RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 C3orf20Q8ND61 904 aa19.21■□□□□ 0.67
CCDC188-202ENST00000444532 VCPIP1Q96JH7 1222 aa19.21■□□□□ 0.67
CCDC188-202ENST00000444532 SELENOOQ9BVL4 669 aa19.21■□□□□ 0.67
CCDC188-202ENST00000444532 MKRN2Q9H000 416 aaKnown RBP19.21■□□□□ 0.67
CCDC188-202ENST00000444532 FBRSQ9HAH7 460 aa19.21■□□□□ 0.67
CCDC188-202ENST00000444532 ANLNQ9NQW6 1124 aa19.21■□□□□ 0.67
CCDC188-202ENST00000444532 CEP192Q8TEP8 1941 aa19.2■□□□□ 0.66
CCDC188-202ENST00000444532 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.2■□□□□ 0.66
CCDC188-202ENST00000444532 BCLAF3A2AJT9 711 aaKnown RBP19.2■□□□□ 0.66
CCDC188-202ENST00000444532 I6L893 689 aaPredicted RBP19.2■□□□□ 0.66
CCDC188-202ENST00000444532 AP5Z1O43299 807 aa19.2■□□□□ 0.66
CCDC188-202ENST00000444532 SRPRAP08240 638 aaKnown RBP19.2■□□□□ 0.66
CCDC188-202ENST00000444532 HLA-EP13747 358 aa19.2■□□□□ 0.66
CCDC188-202ENST00000444532 MPLP40238 635 aa19.2■□□□□ 0.66
CCDC188-202ENST00000444532 PBX1P40424 430 aa19.2■□□□□ 0.66
CCDC188-202ENST00000444532 PRKCIP41743 596 aa19.2■□□□□ 0.66
CCDC188-202ENST00000444532 COPAP53621 1224 aa19.2■□□□□ 0.66
CCDC188-202ENST00000444532 ATXN1P54253 815 aaKnown RBP19.2■□□□□ 0.66
CCDC188-202ENST00000444532 CDH4P55283 916 aa19.2■□□□□ 0.66
CCDC188-202ENST00000444532 ATP11AP98196 1134 aa19.2■□□□□ 0.66
CCDC188-202ENST00000444532 ZNF177Q13360 481 aaPredicted RBP19.2■□□□□ 0.66
CCDC188-202ENST00000444532 PLEKHG6Q3KR16 790 aa19.2■□□□□ 0.66
CCDC188-202ENST00000444532 CCDC14Q49A88 953 aa19.2■□□□□ 0.66
CCDC188-202ENST00000444532 KIAA1324Q6UXG2 1013 aaKnown RBP19.2■□□□□ 0.66
CCDC188-202ENST00000444532 PRR23CQ6ZRP0 262 aa19.2■□□□□ 0.66
CCDC188-202ENST00000444532 STRADAQ7RTN6 431 aa19.2■□□□□ 0.66
CCDC188-202ENST00000444532 C14orf80Q86SX3 495 aa19.2■□□□□ 0.66
CCDC188-202ENST00000444532 CIR1Q86X95 450 aaPredicted RBP19.2■□□□□ 0.66
CCDC188-202ENST00000444532 OR2T3Q8NH03 318 aa19.2■□□□□ 0.66
CCDC188-202ENST00000444532 JOSD2Q8TAC2 188 aa19.2■□□□□ 0.66
CCDC188-202ENST00000444532 CENPIQ92674 756 aaPredicted RBP19.2■□□□□ 0.66
CCDC188-202ENST00000444532 PRCCQ92733 491 aaPredicted RBP19.2■□□□□ 0.66
CCDC188-202ENST00000444532 IQCDQ96DY2 449 aa19.2■□□□□ 0.66
CCDC188-202ENST00000444532 SIPA1Q96FS4 1042 aa19.2■□□□□ 0.66
CCDC188-202ENST00000444532 SLC6A17Q9H1V8 727 aa19.2■□□□□ 0.66
CCDC188-202ENST00000444532 HAUS4Q9H6D7 363 aa19.2■□□□□ 0.66
CCDC188-202ENST00000444532 ITM2CQ9NQX7 267 aa19.2■□□□□ 0.66
CCDC188-202ENST00000444532 ERVW-1Q9UQF0 538 aa19.2■□□□□ 0.66
CCDC188-202ENST00000444532 NUP205Q92621 2012 aa19.2■□□□□ 0.66
CCDC188-202ENST00000444532 SDK1Q7Z5N4 2213 aa19.19■□□□□ 0.66
CCDC188-202ENST00000444532 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.19■□□□□ 0.66
CCDC188-202ENST00000444532 IGHV1OR15-9A0A0B4J2B8 117 aa19.19■□□□□ 0.66
CCDC188-202ENST00000444532 A0A1W2PQJ5 194 aa19.19■□□□□ 0.66
CCDC188-202ENST00000444532 DRGXA6NNA5 263 aa19.19■□□□□ 0.66
CCDC188-202ENST00000444532 C7P10643 843 aa19.19■□□□□ 0.66
CCDC188-202ENST00000444532 SDHBP21912 280 aa19.19■□□□□ 0.66
CCDC188-202ENST00000444532 RFC1P35251 1148 aaPredicted RBP19.19■□□□□ 0.66
CCDC188-202ENST00000444532 DHPSP49366 369 aaPredicted RBP19.19■□□□□ 0.66
CCDC188-202ENST00000444532 ECT2LQ008S8 904 aa19.19■□□□□ 0.66
CCDC188-202ENST00000444532 CREB5Q02930 508 aa19.19■□□□□ 0.66
CCDC188-202ENST00000444532 SULT2A1Q06520 285 aa19.19■□□□□ 0.66
CCDC188-202ENST00000444532 ARID5BQ14865 1188 aa19.19■□□□□ 0.66
CCDC188-202ENST00000444532 CXorf57Q6NSI4 855 aaKnown RBP19.19■□□□□ 0.66
CCDC188-202ENST00000444532 FAM131BQ86XD5 332 aa19.19■□□□□ 0.66
CCDC188-202ENST00000444532 TMEFF1Q8IYR6 380 aa19.19■□□□□ 0.66
CCDC188-202ENST00000444532 ZNF683Q8IZ20 524 aa19.19■□□□□ 0.66
CCDC188-202ENST00000444532 MCOLN2Q8IZK6 566 aa19.19■□□□□ 0.66
CCDC188-202ENST00000444532 APCDD1Q8J025 514 aa19.19■□□□□ 0.66
CCDC188-202ENST00000444532 MYO19Q96H55 970 aa19.19■□□□□ 0.66
CCDC188-202ENST00000444532 VPS45Q9NRW7 570 aa19.19■□□□□ 0.66
CCDC188-202ENST00000444532 USP36Q9P275 1121 aaKnown RBP19.19■□□□□ 0.66
CCDC188-202ENST00000444532 CYP8B1Q9UNU6 501 aa19.19■□□□□ 0.66
CCDC188-202ENST00000444532 TBC1D30Q9Y2I9 924 aa19.19■□□□□ 0.66
CCDC188-202ENST00000444532 IGLV3-10A0A075B6K4 115 aa19.18■□□□□ 0.66
CCDC188-202ENST00000444532 TCRBV5S1A1TA0A578 114 aa19.18■□□□□ 0.66
CCDC188-202ENST00000444532 ANKRD62A6NC57 917 aa19.18■□□□□ 0.66
CCDC188-202ENST00000444532 GJB6O95452 261 aa19.18■□□□□ 0.66
CCDC188-202ENST00000444532 GZMAP12544 262 aa19.18■□□□□ 0.66
CCDC188-202ENST00000444532 GPD1P21695 349 aa19.18■□□□□ 0.66
CCDC188-202ENST00000444532 GGCXP38435 758 aa19.18■□□□□ 0.66
CCDC188-202ENST00000444532 RPL6Q02878 288 aaKnown RBP19.18■□□□□ 0.66
CCDC188-202ENST00000444532 KLHL30Q0D2K2 578 aa19.18■□□□□ 0.66
CCDC188-202ENST00000444532 CDO1Q16878 200 aa19.18■□□□□ 0.66
CCDC188-202ENST00000444532 C15orf59Q2T9L4 293 aaPredicted RBP19.18■□□□□ 0.66
CCDC188-202ENST00000444532 ARL13BQ3SXY8 428 aa19.18■□□□□ 0.66
CCDC188-202ENST00000444532 RNF219Q5W0B1 726 aaPredicted RBP19.18■□□□□ 0.66
CCDC188-202ENST00000444532 DNAJC24Q6P3W2 148 aa19.18■□□□□ 0.66
CCDC188-202ENST00000444532 WDR59Q6PJI9 974 aa19.18■□□□□ 0.66
CCDC188-202ENST00000444532 CYP2U1Q7Z449 544 aa19.18■□□□□ 0.66
CCDC188-202ENST00000444532 ZNF366Q8N895 744 aa19.18■□□□□ 0.66
CCDC188-202ENST00000444532 SYN2Q92777 582 aaPredicted RBP19.18■□□□□ 0.66
CCDC188-202ENST00000444532 MRGPRX3Q96LB0 322 aa19.18■□□□□ 0.66
CCDC188-202ENST00000444532 FEM1AQ9BSK4 669 aa19.18■□□□□ 0.66
CCDC188-202ENST00000444532 PRSS16Q9NQE7 514 aa19.18■□□□□ 0.66
CCDC188-202ENST00000444532 TMPRSS4Q9NRS4 437 aa19.18■□□□□ 0.66
CCDC188-202ENST00000444532 IFNKQ9P0W0 207 aa19.18■□□□□ 0.66
CCDC188-202ENST00000444532 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.18■□□□□ 0.66
CCDC188-202ENST00000444532 TNRC6BQ9UPQ9 1833 aaKnown RBP19.17■□□□□ 0.66
CCDC188-202ENST00000444532 E9PAM4 449 aa19.17■□□□□ 0.66
CCDC188-202ENST00000444532 TPM3P06753 285 aa19.17■□□□□ 0.66
CCDC188-202ENST00000444532 ACADMP11310 421 aa19.17■□□□□ 0.66
CCDC188-202ENST00000444532 MZF1P28698 734 aaPredicted RBP19.17■□□□□ 0.66
CCDC188-202ENST00000444532 OXTRP30559 389 aa19.17■□□□□ 0.66
CCDC188-202ENST00000444532 ADRA1BP35368 520 aa19.17■□□□□ 0.66
CCDC188-202ENST00000444532 NNMTP40261 264 aa19.17■□□□□ 0.66
CCDC188-202ENST00000444532 DPP6P42658 865 aa19.17■□□□□ 0.66
CCDC188-202ENST00000444532 ID4P47928 161 aa19.17■□□□□ 0.66
CCDC188-202ENST00000444532 IRAK1P51617 712 aa19.17■□□□□ 0.66
CCDC188-202ENST00000444532 HNRNPA1L2Q32P51 320 aaKnown RBP19.17■□□□□ 0.66
CCDC188-202ENST00000444532 SH3PXD2AQ5TCZ1 1133 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms