RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 SMG5Q9UPR3 1016 aaKnown RBP17.76■□□□□ 0.43
LIME1-202ENST00000444951 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.76■□□□□ 0.43
LIME1-202ENST00000444951 LRRD1A4D1F6 860 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 E9PAM4 449 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 PSTPIP1O43586 416 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 CHRNB1P11230 501 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 HOXC13P31276 330 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 L1CAMP32004 1257 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 CHKAP35790 457 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 SGSHP51688 502 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 MTA1Q13330 715 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 PDGFRLQ15198 375 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 EML3Q32P44 896 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 LY6G5CQ5SRR4 150 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 FBXL22Q6P050 247 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 TXNDC11Q6PKC3 985 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 LRRC31Q6UY01 552 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 ERMP1Q7Z2K6 904 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 TMEM25Q86YD3 366 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 DDI1Q8WTU0 396 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 CD101Q93033 1021 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 IGSF8Q969P0 613 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 RNF25Q96BH1 459 aaPredicted RBP17.75■□□□□ 0.43
LIME1-202ENST00000444951 OTUB2Q96DC9 234 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 EPAS1Q99814 870 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 PRMT1Q99873 361 aaKnown RBP17.75■□□□□ 0.43
LIME1-202ENST00000444951 CALN1Q9BXU9 219 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 OSBPL2Q9H1P3 480 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 EPC1Q9H2F5 836 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 SPHK2Q9NRA0 654 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 KCND1Q9NSA2 647 aa17.75■□□□□ 0.43
LIME1-202ENST00000444951 NEDD8-MDP1E9PL57 170 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 ENC1O14682 589 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 CHADO15335 359 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 DAPK3O43293 454 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 TBL1XO60907 577 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 NFATC1O95644 943 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 CD48P09326 243 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 CTNNA1P35221 906 aaKnown RBP17.74■□□□□ 0.43
LIME1-202ENST00000444951 IRAK1P51617 712 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 TPI1P60174 286 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 RPS24P62847 133 aaKnown RBP17.74■□□□□ 0.43
LIME1-202ENST00000444951 FOXK2Q01167 660 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 SATB1Q01826 763 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 LLGL1Q15334 1064 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 MEI1Q5TIA1 1274 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 LRRC38Q5VT99 294 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 POLNQ7Z5Q5 900 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 CCDC50Q8IVM0 306 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 ADGRG2Q8IZP9 1017 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 UBL4BQ8N7F7 174 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 RAPGEF5Q92565 580 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 ATP2A3Q93084 1043 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 TMA16Q96EY4 203 aaKnown RBP17.74■□□□□ 0.43
LIME1-202ENST00000444951 C1orf74Q96LT6 269 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 PRICKLE1Q96MT3 831 aaPredicted RBP17.74■□□□□ 0.43
LIME1-202ENST00000444951 PSMB7Q99436 277 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 FAM83CQ9BQN1 747 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 BBS2Q9BXC9 721 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 PCDH18Q9HCL0 1135 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 HPS4Q9NQG7 708 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 C2orf42Q9NWW7 574 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 DDX56Q9NY93 547 aaKnown RBP17.74■□□□□ 0.43
LIME1-202ENST00000444951 GTSE1Q9NYZ3 720 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 MPP6Q9NZW5 540 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 STOML2Q9UJZ1 356 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 PCDHA3Q9Y5H8 950 aa17.74■□□□□ 0.43
LIME1-202ENST00000444951 CCDC66A2RUB6 948 aa17.73■□□□□ 0.43
LIME1-202ENST00000444951 MIF4GDA9UHW6 222 aaKnown RBP17.73■□□□□ 0.43
LIME1-202ENST00000444951 EEF2KO00418 725 aaKnown RBP17.73■□□□□ 0.43
LIME1-202ENST00000444951 LRIG2O94898 1065 aa17.73■□□□□ 0.43
LIME1-202ENST00000444951 CYBBP04839 570 aa17.73■□□□□ 0.43
LIME1-202ENST00000444951 CYP17A1P05093 508 aa17.73■□□□□ 0.43
LIME1-202ENST00000444951 GOT1P17174 413 aa17.73■□□□□ 0.43
LIME1-202ENST00000444951 MSNP26038 577 aaKnown RBP17.73■□□□□ 0.43
LIME1-202ENST00000444951 CTNNA2P26232 953 aa17.73■□□□□ 0.43
LIME1-202ENST00000444951 ARL4AP40617 200 aa17.73■□□□□ 0.43
LIME1-202ENST00000444951 DMWDQ09019 674 aa17.73■□□□□ 0.43
LIME1-202ENST00000444951 MMRN1Q13201 1228 aa17.73■□□□□ 0.43
LIME1-202ENST00000444951 DHCR24Q15392 516 aa17.73■□□□□ 0.43
LIME1-202ENST00000444951 RPS6KA1Q15418 735 aa17.73■□□□□ 0.43
LIME1-202ENST00000444951 RABGAP1LQ5R372 815 aa17.73■□□□□ 0.43
LIME1-202ENST00000444951 RHBDF2Q6PJF5 856 aa17.73■□□□□ 0.43
LIME1-202ENST00000444951 Q6ZS52 159 aa17.73■□□□□ 0.43
LIME1-202ENST00000444951 ZSCAN30Q86W11 494 aa17.73■□□□□ 0.43
LIME1-202ENST00000444951 PSTKQ8IV42 348 aaKnown RBP17.73■□□□□ 0.43
LIME1-202ENST00000444951 FAM217AQ8IXS0 508 aa17.73■□□□□ 0.43
LIME1-202ENST00000444951 CPXM2Q8N436 756 aa17.73■□□□□ 0.43
LIME1-202ENST00000444951 CPA6Q8N4T0 437 aa17.73■□□□□ 0.43
LIME1-202ENST00000444951 NAT16Q8N8M0 369 aa17.73■□□□□ 0.43
LIME1-202ENST00000444951 HJURPQ8NCD3 748 aaPredicted RBP17.73■□□□□ 0.43
LIME1-202ENST00000444951 CSGALNACT1Q8TDX6 532 aa17.73■□□□□ 0.43
LIME1-202ENST00000444951 ALG3Q92685 438 aa17.73■□□□□ 0.43
LIME1-202ENST00000444951 TBC1D31Q96DN5 1066 aa17.73■□□□□ 0.43
LIME1-202ENST00000444951 NCOR2Q9Y618 2525 aa17.72■□□□□ 0.43
LIME1-202ENST00000444951 MED19A0JLT2 244 aaPredicted RBP17.72■□□□□ 0.43
LIME1-202ENST00000444951 TYW5A2RUC4 315 aaKnown RBP17.72■□□□□ 0.43
LIME1-202ENST00000444951 H3BRJ5 948 aa17.72■□□□□ 0.43
LIME1-202ENST00000444951 DDX3YO15523 660 aaKnown RBP17.72■□□□□ 0.43
LIME1-202ENST00000444951 CNTN5O94779 1100 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms