RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 GREB1Q4ZG55 1949 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 ERI2A8K979 691 aaKnown RBP10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 KCNU1A8MYU2 1149 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 POC1B-GALNT4F8VUJ3 575 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 I6L893 689 aaPredicted RBP10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 AP3B1O00203 1094 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 TRDMT1O14717 391 aaKnown RBP10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 PSMD3O43242 534 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 PAGE1O75459 146 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 METTL18O95568 372 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 EFEMP2O95967 443 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 TIMP1P01033 207 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 LAG3P18627 525 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 GARSP41250 739 aaKnown RBP10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 TBX4P57082 545 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 GPX6P59796 221 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 GAD2Q05329 585 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 HP1BP3Q5SSJ5 553 aaPredicted RBP10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 RWDD4Q6NW29 188 aaKnown RBP10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 PID1Q7Z2X4 250 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 CMTR2Q8IYT2 770 aaKnown RBP10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 RNF168Q8IYW5 571 aaPredicted RBP10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 ZNF276Q8N554 614 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 OVCA2Q8WZ82 227 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 SLC39A13Q96H72 371 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 B3GALT6Q96L58 329 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 FCRL2Q96LA5 508 aaPredicted RBP10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 NAT9Q9BTE0 207 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 SIK2Q9H0K1 926 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 EPN3Q9H201 632 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 EURLQ9NYK6 297 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 SEPT10Q9P0V9 454 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 KLHL8Q9P2G9 620 aaPredicted RBP10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 FKBPLQ9UIM3 349 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 CHMP2BQ9UQN3 213 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 CDY1Q9Y6F8 540 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 IKBKGQ9Y6K9 419 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 DNAH12Q6ZR08 3092 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 HTTP42858 3142 aa10.85□□□□□ -0.67
VIPAS39-203ENST00000448935 CENPFP49454 3210 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 WASH4PA8MWX3 477 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 CPP00450 1065 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 SOD2P04179 222 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 SRGAP2BP0DMP2 458 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 CCNCP24863 283 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 SSTR1P30872 391 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 MAGEA3P43357 314 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 GPR15P49685 360 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 MLLT6P55198 1093 aaPredicted RBP10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 RING1Q06587 406 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 WASHC5Q12768 1159 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 TAF10Q12962 218 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 DUSP4Q13115 394 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 TMED2Q15363 201 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 TRIP4Q15650 581 aaPredicted RBP10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 ZSCAN26Q16670 478 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 FAXCQ5TGI0 409 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 MANEALQ5VSG8 457 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 SDHAF4Q5VUM1 108 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 TPGS2Q68CL5 300 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 TIGD7Q6NT04 549 aaPredicted RBP10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 LRRC8BQ6P9F7 803 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 LRRC31Q6UY01 552 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 MAMSTRQ6ZN01 415 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 CAPN12Q6ZSI9 719 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 CAND1Q86VP6 1230 aaKnown RBP10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 TMEM199Q8N511 208 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 BCAS4Q8TDM0 211 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 FBF1Q8TES7 1133 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 DIS3LQ8TF46 1054 aaKnown RBP10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 TMEM169Q96HH4 297 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 BTN2A3PQ96KV6 586 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 TSGA13Q96PP4 275 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 TTLL2Q9BWV7 592 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 UBE2OQ9C0C9 1292 aaKnown RBP10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 INTS9Q9NV88 658 aaKnown RBP10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 HCSTQ9UBK5 93 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 ZC3H7BQ9UGR2 993 aaKnown RBP10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 AFF4Q9UHB7 1163 aaKnown RBP10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 SLC38A8A6NNN8 435 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 RASA4BC9J798 803 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 ARHGAP33O14559 1287 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 MSI1O43347 362 aaKnown RBP10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 RASA4O43374 803 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 BANF1O75531 89 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 BAIAP3O94812 1187 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 ZDHHC11BP0C7U3 371 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 BRAFP15056 766 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 CHN1P15882 459 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 KRT15P19012 456 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 PTPN3P26045 913 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 GBP2P32456 591 aaPredicted RBP10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 PBX3P40426 434 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 MSH2P43246 934 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 PRPSAP1Q14558 356 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 PUS10Q3MIT2 529 aaKnown RBP10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 NUGGCQ68CJ6 796 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 ADGRD1Q6QNK2 874 aa10.84□□□□□ -0.67
VIPAS39-203ENST00000448935 PRSS55Q6UWB4 352 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms