RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 KCNT1Q5JUK3 1230 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 SPANXN3Q5MJ09 141 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 RABGAP1LQ5R372 815 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 ANKRD20A2Q5SQ80 823 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 SH3PXD2AQ5TCZ1 1133 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 ANKRD20A1Q5TYW2 823 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 RASIP1Q5U651 963 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 ANKRD20A3Q5VUR7 823 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 KAZNQ674X7 775 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 KIAA1841Q6NSI8 718 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 AADACL2Q6P093 401 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 LLGL2Q6P1M3 1020 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 LILRA6Q6PI73 481 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 KIAA0408Q6ZU52 694 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 C3orf62Q6ZUJ4 267 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 MICALCLQ6ZW33 695 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 SCD5Q86SK9 330 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 NLRP14Q86W24 1093 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 FAM131BQ86XD5 332 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 HERC6Q8IVU3 1022 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 TRIM42Q8IWZ5 723 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 CCDC13Q8IYE1 715 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 ZNF683Q8IZ20 524 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 CPXM2Q8N436 756 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 CHCHD4Q8N4Q1 142 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 CCDC185Q8N715 623 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 ANKS4BQ8N8V4 417 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 FAM71DQ8N9W8 422 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 COLGALT1Q8NBJ5 622 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 TSEN2Q8NCE0 465 aaKnown RBP2.9□□□□□ -1.95
LINC00393-201ENST00000443621 GSDMBQ8TAX9 411 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 SLC7A14Q8TBB6 771 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 ZSCAN18Q8TBC5 510 aaPredicted RBP2.9□□□□□ -1.95
LINC00393-201ENST00000443621 DTX3LQ8TDB6 740 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 KCNV2Q8TDN2 545 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 CLEC4CQ8WTT0 213 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 NSMCE1Q8WV22 266 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 SLC44A1Q8WWI5 657 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 ATG4AQ8WYN0 398 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 HERVK_113Q902F9 699 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 ATP2A3Q93084 1043 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 FBXO32Q969P5 355 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 ISL2Q96A47 359 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 ACDQ96AP0 544 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 TADA1Q96BN2 335 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 OTUB2Q96DC9 234 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 P2RY11Q96G91 374 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 PIWIL1Q96J94 861 aaKnown RBP2.9□□□□□ -1.95
LINC00393-201ENST00000443621 FAM84AQ96KN4 292 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 SIGLEC10Q96LC7 697 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 KCTD15Q96SI1 283 aaPredicted RBP2.9□□□□□ -1.95
LINC00393-201ENST00000443621 RAD9AQ99638 391 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 EBNA1BP2Q99848 306 aaKnown RBP2.9□□□□□ -1.95
LINC00393-201ENST00000443621 PRMT1Q99873 361 aaKnown RBP2.9□□□□□ -1.95
LINC00393-201ENST00000443621 PAAF1Q9BRP4 392 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 SIKE1Q9BRV8 207 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 TRIM51Q9BSJ1 452 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 TMEM121Q9BTD3 319 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 SLC2A11Q9BYW1 496 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 MAGEB5Q9BZ81 275 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 GPR62Q9BZJ7 368 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 SLC25A51Q9H1U9 297 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 EPN3Q9H201 632 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 GBA3Q9H227 469 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 NEUROG2Q9H2A3 272 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 DPH5Q9H2P9 285 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 PRDM12Q9H4Q4 367 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 FAM96AQ9H5X1 160 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 CASS4Q9NQ75 786 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 PRDM5Q9NQX1 630 aaPredicted RBP2.9□□□□□ -1.95
LINC00393-201ENST00000443621 RAB6BQ9NRW1 208 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 MRPL17Q9NRX2 175 aaKnown RBP2.9□□□□□ -1.95
LINC00393-201ENST00000443621 ETNK2Q9NVF9 386 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 SMARCAL1Q9NZC9 954 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 NINJ2Q9NZG7 142 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.9□□□□□ -1.95
LINC00393-201ENST00000443621 TRPM5Q9NZQ8 1165 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 BFARQ9NZS9 450 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.9□□□□□ -1.95
LINC00393-201ENST00000443621 MARCH2Q9P0N8 246 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 PSMC3IPQ9P2W1 217 aaPredicted RBP2.9□□□□□ -1.95
LINC00393-201ENST00000443621 ZNF212Q9UDV6 495 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 DNAJB4Q9UDY4 337 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 CHORDC1Q9UHD1 332 aaPredicted RBP2.9□□□□□ -1.95
LINC00393-201ENST00000443621 RABGEF1Q9UJ41 708 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 RPL26L1Q9UNX3 145 aaKnown RBP2.9□□□□□ -1.95
LINC00393-201ENST00000443621 NEU3Q9UQ49 428 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 NAALADL1Q9UQQ1 740 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 INPP5FQ9Y2H2 1132 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 TBC1D30Q9Y2I9 924 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 HEY1Q9Y5J3 304 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 IKBKGQ9Y6K9 419 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 SHROOM3Q8TF72 1996 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 MYO16Q9Y6X6 1858 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 TET1Q8NFU7 2136 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 LOC285095A0A1B0GVY8 99 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 EXOC1LA0A1B0GW35 172 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 A0A1W2PQH9 124 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 WDR27A2RRH5 827 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 TYW5A2RUC4 315 aaKnown RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms