RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 GJA4P35212 333 aa11.93□□□□□ -0.5
SCN9A-204ENST00000452182 MARCKSL1P49006 195 aa11.93□□□□□ -0.5
SCN9A-204ENST00000452182 TPI1P60174 286 aa11.93□□□□□ -0.5
SCN9A-204ENST00000452182 COPS2P61201 443 aa11.93□□□□□ -0.5
SCN9A-204ENST00000452182 DPYSQ14117 519 aa11.93□□□□□ -0.5
SCN9A-204ENST00000452182 KRT81Q14533 505 aa11.93□□□□□ -0.5
SCN9A-204ENST00000452182 RPS6KA1Q15418 735 aa11.93□□□□□ -0.5
SCN9A-204ENST00000452182 ANO4Q32M45 955 aa11.93□□□□□ -0.5
SCN9A-204ENST00000452182 ZFYVE27Q5T4F4 411 aa11.93□□□□□ -0.5
SCN9A-204ENST00000452182 C1orf228Q6PIY5 440 aa11.93□□□□□ -0.5
SCN9A-204ENST00000452182 NLRP14Q86W24 1093 aa11.93□□□□□ -0.5
SCN9A-204ENST00000452182 ETFBKMTQ8IXQ9 262 aa11.93□□□□□ -0.5
SCN9A-204ENST00000452182 CFAP52Q8N1V2 620 aa11.93□□□□□ -0.5
SCN9A-204ENST00000452182 SLC35F6Q8N357 371 aa11.93□□□□□ -0.5
SCN9A-204ENST00000452182 C17orf53Q8N3J3 647 aaPredicted RBP11.93□□□□□ -0.5
SCN9A-204ENST00000452182 ALG3Q92685 438 aa11.93□□□□□ -0.5
SCN9A-204ENST00000452182 RBM41Q96IZ5 413 aaKnown RBP11.93□□□□□ -0.5
SCN9A-204ENST00000452182 CSPG4P5Q96PW8 444 aa11.93□□□□□ -0.5
SCN9A-204ENST00000452182 XPO6Q96QU8 1125 aaKnown RBP11.93□□□□□ -0.5
SCN9A-204ENST00000452182 TLR10Q9BXR5 811 aa11.93□□□□□ -0.5
SCN9A-204ENST00000452182 C8orf33Q9H7E9 229 aaPredicted RBP11.93□□□□□ -0.5
SCN9A-204ENST00000452182 CATSPERBQ9H7T0 1116 aa11.93□□□□□ -0.5
SCN9A-204ENST00000452182 CD320Q9NPF0 282 aa11.93□□□□□ -0.5
SCN9A-204ENST00000452182 TMEM248Q9NWD8 314 aa11.93□□□□□ -0.5
SCN9A-204ENST00000452182 STIM2Q9P246 746 aa11.93□□□□□ -0.5
SCN9A-204ENST00000452182 PACSIN2Q9UNF0 486 aaPredicted RBP11.93□□□□□ -0.5
SCN9A-204ENST00000452182 TBC1D30Q9Y2I9 924 aa11.93□□□□□ -0.5
SCN9A-204ENST00000452182 LUC7L3O95232 432 aaKnown RBP11.92□□□□□ -0.5
SCN9A-204ENST00000452182 KRT1P04264 644 aa11.92□□□□□ -0.5
SCN9A-204ENST00000452182 CD48P09326 243 aa11.92□□□□□ -0.5
SCN9A-204ENST00000452182 MAPKAPK2P49137 400 aa11.92□□□□□ -0.5
SCN9A-204ENST00000452182 IRAK1P51617 712 aa11.92□□□□□ -0.5
SCN9A-204ENST00000452182 ALFQ53S48 1182 aa11.92□□□□□ -0.5
SCN9A-204ENST00000452182 ODF2Q5BJF6 829 aa11.92□□□□□ -0.5
SCN9A-204ENST00000452182 RWDD4Q6NW29 188 aaKnown RBP11.92□□□□□ -0.5
SCN9A-204ENST00000452182 SETD3Q86TU7 594 aaPredicted RBP11.92□□□□□ -0.5
SCN9A-204ENST00000452182 ZSCAN30Q86W11 494 aa11.92□□□□□ -0.5
SCN9A-204ENST00000452182 RALGPS2Q86X27 583 aaPredicted RBP11.92□□□□□ -0.5
SCN9A-204ENST00000452182 RTL3Q8N8U3 475 aaKnown RBP11.92□□□□□ -0.5
SCN9A-204ENST00000452182 FIBINQ8TAL6 211 aa11.92□□□□□ -0.5
SCN9A-204ENST00000452182 CHFRQ96EP1 664 aa11.92□□□□□ -0.5
SCN9A-204ENST00000452182 CALN1Q9BXU9 219 aa11.92□□□□□ -0.5
SCN9A-204ENST00000452182 KLHL11Q9NVR0 708 aa11.92□□□□□ -0.5
SCN9A-204ENST00000452182 MPP6Q9NZW5 540 aa11.92□□□□□ -0.5
SCN9A-204ENST00000452182 WNT16Q9UBV4 365 aa11.92□□□□□ -0.5
SCN9A-204ENST00000452182 EFR3BQ9Y2G0 817 aa11.92□□□□□ -0.5
SCN9A-204ENST00000452182 VCANP13611 3396 aa11.92□□□□□ -0.5
SCN9A-204ENST00000452182 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.91□□□□□ -0.5
SCN9A-204ENST00000452182 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.91□□□□□ -0.5
SCN9A-204ENST00000452182 CNTN5O94779 1100 aa11.91□□□□□ -0.5
SCN9A-204ENST00000452182 CTHP32929 405 aa11.91□□□□□ -0.5
SCN9A-204ENST00000452182 PTPN7P35236 360 aa11.91□□□□□ -0.5
SCN9A-204ENST00000452182 DEKP35659 375 aaKnown RBP11.91□□□□□ -0.5
SCN9A-204ENST00000452182 CDKN2BP42772 138 aa11.91□□□□□ -0.5
SCN9A-204ENST00000452182 OXCT1P55809 520 aa11.91□□□□□ -0.5
SCN9A-204ENST00000452182 GNG11P61952 73 aa11.91□□□□□ -0.5
SCN9A-204ENST00000452182 ZNF177Q13360 481 aaPredicted RBP11.91□□□□□ -0.5
SCN9A-204ENST00000452182 PPP2R5EQ16537 467 aa11.91□□□□□ -0.5
SCN9A-204ENST00000452182 PREPLQ4J6C6 727 aaPredicted RBP11.91□□□□□ -0.5
SCN9A-204ENST00000452182 ANKRD20A8PQ5CZ79 823 aa11.91□□□□□ -0.5
SCN9A-204ENST00000452182 TFDP3Q5H9I0 405 aa11.91□□□□□ -0.5
SCN9A-204ENST00000452182 NYAP1Q6ZVC0 841 aa11.91□□□□□ -0.5
SCN9A-204ENST00000452182 MFN1Q8IWA4 741 aa11.91□□□□□ -0.5
SCN9A-204ENST00000452182 CCDC117Q8IWD4 279 aaPredicted RBP11.91□□□□□ -0.5
SCN9A-204ENST00000452182 SUGP1Q8IWZ8 645 aaKnown RBP11.91□□□□□ -0.5
SCN9A-204ENST00000452182 RNF157Q96PX1 679 aa11.91□□□□□ -0.5
SCN9A-204ENST00000452182 CARD9Q9H257 536 aa11.91□□□□□ -0.5
SCN9A-204ENST00000452182 ARHGEF4Q9NR80 690 aa11.91□□□□□ -0.5
SCN9A-204ENST00000452182 PLK2Q9NYY3 685 aa11.91□□□□□ -0.5
SCN9A-204ENST00000452182 SLC27A6Q9Y2P4 619 aa11.91□□□□□ -0.5
SCN9A-204ENST00000452182 CHD5Q8TDI0 1954 aa11.91□□□□□ -0.5
SCN9A-204ENST00000452182 SPECC1L-ADORA2AF8WAN1 911 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 PI4K2BG5E9Z4 385 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 H0Y626 953 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 DCLK1O15075 740 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 DAPK3O43293 454 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 TULP3O75386 442 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 TUBB4AP04350 444 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 ERCC2P18074 760 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 OR1E1P30953 314 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 OPRD1P41143 372 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 CETN2P41208 172 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 ETF1P62495 437 aaKnown RBP11.9□□□□□ -0.5
SCN9A-204ENST00000452182 SLC12A1Q13621 1099 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 CDH18Q13634 790 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 SLC44A4Q53GD3 710 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 C6orf118Q5T5N4 469 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 DCAF12L1Q5VU92 463 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 CXorf57Q6NSI4 855 aaKnown RBP11.9□□□□□ -0.5
SCN9A-204ENST00000452182 MFSD7Q6UXD7 560 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 ZNF783Q6ZMS7 281 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 SPOCD1Q6ZMY3 1216 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 KIAA0907Q7Z7F0 614 aaPredicted RBP11.9□□□□□ -0.5
SCN9A-204ENST00000452182 CIR1Q86X95 450 aaPredicted RBP11.9□□□□□ -0.5
SCN9A-204ENST00000452182 UMODL1-AS1Q8N2C9 162 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 LZTR1Q8N653 840 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.9□□□□□ -0.5
SCN9A-204ENST00000452182 PCDH19Q8TAB3 1148 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 BHMTQ93088 406 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 EXOC4Q96A65 974 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms