RNA–Protein interactions for RNA: ENST00000452837.6

THUMPD3-206, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-206ENST00000452837 PABPC4LP0CB38 370 aaKnown RBP12.88□□□□□ -0.35
THUMPD3-206ENST00000452837 PIM1P11309 404 aaPredicted RBP12.88□□□□□ -0.35
THUMPD3-206ENST00000452837 GRK2P25098 689 aa12.88□□□□□ -0.35
THUMPD3-206ENST00000452837 MPSTP25325 297 aa12.88□□□□□ -0.35
THUMPD3-206ENST00000452837 PAOXQ6QHF9 649 aa12.88□□□□□ -0.35
THUMPD3-206ENST00000452837 NAT14Q8WUY8 206 aa12.88□□□□□ -0.35
THUMPD3-206ENST00000452837 ATP2A3Q93084 1043 aa12.88□□□□□ -0.35
THUMPD3-206ENST00000452837 NMD3Q96D46 503 aaKnown RBP12.88□□□□□ -0.35
THUMPD3-206ENST00000452837 CERS2Q96G23 380 aa12.88□□□□□ -0.35
THUMPD3-206ENST00000452837 HAPLN3Q96S86 360 aa12.88□□□□□ -0.35
THUMPD3-206ENST00000452837 NDNQ99608 321 aa12.88□□□□□ -0.35
THUMPD3-206ENST00000452837 CENPKQ9BS16 269 aa12.88□□□□□ -0.35
THUMPD3-206ENST00000452837 CDH19Q9H159 772 aa12.88□□□□□ -0.35
THUMPD3-206ENST00000452837 TXNRD2Q9NNW7 524 aa12.88□□□□□ -0.35
THUMPD3-206ENST00000452837 PCDHB12Q9Y5F1 795 aa12.88□□□□□ -0.35
THUMPD3-206ENST00000452837 CASQ2O14958 399 aaPredicted RBP12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 CNMDO75829 334 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 MLNP12872 115 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 PTPN9P43378 593 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 SNAPC2Q13487 334 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 DBN1Q16643 649 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 Q3C1V9 767 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 TMEM198Q66K66 360 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 FSTL4Q6MZW2 842 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 C4orf22Q6V702 233 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 CCNYQ8ND76 341 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 OR6B3Q8NGW1 331 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 PRDM12Q9H4Q4 367 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 SSX2IPQ9Y2D8 614 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 AK5Q9Y6K8 562 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 C15orf38-AP3S2A0A0A6YYH1 394 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 HBP1O60381 514 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 TSPAN1O60635 241 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 HSPA4LO95757 839 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 JUNP05412 331 aaKnown RBP12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 FDFT1P37268 417 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 GP5P40197 560 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 ALDH1A3P47895 512 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 LSAMPQ13449 338 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 LAMB3Q13751 1172 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 VGLL4Q14135 290 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 ANKRD20A4Q4UJ75 823 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 SH3D19Q5HYK7 790 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 OGFRL1Q5TC84 451 aaPredicted RBP12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 OTUD1Q5VV17 481 aaPredicted RBP12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 ARPINQ7Z6K5 226 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 STRA8Q7Z7C7 330 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 PPP1R13LQ8WUF5 828 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 MARK4Q96L34 752 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 GTF2IRD1Q9UHL9 959 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 KIAA1257Q9ULG3 409 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 ARHGAP26Q9UNA1 814 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 CCDC78A2IDD5 438 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 STX16-NPEPL1H3BU86 382 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 TXNP10599 105 aaKnown RBP12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 XRCC1P18887 633 aaPredicted RBP12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 GLDCP23378 1020 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 EPHA3P29320 983 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 DPP6P42658 865 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 NUDT2P50583 147 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 CHN2P52757 468 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 THOP1P52888 689 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 RABGGTBP53611 331 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 MS4A2Q01362 244 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 TNFAIP2Q03169 654 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 FAM187BQ17R55 369 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 SLC26A9Q7LBE3 791 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 TDRD5Q8NAT2 981 aaKnown RBP12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 JADE3Q92613 823 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 ZNF669Q96BR6 464 aaPredicted RBP12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 MFSD3Q96ES6 412 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 DCUN1D1Q96GG9 259 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 APOL2Q9BQE5 337 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 GATA5Q9BWX5 397 aaPredicted RBP12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 SMARCAD1Q9H4L7 1026 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 FZD10Q9ULW2 581 aa12.87□□□□□ -0.35
THUMPD3-206ENST00000452837 ZNF487B1APH4 448 aa12.86□□□□□ -0.35
THUMPD3-206ENST00000452837 CREB3O43889 395 aa12.86□□□□□ -0.35
THUMPD3-206ENST00000452837 ZFXP17010 805 aaPredicted RBP12.86□□□□□ -0.35
THUMPD3-206ENST00000452837 RPS12P25398 132 aaKnown RBP12.86□□□□□ -0.35
THUMPD3-206ENST00000452837 MAGEA12P43365 314 aa12.86□□□□□ -0.35
THUMPD3-206ENST00000452837 PKNOX1P55347 436 aa12.86□□□□□ -0.35
THUMPD3-206ENST00000452837 MRPS22P82650 360 aaKnown RBP12.86□□□□□ -0.35
THUMPD3-206ENST00000452837 INSCQ1MX18 579 aa12.86□□□□□ -0.35
THUMPD3-206ENST00000452837 EML3Q32P44 896 aa12.86□□□□□ -0.35
THUMPD3-206ENST00000452837 HSP90AA5PQ58FG0 334 aa12.86□□□□□ -0.35
THUMPD3-206ENST00000452837 ARMC3Q5W041 872 aa12.86□□□□□ -0.35
THUMPD3-206ENST00000452837 FAM219BQ5XKK7 198 aa12.86□□□□□ -0.35
THUMPD3-206ENST00000452837 FAM43BQ6ZT52 329 aaPredicted RBP12.86□□□□□ -0.35
THUMPD3-206ENST00000452837 SNX32Q86XE0 403 aa12.86□□□□□ -0.35
THUMPD3-206ENST00000452837 LILRA2Q8N149 483 aa12.86□□□□□ -0.35
THUMPD3-206ENST00000452837 METTL25Q8N6Q8 603 aa12.86□□□□□ -0.35
THUMPD3-206ENST00000452837 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.86□□□□□ -0.35
THUMPD3-206ENST00000452837 USP13Q92995 863 aaPredicted RBP12.86□□□□□ -0.35
THUMPD3-206ENST00000452837 DTNAQ9Y4J8 743 aa12.86□□□□□ -0.35
THUMPD3-206ENST00000452837 ZNF638Q14966 1978 aaKnown RBP12.86□□□□□ -0.35
THUMPD3-206ENST00000452837 A0A096LPK6 155 aa12.86□□□□□ -0.35
THUMPD3-206ENST00000452837 FAM72CH0Y354 149 aa12.86□□□□□ -0.35
THUMPD3-206ENST00000452837 DNAJA2O60884 412 aa12.86□□□□□ -0.35
THUMPD3-206ENST00000452837 USP2O75604 605 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms