RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 SUMO4Q6EEV6 95 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 TTLL5Q6EMB2 1281 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 LAIR1Q6GTX8 287 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 ACAD10Q6JQN1 1059 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 MZT2BQ6NZ67 158 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 FAM180BQ6P0A1 224 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 SYNE3Q6ZMZ3 975 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 DCDC5Q6ZRR9 648 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 BCDIN3DQ7Z5W3 292 aaKnown RBP3.35□□□□□ -1.87
HDAC6-212ENST00000461608 GALNT4Q8N4A0 578 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 ZNF366Q8N895 744 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 BEND2Q8NDZ0 799 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 TNIP2Q8NFZ5 429 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 RFWD2Q8NHY2 731 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 ADAMTS18Q8TE60 1221 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 HVCN1Q96D96 273 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 ZBTB10Q96DT7 871 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 P2RY11Q96G91 374 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 CCDC17Q96LX7 622 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 TREX2Q9BQ50 279 aaPredicted RBP3.35□□□□□ -1.87
HDAC6-212ENST00000461608 ELOVL1Q9BW60 279 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 TAOK3Q9H2K8 898 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 STN1Q9H668 368 aaKnown RBP3.35□□□□□ -1.87
HDAC6-212ENST00000461608 RIOX1Q9H6W3 641 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 SLC22A11Q9NSA0 550 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 SMC4Q9NTJ3 1288 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 OLA1Q9NTK5 396 aaKnown RBP3.35□□□□□ -1.87
HDAC6-212ENST00000461608 BEX4Q9NWD9 120 aaPredicted RBP3.35□□□□□ -1.87
HDAC6-212ENST00000461608 ALKBH4Q9NXW9 302 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 HCN3Q9P1Z3 774 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 SLC25A13Q9UJS0 675 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 FBXO9Q9UK97 447 aaPredicted RBP3.35□□□□□ -1.87
HDAC6-212ENST00000461608 PACSIN3Q9UKS6 424 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 LAS1LQ9Y4W2 734 aaKnown RBP3.35□□□□□ -1.87
HDAC6-212ENST00000461608 SH2D7A6NKC9 451 aaPredicted RBP3.34□□□□□ -1.87
HDAC6-212ENST00000461608 TMEM232C9JQI7 657 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 FYB1O15117 783 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 RNF8O76064 485 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 RTN3O95197 1032 aaPredicted RBP3.34□□□□□ -1.87
HDAC6-212ENST00000461608 SCGB1D1O95968 90 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 CD4P01730 458 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 ENO1P06733 434 aaKnown RBP3.34□□□□□ -1.87
HDAC6-212ENST00000461608 CYP4B1P13584 511 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 CAPN3P20807 821 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 FBLP22087 321 aaKnown RBP3.34□□□□□ -1.87
HDAC6-212ENST00000461608 PRKCHP24723 683 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 GSTM2P28161 218 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 CD38P28907 300 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 STAT1P42224 750 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 RARRES1P49788 294 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 COPB1P53618 953 aaKnown RBP3.34□□□□□ -1.87
HDAC6-212ENST00000461608 CACNA2D1P54289 1103 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 RPP30P78346 268 aaKnown RBP3.34□□□□□ -1.87
HDAC6-212ENST00000461608 SIM1P81133 766 aaPredicted RBP3.34□□□□□ -1.87
HDAC6-212ENST00000461608 DMWDQ09019 674 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 FOXI1Q12951 378 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 ZNF362Q5T0B9 420 aaPredicted RBP3.34□□□□□ -1.87
HDAC6-212ENST00000461608 AADACL2Q6P093 401 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 INO80CQ6PI98 192 aaPredicted RBP3.34□□□□□ -1.87
HDAC6-212ENST00000461608 SYCE2Q6PIF2 218 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 SERPINA13PQ6UXR4 307 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 UEVLDQ8IX04 471 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 ADGRF3Q8IZF5 1079 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 LSM14AQ8ND56 463 aaKnown RBP3.34□□□□□ -1.87
HDAC6-212ENST00000461608 LINS1Q8NG48 757 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 NFKBIDQ8NI38 313 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 SARAFQ96BY9 339 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 RNF125Q96EQ8 232 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 MASTLQ96GX5 879 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 KAZALD1Q96I82 304 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 TIGD1Q96MW7 591 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 DUSP26Q9BV47 211 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 PAIP1Q9H074 479 aaKnown RBP3.34□□□□□ -1.87
HDAC6-212ENST00000461608 CLPBQ9H078 707 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 NUAK2Q9H093 628 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 INTS2Q9H0H0 1204 aaKnown RBP3.34□□□□□ -1.87
HDAC6-212ENST00000461608 PDCL3Q9H2J4 239 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 ACAD9Q9H845 621 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 VEZTQ9HBM0 779 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 ARL8BQ9NVJ2 186 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 THAP1Q9NVV9 213 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 MAP3K20Q9NYL2 800 aaKnown RBP3.34□□□□□ -1.87
HDAC6-212ENST00000461608 VPS4AQ9UN37 437 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 CYP46A1Q9Y6A2 500 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 WNT6Q9Y6F9 365 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 EMSYQ7Z589 1322 aa3.34□□□□□ -1.87
HDAC6-212ENST00000461608 TDRD9Q8NDG6 1382 aaKnown RBP3.34□□□□□ -1.88
HDAC6-212ENST00000461608 COL4A3Q01955 1670 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.33□□□□□ -1.88
HDAC6-212ENST00000461608 NPIPB13A6NJU9 1138 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 NPIPB5A8MRT5 1133 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 NPIPB4C9JG80 1138 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 MCIDASD6RGH6 385 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 CLIC1O00299 241 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 PRYO14603 147 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 EXOC3O60645 756 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 CNTN5O94779 1100 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 CCNDBP1O95273 360 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 TBX18O95935 607 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 F9P00740 461 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms