RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 FAM72BQ86X60 149 aa14.72□□□□□ -0.05
HMGXB4-204ENST00000455359 KATNAL2Q8IYT4 538 aa14.72□□□□□ -0.05
HMGXB4-204ENST00000455359 ZNF687Q8N1G0 1237 aa14.72□□□□□ -0.05
HMGXB4-204ENST00000455359 CFAP52Q8N1V2 620 aa14.72□□□□□ -0.05
HMGXB4-204ENST00000455359 PYROXD2Q8N2H3 581 aa14.72□□□□□ -0.05
HMGXB4-204ENST00000455359 CARNMT1Q8N4J0 409 aa14.72□□□□□ -0.05
HMGXB4-204ENST00000455359 RTL3Q8N8U3 475 aaKnown RBP14.72□□□□□ -0.05
HMGXB4-204ENST00000455359 TERB1Q8NA31 727 aa14.72□□□□□ -0.05
HMGXB4-204ENST00000455359 KCTD6Q8NC69 237 aa14.72□□□□□ -0.05
HMGXB4-204ENST00000455359 TRIM58Q8NG06 486 aa14.72□□□□□ -0.05
HMGXB4-204ENST00000455359 HSPH1Q92598 858 aa14.72□□□□□ -0.05
HMGXB4-204ENST00000455359 BHMTQ93088 406 aa14.72□□□□□ -0.05
HMGXB4-204ENST00000455359 ZNF670Q9BS34 389 aa14.72□□□□□ -0.05
HMGXB4-204ENST00000455359 TBC1D17Q9HA65 648 aa14.72□□□□□ -0.05
HMGXB4-204ENST00000455359 PCDH18Q9HCL0 1135 aa14.72□□□□□ -0.05
HMGXB4-204ENST00000455359 LTB4R2Q9NPC1 389 aa14.72□□□□□ -0.05
HMGXB4-204ENST00000455359 TMEM248Q9NWD8 314 aa14.72□□□□□ -0.05
HMGXB4-204ENST00000455359 GPATCH2LQ9NWQ4 482 aa14.72□□□□□ -0.05
HMGXB4-204ENST00000455359 ZNF212Q9UDV6 495 aa14.72□□□□□ -0.05
HMGXB4-204ENST00000455359 TRIM10Q9UDY6 481 aa14.72□□□□□ -0.05
HMGXB4-204ENST00000455359 KIF26AQ9ULI4 1882 aaPredicted RBP14.72□□□□□ -0.05
HMGXB4-204ENST00000455359 NEU3Q9UQ49 428 aa14.72□□□□□ -0.05
HMGXB4-204ENST00000455359 A0A0U1RQJ8 604 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 ILVBLA1L0T0 632 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 TBC1D3BA6NDS4 549 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 TMEM221A6NGB7 291 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 M0R296 226 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 NPC1O15118 1278 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 DAPK3O43293 454 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 CREB3O43889 395 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 CNTN5O94779 1100 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 MOCS3O95396 460 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 PABPC1P11940 636 aaKnown RBP14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 CTNNA2P26232 953 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 HLA-FP30511 346 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 OR1E1P30953 314 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 CTNNA1P35221 906 aaKnown RBP14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 GGCXP38435 758 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 MAGEA9P43362 315 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 CDH6P55285 790 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 DPYSQ14117 519 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 PON2Q15165 354 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 SMTNL2Q2TAL5 461 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 ALFQ53S48 1182 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 ODF2Q5BJF6 829 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 PPP6R3Q5H9R7 873 aaPredicted RBP14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 TXNRD3NBQ6F5E7 133 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 PEX26Q7Z412 305 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 NT5DC3Q86UY8 548 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 C12orf40Q86WS4 652 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 AHI1Q8N157 1196 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 LZTR1Q8N653 840 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 NAT16Q8N8M0 369 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 ATRIPQ8WXE1 791 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 TSC1Q92574 1164 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 LMLNQ96KR4 655 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 CSPG4P5Q96PW8 444 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 IER2Q9BTL4 223 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 MFSD1Q9H3U5 465 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 KCND1Q9NSA2 647 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 CWC15Q9P013 229 aaKnown RBP14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 GGA2Q9UJY4 613 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 AMFRQ9UKV5 643 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 STARD13Q9Y3M8 1113 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 PCDHA3Q9Y5H8 950 aa14.71□□□□□ -0.05
HMGXB4-204ENST00000455359 FAM170BA6NMN3 283 aa14.7□□□□□ -0.06
HMGXB4-204ENST00000455359 KDELR1P24390 212 aa14.7□□□□□ -0.06
HMGXB4-204ENST00000455359 MSNP26038 577 aaKnown RBP14.7□□□□□ -0.06
HMGXB4-204ENST00000455359 YBEYP58557 167 aaPredicted RBP14.7□□□□□ -0.06
HMGXB4-204ENST00000455359 SULT2A1Q06520 285 aa14.7□□□□□ -0.06
HMGXB4-204ENST00000455359 CCINQ13939 588 aa14.7□□□□□ -0.06
HMGXB4-204ENST00000455359 HSF5Q4G112 596 aaPredicted RBP14.7□□□□□ -0.06
HMGXB4-204ENST00000455359 FSTL4Q6MZW2 842 aa14.7□□□□□ -0.06
HMGXB4-204ENST00000455359 CXorf57Q6NSI4 855 aaKnown RBP14.7□□□□□ -0.06
HMGXB4-204ENST00000455359 CPNE8Q86YQ8 564 aa14.7□□□□□ -0.06
HMGXB4-204ENST00000455359 RCOR2Q8IZ40 523 aa14.7□□□□□ -0.06
HMGXB4-204ENST00000455359 UMODL1-AS1Q8N2C9 162 aa14.7□□□□□ -0.06
HMGXB4-204ENST00000455359 UBL4BQ8N7F7 174 aa14.7□□□□□ -0.06
HMGXB4-204ENST00000455359 EXD1Q8NHP7 514 aa14.7□□□□□ -0.06
HMGXB4-204ENST00000455359 UCMAQ8WVF2 138 aa14.7□□□□□ -0.06
HMGXB4-204ENST00000455359 CLDN23Q96B33 292 aa14.7□□□□□ -0.06
HMGXB4-204ENST00000455359 FAF2Q96CS3 445 aa14.7□□□□□ -0.06
HMGXB4-204ENST00000455359 MAGEB5Q9BZ81 275 aa14.7□□□□□ -0.06
HMGXB4-204ENST00000455359 MPP6Q9NZW5 540 aa14.7□□□□□ -0.06
HMGXB4-204ENST00000455359 CLEC4EQ9ULY5 219 aa14.7□□□□□ -0.06
HMGXB4-204ENST00000455359 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.7□□□□□ -0.06
HMGXB4-204ENST00000455359 CAPN6Q9Y6Q1 641 aa14.7□□□□□ -0.06
HMGXB4-204ENST00000455359 LRRD1A4D1F6 860 aa14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 ZRANB2O95218 330 aaKnown RBP eCLIP14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 ATP5BP06576 529 aaKnown RBP14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 CHRNB1P11230 501 aa14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 GOT1P17174 413 aa14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 IL4RP24394 825 aa14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 RPS9P46781 194 aaKnown RBP14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 IRAK1P51617 712 aa14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 CLCN5P51795 746 aa14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 NDST2P52849 883 aa14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 COPS2P61201 443 aa14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 LMAN2Q12907 356 aa14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 DPYSL3Q14195 570 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms