RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 ITGA2BP08514 1039 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 CTGFP29279 349 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 CYP2C18P33260 490 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 GARSP41250 739 aaKnown RBP15.44■□□□□ 0.06
LDLR-202ENST00000455727 ZBTB16Q05516 673 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 MFSD14CQ5VZR4 134 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 BSPRYQ5W0U4 402 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 ITPRIPL1Q6GPH6 555 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 RGMBQ6NW40 437 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 TMEM135Q86UB9 458 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 TBC1D31Q96DN5 1066 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 CERS2Q96G23 380 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 PKMYT1Q99640 499 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 CPNE1Q99829 537 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 TKTL2Q9H0I9 626 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 OSBPL2Q9H1P3 480 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 BFARQ9NZS9 450 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 ZFATQ9P243 1243 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 PADI3Q9ULW8 664 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 RPS6KL1Q9Y6S9 549 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 PATJQ8NI35 1801 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 SHROOM3Q8TF72 1996 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 MAGEB16A2A368 324 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 GSRP00390 522 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 PGK1P00558 417 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 GP5P40197 560 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 DSC3Q14574 896 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 E2F5Q15329 346 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 GRTP1Q5TC63 336 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 CES4AQ5XG92 561 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 LONP2Q86WA8 852 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 CRLF3Q8IUI8 442 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 OR52K1Q8NGK4 314 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 YY1AP1Q9H869 796 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 DMAP1Q9NPF5 467 aaPredicted RBP15.44■□□□□ 0.06
LDLR-202ENST00000455727 THAP1Q9NVV9 213 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 PIH1D1Q9NWS0 290 aaKnown RBP15.44■□□□□ 0.06
LDLR-202ENST00000455727 FAM237BA0A1B0GVD1 139 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 AP3B1O00203 1094 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 TPP1O14773 563 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 ZBTB24O43167 697 aaPredicted RBP15.43■□□□□ 0.06
LDLR-202ENST00000455727 B3GAT3O94766 335 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 USP1O94782 785 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 CALB2P22676 271 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 STX3Q13277 289 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 CRHR2Q13324 411 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 EIF4EBP2Q13542 120 aaPredicted RBP15.43■□□□□ 0.06
LDLR-202ENST00000455727 PDE1CQ14123 709 aaPredicted RBP15.43■□□□□ 0.06
LDLR-202ENST00000455727 MAPRE1Q15691 268 aaKnown RBP15.43■□□□□ 0.06
LDLR-202ENST00000455727 CD300LGQ6UXG3 332 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 SH3TC2Q8TF17 1288 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 EDEM1Q92611 657 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 DPF3Q92784 378 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 UROC1Q96N76 676 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 SIKE1Q9BRV8 207 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 TXNDC16Q9P2K2 825 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 ADAM28Q9UKQ2 775 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 VANGL2Q9ULK5 521 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 NLRC5Q86WI3 1866 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 LRIG2O94898 1065 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 IGLV3-25P01717 112 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 BDNFP23560 247 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 EPHB2P29323 1055 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 CD68P34810 354 aaPredicted RBP15.43■□□□□ 0.06
LDLR-202ENST00000455727 NPY2RP49146 381 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 GRIK3Q13003 919 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 WASHC2DQ5SRD0 308 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 PAXIP1Q6ZW49 1069 aaPredicted RBP15.43■□□□□ 0.06
LDLR-202ENST00000455727 FAM13CQ8NE31 585 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 ISL2Q96A47 359 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 BTBD10Q9BSF8 475 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 FBXO6Q9NRD1 293 aaPredicted RBP15.43■□□□□ 0.06
LDLR-202ENST00000455727 ARL8BQ9NVJ2 186 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 NOP53Q9NZM5 478 aaKnown RBP15.43■□□□□ 0.06
LDLR-202ENST00000455727 EMCNQ9ULC0 261 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 PSAT1Q9Y617 370 aa15.43■□□□□ 0.06
LDLR-202ENST00000455727 ARHGEF37A1IGU5 675 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 SEPT4O43236 478 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 MGEA5O60502 916 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 PLIN3O60664 434 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 SLC10A3P09131 477 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 SKIP12755 728 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 DNAJB2P25686 324 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 CD52P31358 61 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 PDE1BQ01064 536 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 TUSC3Q13454 348 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 FASTKD1Q53R41 847 aaKnown RBP15.42■□□□□ 0.06
LDLR-202ENST00000455727 CTU1Q7Z7A3 348 aaKnown RBP15.42■□□□□ 0.06
LDLR-202ENST00000455727 SAPCD2Q86UD0 394 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 TAC4Q86UU9 113 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 RASSF3Q86WH2 238 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 KLHDC8BQ8IXV7 354 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.42■□□□□ 0.06
LDLR-202ENST00000455727 ZSCAN18Q8TBC5 510 aaPredicted RBP15.42■□□□□ 0.06
LDLR-202ENST00000455727 TEKT5Q96M29 485 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 FCRL3Q96P31 734 aaPredicted RBP15.42■□□□□ 0.06
LDLR-202ENST00000455727 RHOBTB2Q9BYZ6 727 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 WWP1Q9H0M0 922 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 SLC17A6Q9P2U8 582 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms