□□□□ -0.23
C9orf3-210ENST00000462125 NLRC4Q9NPP4 1024 aa13.63□□□□□ -0.23
C9orf3-210ENST00000462125 ANLNQ9NQW6 1124 aa13.63□□□□□ -0.23
C9orf3-210ENST00000462125 SUSD2Q9UGT4 822 aa13.63□□□□□ -0.23
C9orf3-210ENST00000462125 SLCO3A1Q9UIG8 710 aa13.63□□□□□ -0.23
C9orf3-210ENST00000462125 SCML1Q9UN30 329 aa13.63□□□□□ -0.23
C9orf3-210ENST00000462125 TBC1D30Q9Y2I9 924 aa13.63□□□□□ -0.23
C9orf3-210ENST00000462125 ATXN2Q99700 1313 aaKnown RBP13.63□□□□□ -0.23
C9orf3-210ENST00000462125 DRGXA6NNA5 263 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 ARHGAP33O14559 1287 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 DNTTP04053 509 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 CFIP05156 583 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 UNGP13051 313 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-210ENST00000462125 GNSP15586 552 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 CDK11BP21127 795 aaKnown RBP13.62□□□□□ -0.23
C9orf3-210ENST00000462125 CSRP1P21291 193 aaKnown RBP13.62□□□□□ -0.23
C9orf3-210ENST00000462125 MAOBP27338 520 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 MZF1P28698 734 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-210ENST00000462125 ACSL1P33121 698 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 FLT3P36888 993 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 UBXN1Q04323 297 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 DEUP1Q05D60 604 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 GFPT1Q06210 699 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-210ENST00000462125 TYRO3Q06418 890 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 SULT2A1Q06520 285 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 C2CD6Q53TS8 623 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 ARTNQ5T4W7 220 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 FAM102AQ5T9C2 384 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-210ENST00000462125 NAA35Q5VZE5 725 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 TRNP1Q6NT89 227 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 TRIM72Q6ZMU5 477 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 C14orf80Q86SX3 495 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 ZNF683Q8IZ20 524 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 RGL4Q8IZJ4 473 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 C1orf216Q8TAB5 229 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 SLC20A1Q8WUM9 679 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms