RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 ZBTB17Q13105 803 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 DUSP4Q13115 394 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 EIF4EBP2Q13542 120 aaPredicted RBP9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 LVRNQ6Q4G3 990 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 PRSS55Q6UWB4 352 aaPredicted RBP9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 CES3Q6UWW8 571 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 FAM47EQ6ZV65 393 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 MIB1Q86YT6 1006 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 UNC5BQ8IZJ1 945 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 DNAAF3Q8N9W5 541 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 OR52K1Q8NGK4 314 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 GIPC2Q8TF65 315 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 APBB2Q92870 758 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 FBXO32Q969P5 355 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 HDAC11Q96DB2 347 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 SERAC1Q96JX3 654 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 PAK6Q9NQU5 681 aaPredicted RBP9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 SMYD2Q9NRG4 433 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 MPP6Q9NZW5 540 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 TSC2P49815 1807 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 ARHGAP42A6NI28 874 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 TRIM49D1C9J1S8 452 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 C2CD2LO14523 706 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 LPXNO60711 386 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 ASMTLO95671 621 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 FGFR3P22607 806 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 DNAJC3Q13217 504 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 MRPL58Q14197 206 aaKnown RBP9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 TEX44Q53QW1 395 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 TTC39BQ5VTQ0 682 aaPredicted RBP9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 CCDC121Q6ZUS5 278 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 PIGWQ7Z7B1 504 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 C14orf80Q86SX3 495 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 TCP10LQ8TDR4 215 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 DENND1AQ8TEH3 1009 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 MZB1Q8WU39 189 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 SPOCK2Q92563 424 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 TBC1D31Q96DN5 1066 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 SERPINB11Q96P15 392 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 APOL2Q9BQE5 337 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 BEGAINQ9BUH8 593 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 SEZ6LQ9BYH1 1024 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 PITPNM3Q9BZ71 974 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 CRISPLD1Q9H336 500 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 CATSPERBQ9H7T0 1116 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 NDFIP2Q9NV92 336 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 SYBUQ9NX95 663 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 IL1RAPL1Q9NZN1 696 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 IGSF9Q9P2J2 1179 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 GRID1Q9ULK0 1009 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 HS3ST4Q9Y661 456 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 E9PAM4 449 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 HOXA2O43364 376 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 KRT37O76014 449 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 CSH1P0DML2 217 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 CSH2P0DML3 217 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 MLNP12872 115 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 NFKB1P19838 968 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 TAC1P20366 129 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 PRKCHP24723 683 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 CD68P34810 354 aaPredicted RBP9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 ALDH7A1P49419 539 aaKnown RBP9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 TBX4P57082 545 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 TAF10Q12962 218 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 BMPR2Q13873 1038 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 C10orf120Q5SQS8 335 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 SWT1Q5T5J6 900 aaKnown RBP9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 LGSNQ5TDP6 509 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 ARHGAP18Q8N392 663 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 ATPAF2Q8N5M1 289 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 THOC1Q96FV9 657 aaKnown RBP9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 TTPALQ9BTX7 342 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 SLC39A8Q9C0K1 460 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 BRD8Q9H0E9 1235 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 ALG13Q9NP73 1137 aaKnown RBP9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 EIF2B3Q9NR50 452 aaKnown RBP9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 SLC17A7Q9P2U7 560 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 VANGL2Q9ULK5 521 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 CDY1Q9Y6F8 540 aa9.76□□□□□ -0.85
COL6A4P1-201ENST00000446690 MTMR11A4FU01 709 aa9.75□□□□□ -0.85
COL6A4P1-201ENST00000446690 KCNU1A8MYU2 1149 aa9.75□□□□□ -0.85
COL6A4P1-201ENST00000446690 MTSS1O43312 755 aa9.75□□□□□ -0.85
COL6A4P1-201ENST00000446690 ZWINTO95229 277 aa9.75□□□□□ -0.85
COL6A4P1-201ENST00000446690 C1QAP02745 245 aa9.75□□□□□ -0.85
COL6A4P1-201ENST00000446690 SNRPAP09012 282 aaKnown RBP9.75□□□□□ -0.85
COL6A4P1-201ENST00000446690 GSTA2P09210 222 aa9.75□□□□□ -0.85
COL6A4P1-201ENST00000446690 NEFHP12036 1026 aa9.75□□□□□ -0.85
COL6A4P1-201ENST00000446690 RPL17P18621 184 aaKnown RBP9.75□□□□□ -0.85
COL6A4P1-201ENST00000446690 ADRA1DP25100 572 aa9.75□□□□□ -0.85
COL6A4P1-201ENST00000446690 PSEN1P49768 467 aa9.75□□□□□ -0.85
COL6A4P1-201ENST00000446690 COG7P83436 770 aa9.75□□□□□ -0.85
COL6A4P1-201ENST00000446690 TLE2Q04725 743 aa9.75□□□□□ -0.85
COL6A4P1-201ENST00000446690 PPP2R5DQ14738 602 aa9.75□□□□□ -0.85
COL6A4P1-201ENST00000446690 TRIM60Q495X7 471 aa9.75□□□□□ -0.85
COL6A4P1-201ENST00000446690 SPOUT1Q5T280 376 aaKnown RBP9.75□□□□□ -0.85
COL6A4P1-201ENST00000446690 MROH9Q5TGP6 573 aa9.75□□□□□ -0.85
COL6A4P1-201ENST00000446690 RASIP1Q5U651 963 aa9.75□□□□□ -0.85
COL6A4P1-201ENST00000446690 FAM117BQ6P1L5 589 aa9.75□□□□□ -0.85
COL6A4P1-201ENST00000446690 C6orf89Q6UWU4 347 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms