RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 FBXL22Q6P050 247 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 MON1BQ7L1V2 547 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 ADIPOR2Q86V24 386 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 VPS36Q86VN1 386 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 EMC1Q8N766 993 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 CPLX3Q8WVH0 158 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 SORCS1Q8WY21 1168 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 SYN2Q92777 582 aaPredicted RBP15.42■□□□□ 0.06
ATG4B-213ENST00000460211 C1orf74Q96LT6 269 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 HAPLN3Q96S86 360 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 TTYH3Q9C0H2 523 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 VANGL2Q9ULK5 521 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 LUC7L2Q9Y383 392 aaKnown RBP15.42■□□□□ 0.06
ATG4B-213ENST00000460211 KIAA1549LQ6ZVL6 1849 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 EML5Q05BV3 1969 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 C2CD4BA6NLJ0 364 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 WASH3PC4AMC7 463 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 MAP3K13O43283 966 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 ZNF217O75362 1048 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 CLDN11O75508 207 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 ENDOD1O94919 500 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 EPN2O95208 641 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 ADCY5O95622 1261 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 EPHX1P07099 455 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 ZNF806P0C7X5 589 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 GZMAP12544 262 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 PMLP29590 882 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 IL12RB1P42701 662 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 PTPN9P43378 593 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 ENPP2Q13822 863 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 CCDC14Q49A88 953 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 STPG1Q5TH74 334 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 OTUD1Q5VV17 481 aaPredicted RBP15.41■□□□□ 0.06
ATG4B-213ENST00000460211 DCUN1D2Q6PH85 259 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 STRADAQ7RTN6 431 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 MCOLN2Q8IZK6 566 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 CCAR2Q8N163 923 aaKnown RBP15.41■□□□□ 0.06
ATG4B-213ENST00000460211 WFDC5Q8TCV5 224 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 CYB5D2Q8WUJ1 264 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 TTC17Q96AE7 1141 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 MYEOVQ96EZ4 313 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 ZC3H10Q96K80 434 aaKnown RBP15.41■□□□□ 0.06
ATG4B-213ENST00000460211 CALCOCO1Q9P1Z2 691 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 SUN2Q9UH99 717 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 CAPN11Q9UMQ6 739 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 RAD54BQ9Y620 910 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 FRYQ5TBA9 3013 aa15.41■□□□□ 0.06
ATG4B-213ENST00000460211 TMCO5BA8MYB1 307 aa15.4■□□□□ 0.06
ATG4B-213ENST00000460211 TM4SF5O14894 197 aa15.4■□□□□ 0.06
ATG4B-213ENST00000460211 GABRG2P18507 467 aa15.4■□□□□ 0.06
ATG4B-213ENST00000460211 GPD1P21695 349 aa15.4■□□□□ 0.06
ATG4B-213ENST00000460211 RFC1P35251 1148 aaPredicted RBP15.4■□□□□ 0.06
ATG4B-213ENST00000460211 NNMTP40261 264 aa15.4■□□□□ 0.06
ATG4B-213ENST00000460211 CSKP41240 450 aa15.4■□□□□ 0.06
ATG4B-213ENST00000460211 LIMK1P53667 647 aa15.4■□□□□ 0.06
ATG4B-213ENST00000460211 SULT2A1Q06520 285 aa15.4■□□□□ 0.06
ATG4B-213ENST00000460211 CDO1Q16878 200 aa15.4■□□□□ 0.06
ATG4B-213ENST00000460211 PLK5Q496M5 336 aa15.4■□□□□ 0.06
ATG4B-213ENST00000460211 TDRD12Q587J7 1177 aaKnown RBP15.4■□□□□ 0.06
ATG4B-213ENST00000460211 PITRM1Q5JRX3 1037 aa15.4■□□□□ 0.06
ATG4B-213ENST00000460211 RNF219Q5W0B1 726 aaPredicted RBP15.4■□□□□ 0.06
ATG4B-213ENST00000460211 TRNP1Q6NT89 227 aa15.4■□□□□ 0.06
ATG4B-213ENST00000460211 KIAA1211LQ6NV74 962 aa15.4■□□□□ 0.06
ATG4B-213ENST00000460211 ZNF571Q7Z3V5 609 aaPredicted RBP15.4■□□□□ 0.06
ATG4B-213ENST00000460211 FAM131BQ86XD5 332 aa15.4■□□□□ 0.06
ATG4B-213ENST00000460211 RNF214Q8ND24 703 aa15.4■□□□□ 0.06
ATG4B-213ENST00000460211 JOSD2Q8TAC2 188 aa15.4■□□□□ 0.06
ATG4B-213ENST00000460211 OLIG1Q8TAK6 271 aa15.4■□□□□ 0.06
ATG4B-213ENST00000460211 IGSF8Q969P0 613 aa15.4■□□□□ 0.06
ATG4B-213ENST00000460211 SYT11Q9BT88 431 aa15.4■□□□□ 0.06
ATG4B-213ENST00000460211 XPO4Q9C0E2 1151 aaKnown RBP15.4■□□□□ 0.06
ATG4B-213ENST00000460211 PARVAQ9NVD7 372 aa15.4■□□□□ 0.06
ATG4B-213ENST00000460211 INVSQ9Y283 1065 aa15.4■□□□□ 0.06
ATG4B-213ENST00000460211 ITIH6Q6UXX5 1313 aa15.4■□□□□ 0.06
ATG4B-213ENST00000460211 LAMA1P25391 3075 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 DCLK1O15075 740 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 FTLP02792 175 aaPredicted RBP15.39■□□□□ 0.05
ATG4B-213ENST00000460211 SERPING1P05155 500 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 SRPRAP08240 638 aaKnown RBP15.39■□□□□ 0.05
ATG4B-213ENST00000460211 TPM1P09493 284 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 SKILP12757 684 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 RRM1P23921 792 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 P2RY2P41231 377 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 CDH4P55283 916 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 TRIM14Q14142 442 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 C15orf59Q2T9L4 293 aaPredicted RBP15.39■□□□□ 0.05
ATG4B-213ENST00000460211 PLEKHG6Q3KR16 790 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 FUT11Q495W5 492 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 C5orf22Q49AR2 442 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 FSCBQ5H9T9 825 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 TCEAL6Q6IPX3 200 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 WDR59Q6PJI9 974 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 KIAA1324Q6UXG2 1013 aaKnown RBP15.39■□□□□ 0.05
ATG4B-213ENST00000460211 SLC36A4Q6YBV0 504 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 LPCAT2Q7L5N7 544 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 BNIPLQ7Z465 357 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 CIR1Q86X95 450 aaPredicted RBP15.39■□□□□ 0.05
ATG4B-213ENST00000460211 KDM1BQ8NB78 822 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 FAM172AQ8WUF8 416 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 RLN3Q8WXF3 142 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms