RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 C9orf131Q5VYM1 1079 aa8.82□□□□□ -1
LSM5-208ENST00000450169 PLA2G4FQ68DD2 849 aa8.82□□□□□ -1
LSM5-208ENST00000450169 RINT1Q6NUQ1 792 aa8.82□□□□□ -1
LSM5-208ENST00000450169 FAM117BQ6P1L5 589 aa8.82□□□□□ -1
LSM5-208ENST00000450169 POLNQ7Z5Q5 900 aa8.82□□□□□ -1
LSM5-208ENST00000450169 FBXO33Q7Z6M2 555 aa8.82□□□□□ -1
LSM5-208ENST00000450169 SLC9A9Q8IVB4 645 aa8.82□□□□□ -1
LSM5-208ENST00000450169 EXOC8Q8IYI6 725 aa8.82□□□□□ -1
LSM5-208ENST00000450169 CPA5Q8WXQ8 436 aa8.82□□□□□ -1
LSM5-208ENST00000450169 TFAP2CQ92754 450 aa8.82□□□□□ -1
LSM5-208ENST00000450169 USP13Q92995 863 aaPredicted RBP8.82□□□□□ -1
LSM5-208ENST00000450169 ATP6V1E2Q96A05 226 aa8.82□□□□□ -1
LSM5-208ENST00000450169 LENG8Q96PV6 779 aaPredicted RBP8.82□□□□□ -1
LSM5-208ENST00000450169 SLC29A1Q99808 456 aa8.82□□□□□ -1
LSM5-208ENST00000450169 CIB1Q99828 191 aa8.82□□□□□ -1
LSM5-208ENST00000450169 TRPV6Q9H1D0 765 aa8.82□□□□□ -1
LSM5-208ENST00000450169 PARVAQ9NVD7 372 aa8.82□□□□□ -1
LSM5-208ENST00000450169 PNPOQ9NVS9 261 aa8.82□□□□□ -1
LSM5-208ENST00000450169 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.82□□□□□ -1
LSM5-208ENST00000450169 NXF1Q9UBU9 619 aaKnown RBP8.82□□□□□ -1
LSM5-208ENST00000450169 IPO11Q9UI26 975 aaKnown RBP8.82□□□□□ -1
LSM5-208ENST00000450169 CROCCQ5TZA2 2017 aa8.81□□□□□ -1
LSM5-208ENST00000450169 ACOT8O14734 319 aa8.81□□□□□ -1
LSM5-208ENST00000450169 CFLARO15519 480 aa8.81□□□□□ -1
LSM5-208ENST00000450169 AKAP10O43572 662 aa8.81□□□□□ -1
LSM5-208ENST00000450169 ABCB1P08183 1280 aaPredicted RBP8.81□□□□□ -1
LSM5-208ENST00000450169 TGM1P22735 817 aa8.81□□□□□ -1
LSM5-208ENST00000450169 CXCR2P25025 360 aa8.81□□□□□ -1
LSM5-208ENST00000450169 BMPR1AP36894 532 aa8.81□□□□□ -1
LSM5-208ENST00000450169 OPRL1P41146 370 aa8.81□□□□□ -1
LSM5-208ENST00000450169 GRIA3P42263 894 aa8.81□□□□□ -1
LSM5-208ENST00000450169 NR4A2P43354 598 aa8.81□□□□□ -1
LSM5-208ENST00000450169 TMBIM6P55061 237 aa8.81□□□□□ -1
LSM5-208ENST00000450169 GDF10P55107 478 aa8.81□□□□□ -1
LSM5-208ENST00000450169 GRSF1Q12849 480 aaKnown RBP eCLIP8.81□□□□□ -1
LSM5-208ENST00000450169 DNASE1L3Q13609 305 aa8.81□□□□□ -1
LSM5-208ENST00000450169 PTK2BQ14289 1009 aa8.81□□□□□ -1
LSM5-208ENST00000450169 OCLNQ16625 522 aa8.81□□□□□ -1
LSM5-208ENST00000450169 SHROOM1Q2M3G4 852 aaPredicted RBP8.81□□□□□ -1
LSM5-208ENST00000450169 CEP55Q53EZ4 464 aa8.81□□□□□ -1
LSM5-208ENST00000450169 MTX3Q5HYI7 312 aa8.81□□□□□ -1
LSM5-208ENST00000450169 ATAD3BQ5T9A4 648 aa8.81□□□□□ -1
LSM5-208ENST00000450169 ZNF720Q7Z2F6 126 aa8.81□□□□□ -1
LSM5-208ENST00000450169 HAUS6Q7Z4H7 955 aa8.81□□□□□ -1
LSM5-208ENST00000450169 DSG4Q86SJ6 1040 aa8.81□□□□□ -1
LSM5-208ENST00000450169 AKAP14Q86UN6 197 aa8.81□□□□□ -1
LSM5-208ENST00000450169 GALNT13Q8IUC8 556 aa8.81□□□□□ -1
LSM5-208ENST00000450169 GRAMD2AQ8IUY3 354 aa8.81□□□□□ -1
LSM5-208ENST00000450169 FAM178BQ8IXR5 827 aa8.81□□□□□ -1
LSM5-208ENST00000450169 CLIP4Q8N3C7 705 aa8.81□□□□□ -1
LSM5-208ENST00000450169 ZSCAN18Q8TBC5 510 aaPredicted RBP8.81□□□□□ -1
LSM5-208ENST00000450169 LRTOMTQ8WZ04 291 aa8.81□□□□□ -1
LSM5-208ENST00000450169 C17orf80Q9BSJ5 609 aa8.81□□□□□ -1
LSM5-208ENST00000450169 RETREG1Q9H6L5 497 aa8.81□□□□□ -1
LSM5-208ENST00000450169 HMG20AQ9NP66 347 aa8.81□□□□□ -1
LSM5-208ENST00000450169 DUS2Q9NX74 493 aaKnown RBP8.81□□□□□ -1
LSM5-208ENST00000450169 GDAP2Q9NXN4 497 aa8.81□□□□□ -1
LSM5-208ENST00000450169 DNMT3BQ9UBC3 853 aaKnown RBP8.81□□□□□ -1
LSM5-208ENST00000450169 SERPINB13Q9UIV8 391 aa8.81□□□□□ -1
LSM5-208ENST00000450169 ZBTB1Q9Y2K1 713 aa8.81□□□□□ -1
LSM5-208ENST00000450169 ZHX2Q9Y6X8 837 aa8.81□□□□□ -1
LSM5-208ENST00000450169 SCN7AQ01118 1682 aa8.81□□□□□ -1
LSM5-208ENST00000450169 ZNF536O15090 1300 aa8.81□□□□□ -1
LSM5-208ENST00000450169 ZNF195O14628 629 aa8.8□□□□□ -1
LSM5-208ENST00000450169 NUAK1O60285 661 aa8.8□□□□□ -1
LSM5-208ENST00000450169 TOP3BO95985 862 aaKnown RBP8.8□□□□□ -1
LSM5-208ENST00000450169 GNAO1P09471 354 aa8.8□□□□□ -1
LSM5-208ENST00000450169 FGF3P11487 239 aaPredicted RBP8.8□□□□□ -1
LSM5-208ENST00000450169 AKR1B1P15121 316 aa8.8□□□□□ -1
LSM5-208ENST00000450169 GRK2P25098 689 aa8.8□□□□□ -1
LSM5-208ENST00000450169 MAPK1P28482 360 aa8.8□□□□□ -1
LSM5-208ENST00000450169 PRDX5P30044 214 aa8.8□□□□□ -1
LSM5-208ENST00000450169 RFC1P35251 1148 aaPredicted RBP8.8□□□□□ -1
LSM5-208ENST00000450169 RPL22P35268 128 aaKnown RBP8.8□□□□□ -1
LSM5-208ENST00000450169 SERPINB5P36952 375 aa8.8□□□□□ -1
LSM5-208ENST00000450169 NSFP46459 744 aaKnown RBP8.8□□□□□ -1
LSM5-208ENST00000450169 MAPK10P53779 464 aa8.8□□□□□ -1
LSM5-208ENST00000450169 RPL10AP62906 217 aaKnown RBP8.8□□□□□ -1
LSM5-208ENST00000450169 CHRNEQ04844 493 aa8.8□□□□□ -1
LSM5-208ENST00000450169 SLC10A5Q5PT55 438 aa8.8□□□□□ -1
LSM5-208ENST00000450169 LDLRAP1Q5SW96 308 aa8.8□□□□□ -1
LSM5-208ENST00000450169 PPP4R4Q6NUP7 873 aa8.8□□□□□ -1
LSM5-208ENST00000450169 MAMDC4Q6UXC1 1216 aa8.8□□□□□ -1
LSM5-208ENST00000450169 SPOCD1Q6ZMY3 1216 aa8.8□□□□□ -1
LSM5-208ENST00000450169 CCDC81Q6ZN84 652 aa8.8□□□□□ -1
LSM5-208ENST00000450169 KCTD8Q6ZWB6 473 aa8.8□□□□□ -1
LSM5-208ENST00000450169 SNX32Q86XE0 403 aa8.8□□□□□ -1
LSM5-208ENST00000450169 ZNF280CQ8ND82 737 aa8.8□□□□□ -1
LSM5-208ENST00000450169 SLC35B2Q8TB61 432 aa8.8□□□□□ -1
LSM5-208ENST00000450169 HCAR2Q8TDS4 363 aa8.8□□□□□ -1
LSM5-208ENST00000450169 CNDP2Q96KP4 475 aaKnown RBP8.8□□□□□ -1
LSM5-208ENST00000450169 EYA3Q99504 573 aa8.8□□□□□ -1
LSM5-208ENST00000450169 AGO2Q9UKV8 859 aaKnown RBP8.8□□□□□ -1
LSM5-208ENST00000450169 SNX13Q9Y5W8 968 aa8.8□□□□□ -1
LSM5-208ENST00000450169 TEX264Q9Y6I9 313 aa8.8□□□□□ -1
LSM5-208ENST00000450169 SLIT2O94813 1529 aa8.8□□□□□ -1
LSM5-208ENST00000450169 WTIPA6NIX2 430 aaPredicted RBP8.8□□□□□ -1
LSM5-208ENST00000450169 M0QX08 132 aa8.8□□□□□ -1
LSM5-208ENST00000450169 ICMTO60725 284 aa8.8□□□□□ -1
LSM5-208ENST00000450169 DKK1O94907 266 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms