RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 ISL2Q96A47 359 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 PBXIP1Q96AQ6 731 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 FAM149B1Q96BN6 582 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 ZNF669Q96BR6 464 aaPredicted RBP3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 CCDC124Q96CT7 223 aaKnown RBP3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 CPB2Q96IY4 423 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 MAML3Q96JK9 1138 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 CLPTM1LQ96KA5 538 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 AGAP3Q96P47 875 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 CSPG4P5Q96PW8 444 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 VAT1Q99536 393 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 RBBP8Q99708 897 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 EPAS1Q99814 870 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 GORASP1Q9BQQ3 440 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 FDXACB1Q9BRP7 624 aaPredicted RBP3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 TRIM56Q9BRZ2 755 aaKnown RBP3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 MED10Q9BTT4 135 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 EFHD1Q9BUP0 239 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 TRIM62Q9BVG3 475 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 SPATA16Q9BXB7 569 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 TRIM15Q9C019 465 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 IL22Q9GZX6 179 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 EPB41L1Q9H4G0 881 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 EBF3Q9H4W6 596 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 MROH8Q9H579 483 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 EFCAB1Q9HAE3 211 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 NMRAL1Q9HBL8 299 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 LRRC4Q9HBW1 653 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 EML4Q9HC35 981 aaKnown RBP3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 VTA1Q9NP79 307 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 TCF7L2Q9NQB0 619 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 SMYD2Q9NRG4 433 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 SNX15Q9NRS6 342 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 FAM49BQ9NUQ9 324 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 SYBUQ9NX95 663 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 DTLQ9NZJ0 730 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 BTBD7Q9P203 1132 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 COPG2Q9UBF2 871 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 HMGXB4Q9UGU5 601 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 VANGL2Q9ULK5 521 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 PPM1HQ9ULR3 514 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 FZD10Q9ULW2 581 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 RAB26Q9ULW5 256 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 PSMD13Q9UNM6 376 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 RAP2CQ9Y3L5 183 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 TELO2Q9Y4R8 837 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 RPS6KL1Q9Y6S9 549 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 LRRC37A2A6NM11 1700 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 WDR90Q96KV7 1748 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 RALGAPA2Q2PPJ7 1873 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 LTBP3Q9NS15 1303 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 CITO14578 2027 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 SYNJ2BP-COX16A0A087WUM0 186 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 A0A087X1B8 175 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 A0A096LPK6 155 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 EME2A4GXA9 379 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 RGSL1A5PLK6 1076 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 KLHL33A6NCF5 533 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 RRN3P2A6NIE6 340 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZBTB42B2RXF5 422 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 E9PBE3 544 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 TRIM38O00635 465 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 CYB561D2O14569 222 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 CXCL11O14625 94 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 AIM2O14862 343 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 PAPSS1O43252 624 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 DCXO43602 365 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 BUD23O43709 281 aaKnown RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 AP1G1O43747 822 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 ATP9BO43861 1147 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 MFSD11O43934 449 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 NPHS1O60500 1241 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 TSPAN1O60635 241 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 UGT1A9O60656 530 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 KLHL41O60662 606 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 TADA2AO75478 443 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 CABYRO75952 493 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 ANXA9O76027 345 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 SRP72O76094 671 aaKnown RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 DDHD2O94830 711 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 MAP3K6O95382 1288 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 AP2A1O95782 977 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 CLPTM1O96005 669 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 F9P00740 461 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 C1QAP02745 245 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 ALDOAP04075 364 aaKnown RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 MYCNP04198 464 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 LGALS2P05162 132 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 PFKMP08237 780 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 FAM163BP0C2L3 166 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 FAM58BPP0C7Q3 252 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 PABPC4LP0CB38 370 aaKnown RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 HSPA8P11142 646 aaKnown RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 PIM1P11309 404 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 INSRRP14616 1297 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 VAV1P15498 845 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 GOT1P17174 413 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 ARF4P18085 180 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 VCLP18206 1134 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 CYP3A5P20815 502 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms