RNA–Protein interactions for RNA: ENST00000455263.6

TP53-206, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-206ENST00000455263 ELK3P41970 407 aa12.65□□□□□ -0.38
TP53-206ENST00000455263 EIF3BP55884 814 aaKnown RBP12.65□□□□□ -0.38
TP53-206ENST00000455263 CRADDP78560 199 aa12.65□□□□□ -0.38
TP53-206ENST00000455263 PRKD1Q15139 912 aaPredicted RBP12.65□□□□□ -0.38
TP53-206ENST00000455263 SMAD1Q15797 465 aaKnown RBP12.65□□□□□ -0.38
TP53-206ENST00000455263 ALFQ53S48 1182 aa12.65□□□□□ -0.38
TP53-206ENST00000455263 RFWD3Q6PCD5 774 aa12.65□□□□□ -0.38
TP53-206ENST00000455263 FAM43BQ6ZT52 329 aaPredicted RBP12.65□□□□□ -0.38
TP53-206ENST00000455263 DNAJB7Q7Z6W7 309 aaPredicted RBP12.65□□□□□ -0.38
TP53-206ENST00000455263 SERPINB12Q96P63 405 aa12.65□□□□□ -0.38
TP53-206ENST00000455263 UBE2OQ9C0C9 1292 aaKnown RBP12.65□□□□□ -0.38
TP53-206ENST00000455263 RABEP2Q9H5N1 569 aa12.65□□□□□ -0.38
TP53-206ENST00000455263 KLHL8Q9P2G9 620 aaPredicted RBP12.65□□□□□ -0.38
TP53-206ENST00000455263 INSL6Q9Y581 213 aa12.65□□□□□ -0.38
TP53-206ENST00000455263 A0A0A0MRY4 1105 aa12.65□□□□□ -0.39
TP53-206ENST00000455263 ZNF840PA6NDX5 716 aa12.65□□□□□ -0.39
TP53-206ENST00000455263 ALOX15BO15296 676 aa12.65□□□□□ -0.39
TP53-206ENST00000455263 COCHO43405 550 aa12.65□□□□□ -0.39
TP53-206ENST00000455263 USP12O75317 370 aa12.65□□□□□ -0.39
TP53-206ENST00000455263 JCHAINP01591 159 aa12.65□□□□□ -0.39
TP53-206ENST00000455263 LINC00271P0C7V0 271 aa12.65□□□□□ -0.39
TP53-206ENST00000455263 IRF1P10914 325 aa12.65□□□□□ -0.39
TP53-206ENST00000455263 GARSP41250 739 aaKnown RBP12.65□□□□□ -0.39
TP53-206ENST00000455263 ZBTB17Q13105 803 aa12.65□□□□□ -0.39
TP53-206ENST00000455263 PPIGQ13427 754 aaKnown RBP eCLIP12.65□□□□□ -0.396e-7■■□□□ 12.6
TP53-206ENST00000455263 ARTNQ5T4W7 220 aa12.65□□□□□ -0.39
TP53-206ENST00000455263 PDZD4Q76G19 769 aaPredicted RBP12.65□□□□□ -0.39
TP53-206ENST00000455263 IGSF8Q969P0 613 aa12.65□□□□□ -0.39
TP53-206ENST00000455263 SPATA13Q96N96 652 aa12.65□□□□□ -0.39
TP53-206ENST00000455263 OXCT2Q9BYC2 517 aaPredicted RBP12.65□□□□□ -0.39
TP53-206ENST00000455263 SLC4A7Q9Y6M7 1214 aa12.65□□□□□ -0.39
TP53-206ENST00000455263 SPTBN5Q9NRC6 3674 aaKnown RBP12.65□□□□□ -0.39
TP53-206ENST00000455263 PATJQ8NI35 1801 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 GRXCR1A8MXD5 290 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 RGS16O15492 202 aaPredicted RBP12.64□□□□□ -0.39
TP53-206ENST00000455263 ZBTB24O43167 697 aaPredicted RBP12.64□□□□□ -0.39
TP53-206ENST00000455263 ATP5C1P36542 298 aaKnown RBP12.64□□□□□ -0.39
TP53-206ENST00000455263 GPX6P59796 221 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 ERVFC1P60507 584 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 FBXL22Q6P050 247 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 MSANTD2Q6P1R3 559 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 CAND1Q86VP6 1230 aaKnown RBP12.64□□□□□ -0.39
TP53-206ENST00000455263 HOOK3Q86VS8 718 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 ZNF354CQ86Y25 554 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 PALM2Q8IXS6 379 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 TBC1D31Q96DN5 1066 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 SLC39A8Q9C0K1 460 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 TRPC7Q9HCX4 862 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 GREB1Q4ZG55 1949 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 HIDE1A8MVS5 230 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 HACD1B0YJ81 288 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 TGM5O43548 720 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 ZDHHC11BP0C7U3 371 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 ATP2A2P16615 1042 aaKnown RBP12.64□□□□□ -0.39
TP53-206ENST00000455263 NR1D1P20393 614 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 PTPN3P26045 913 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 PSEN1P49768 467 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 RAB33AQ14088 237 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 EFTUD2Q15029 972 aaKnown RBP eCLIP12.64□□□□□ -0.393e-8■■■■■ 33.6
TP53-206ENST00000455263 SPDYCQ5MJ68 293 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 CYP4X1Q8N118 509 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 MPP5Q8N3R9 675 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 MICAL1Q8TDZ2 1067 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 RPRD1AQ96P16 312 aaPredicted RBP12.64□□□□□ -0.39
TP53-206ENST00000455263 SLC22A12Q96S37 553 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 MAD1L1Q9Y6D9 718 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 CLUHO75153 1309 aa12.64□□□□□ -0.39
TP53-206ENST00000455263 CHADO15335 359 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 CSH1P0DML2 217 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 CSH2P0DML3 217 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 SLC2A3P11169 496 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 CREB1P16220 341 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 SERPINB6P35237 376 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 TRIP4Q15650 581 aaPredicted RBP12.63□□□□□ -0.39
TP53-206ENST00000455263 TPGS2Q68CL5 300 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 KDELC2Q7Z4H8 507 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 DENND1CQ8IV53 801 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 HERC6Q8IVU3 1022 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 ARHGAP12Q8IWW6 846 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 MDM1Q8TC05 714 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 WBP2Q969T9 261 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 CFAP36Q96G28 342 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 ZNF419Q96HQ0 510 aaPredicted RBP12.63□□□□□ -0.39
TP53-206ENST00000455263 BTN2A3PQ96KV6 586 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 TCF25Q9BQ70 676 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 APOL2Q9BQE5 337 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 HERC2P3Q9BVR0 1158 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 RASSF4Q9H2L5 321 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 TRPM5Q9NZQ8 1165 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 SLC12A6Q9UHW9 1150 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 DNMT3LQ9UJW3 386 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 LTBP2Q14767 1821 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 EXOC1LA0A1B0GW35 172 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 HMGB1P1B2RPK0 211 aaPredicted RBP12.63□□□□□ -0.39
TP53-206ENST00000455263 STK10O94804 968 aaKnown RBP12.63□□□□□ -0.39
TP53-206ENST00000455263 GJA1P17302 382 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 PPM1AP35813 382 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 SESN2P58004 480 aaPredicted RBP12.63□□□□□ -0.39
TP53-206ENST00000455263 GUCY1A3Q02108 690 aa12.63□□□□□ -0.39
TP53-206ENST00000455263 PPIDQ08752 370 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms