RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 VPS37AQ8NEZ2 397 aa22.87■■□□□ 1.25
CTDSPL-206ENST00000443503 DACH2Q96NX9 599 aa22.87■■□□□ 1.25
CTDSPL-206ENST00000443503 TUBGCP4Q9UGJ1 667 aa22.87■■□□□ 1.25
CTDSPL-206ENST00000443503 STARD13Q9Y3M8 1113 aa22.87■■□□□ 1.25
CTDSPL-206ENST00000443503 TCRBV9S1A1TA0A576 114 aa22.87■■□□□ 1.25
CTDSPL-206ENST00000443503 CRABP2P29373 138 aa22.87■■□□□ 1.25
CTDSPL-206ENST00000443503 TRABD2AQ86V40 505 aa22.87■■□□□ 1.25
CTDSPL-206ENST00000443503 EBNA1BP2Q99848 306 aaKnown RBP22.87■■□□□ 1.25
CTDSPL-206ENST00000443503 CDH9Q9ULB4 789 aa22.87■■□□□ 1.25
CTDSPL-206ENST00000443503 EIF3LQ9Y262 564 aaKnown RBP22.87■■□□□ 1.25
CTDSPL-206ENST00000443503 STK25O00506 426 aa22.87■■□□□ 1.25
CTDSPL-206ENST00000443503 PSMA4P25789 261 aaKnown RBP22.87■■□□□ 1.25
CTDSPL-206ENST00000443503 CDK7P50613 346 aa22.87■■□□□ 1.25
CTDSPL-206ENST00000443503 BST1Q10588 318 aa22.87■■□□□ 1.25
CTDSPL-206ENST00000443503 NFYCQ13952 458 aa22.87■■□□□ 1.25
CTDSPL-206ENST00000443503 PCBP1Q15365 356 aaKnown RBP eCLIP22.87■■□□□ 1.259e-6■■■■■ 29.7
CTDSPL-206ENST00000443503 ASTE1Q2TB18 679 aaPredicted RBP22.87■■□□□ 1.25
CTDSPL-206ENST00000443503 VPS50Q96JG6 964 aa22.87■■□□□ 1.25
CTDSPL-206ENST00000443503 CNBD2Q96M20 576 aa22.87■■□□□ 1.25
CTDSPL-206ENST00000443503 ENTPD7Q9NQZ7 604 aa22.87■■□□□ 1.25
CTDSPL-206ENST00000443503 CRYL1Q9Y2S2 319 aa22.87■■□□□ 1.25
CTDSPL-206ENST00000443503 FAM237BA0A1B0GVD1 139 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 A0A1W2PPM1 405 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 C5orf58C9J3I9 102 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 BAIAP3O94812 1187 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 PIGNO95427 931 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 IZUMO2Q6UXV1 221 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 SPASTQ9UBP0 616 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 SPEF2Q9C093 1822 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 FKBP6O75344 327 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 ITGB6P18564 788 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 CDH2P19022 906 aaPredicted RBP22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 KRT72Q14CN4 511 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 LRRC4CQ9HCJ2 640 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 TTLL13PA6NNM8 815 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 CILPO75339 1184 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 HOXC6P09630 235 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 CHRNB2P17787 502 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 WEE1P30291 646 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 ICAM3P32942 547 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 CRYBB1P53674 252 aaPredicted RBP22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 LCLAT1Q6UWP7 414 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 PIWIL2Q8TC59 973 aaKnown RBP22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 PPP2R3CQ969Q6 453 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 PCDHA2Q9Y5H9 948 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 MYH2Q9UKX2 1941 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 hCG_2014768A0A024R1R8 64 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 SOWAHBA6NEL2 793 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 TCHHL1Q5QJ38 904 aaPredicted RBP22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 SNX30Q5VWJ9 437 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 YTHDF3Q7Z739 585 aaKnown RBP22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 PRCCQ92733 491 aaPredicted RBP22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 NTPCRQ9BSD7 190 aaKnown RBP22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 SAR1AQ9NR31 198 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 CHCHD3Q9NX63 227 aaKnown RBP22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 ATRNL1Q5VV63 1379 aa22.86■■□□□ 1.25
CTDSPL-206ENST00000443503 BUD23O43709 281 aaKnown RBP22.85■■□□□ 1.25
CTDSPL-206ENST00000443503 PDE5AO76074 875 aa22.85■■□□□ 1.25
CTDSPL-206ENST00000443503 MZF1P28698 734 aaPredicted RBP22.85■■□□□ 1.25
CTDSPL-206ENST00000443503 CD52P31358 61 aa22.85■■□□□ 1.25
CTDSPL-206ENST00000443503 JAG1P78504 1218 aa22.85■■□□□ 1.25
CTDSPL-206ENST00000443503 WASHC2DQ5SRD0 308 aa22.85■■□□□ 1.25
CTDSPL-206ENST00000443503 CACHD1Q5VU97 1274 aa22.85■■□□□ 1.25
CTDSPL-206ENST00000443503 CIPCQ9C0C6 399 aa22.85■■□□□ 1.25
CTDSPL-206ENST00000443503 APOBEC3GQ9HC16 384 aaKnown RBP22.85■■□□□ 1.25
CTDSPL-206ENST00000443503 FAM95CA0A1B0GW59 222 aa22.85■■□□□ 1.25
CTDSPL-206ENST00000443503 MRPS5P82675 430 aaKnown RBP22.85■■□□□ 1.25
CTDSPL-206ENST00000443503 GRAMD4Q6IC98 578 aa22.85■■□□□ 1.25
CTDSPL-206ENST00000443503 ATP11BQ9Y2G3 1177 aa22.85■■□□□ 1.25
CTDSPL-206ENST00000443503 NAB1Q13506 487 aa22.85■■□□□ 1.25
CTDSPL-206ENST00000443503 NR6A1Q15406 480 aa22.85■■□□□ 1.25
CTDSPL-206ENST00000443503 PKN3Q6P5Z2 889 aa22.85■■□□□ 1.25
CTDSPL-206ENST00000443503 MYLPFQ96A32 169 aa22.85■■□□□ 1.25
CTDSPL-206ENST00000443503 PRDM16Q9HAZ2 1276 aa22.85■■□□□ 1.25
CTDSPL-206ENST00000443503 PTPRHQ9HD43 1115 aa22.85■■□□□ 1.25
CTDSPL-206ENST00000443503 LOC102724159A0A0B4J2E5 919 aa22.85■■□□□ 1.25
CTDSPL-206ENST00000443503 MAGEA13PA6NCF6 341 aa22.85■■□□□ 1.25
CTDSPL-206ENST00000443503 RTN3O95197 1032 aaPredicted RBP22.85■■□□□ 1.25
CTDSPL-206ENST00000443503 PWP2Q15269 919 aaKnown RBP22.85■■□□□ 1.25
CTDSPL-206ENST00000443503 C9orf57Q5W0N0 161 aa22.85■■□□□ 1.25
CTDSPL-206ENST00000443503 TAS2R13Q9NYV9 303 aa22.85■■□□□ 1.25
CTDSPL-206ENST00000443503 SMIM28A0A1B0GU29 152 aa22.84■■□□□ 1.25
CTDSPL-206ENST00000443503 C16orf96A6NNT2 1141 aa22.84■■□□□ 1.25
CTDSPL-206ENST00000443503 DARSP14868 501 aaKnown RBP22.84■■□□□ 1.25
CTDSPL-206ENST00000443503 PEX5P50542 639 aa22.84■■□□□ 1.25
CTDSPL-206ENST00000443503 SLC30A9Q6PML9 568 aa22.84■■□□□ 1.25
CTDSPL-206ENST00000443503 SNX32Q86XE0 403 aa22.84■■□□□ 1.25
CTDSPL-206ENST00000443503 XYLT1Q86Y38 959 aa22.84■■□□□ 1.25
CTDSPL-206ENST00000443503 KCNK4Q9NYG8 393 aa22.84■■□□□ 1.25
CTDSPL-206ENST00000443503 PNMA8BQ9ULN7 279 aaPredicted RBP22.84■■□□□ 1.25
CTDSPL-206ENST00000443503 ALBP02768 609 aa22.84■■□□□ 1.25
CTDSPL-206ENST00000443503 CYP2C18P33260 490 aa22.84■■□□□ 1.25
CTDSPL-206ENST00000443503 KPNB1Q14974 876 aaKnown RBP22.84■■□□□ 1.25
CTDSPL-206ENST00000443503 SCARA3Q6AZY7 606 aa22.84■■□□□ 1.25
CTDSPL-206ENST00000443503 FBXO39Q8N4B4 442 aa22.84■■□□□ 1.25
CTDSPL-206ENST00000443503 TFAP2BQ92481 460 aa22.84■■□□□ 1.25
CTDSPL-206ENST00000443503 INPP5DQ92835 1189 aa22.84■■□□□ 1.25
CTDSPL-206ENST00000443503 BLOC1S6Q9UL45 172 aa22.84■■□□□ 1.25
CTDSPL-206ENST00000443503 SERPINH1P50454 418 aaKnown RBP22.84■■□□□ 1.25
CTDSPL-206ENST00000443503 JADE3Q92613 823 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms