RNA–Protein interactions for RNA: ENST00000442419.1

SNHG11-210, Transcript of small nucleolar RNA host gene 11, human

TSL 3

Gene SNHG11, Length 741 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG11-210	ENST00000442419	PSEN1	P49768	467 aa		12.09	□□□□□ -0.47
SNHG11-210	ENST00000442419	GALK1	P51570	392 aa		12.09	□□□□□ -0.47
SNHG11-210	ENST00000442419	PDGFRL	Q15198	375 aa		12.09	□□□□□ -0.47
SNHG11-210	ENST00000442419	ZNF423	Q2M1K9	1284 aa		12.09	□□□□□ -0.47
SNHG11-210	ENST00000442419	SLC25A52	Q3SY17	297 aa		12.09	□□□□□ -0.47
SNHG11-210	ENST00000442419	TRIM61	Q5EBN2	209 aa		12.09	□□□□□ -0.47
SNHG11-210	ENST00000442419	SNX30	Q5VWJ9	437 aa		12.09	□□□□□ -0.47
SNHG11-210	ENST00000442419	CC2D1A	Q6P1N0	951 aa	Predicted RBP	12.09	□□□□□ -0.47
SNHG11-210	ENST00000442419	CMTM8	Q8IZV2	173 aa		12.09	□□□□□ -0.47
SNHG11-210	ENST00000442419	DEFB106A	Q8N104	65 aa		12.09	□□□□□ -0.47
SNHG11-210	ENST00000442419	ARFGAP1	Q8N6T3	406 aa		12.09	□□□□□ -0.47
SNHG11-210	ENST00000442419	EMC1	Q8N766	993 aa		12.09	□□□□□ -0.47
SNHG11-210	ENST00000442419	TSTD1	Q8NFU3	115 aa		12.09	□□□□□ -0.47
SNHG11-210	ENST00000442419	SCAMP5	Q8TAC9	235 aa		12.09	□□□□□ -0.47
SNHG11-210	ENST00000442419	ZNF592	Q92610	1267 aa		12.09	□□□□□ -0.47
SNHG11-210	ENST00000442419	PBK	Q96KB5	322 aa		12.09	□□□□□ -0.47
SNHG11-210	ENST00000442419	OSBPL9	Q96SU4	736 aa		12.09	□□□□□ -0.47
SNHG11-210	ENST00000442419	NPY6R	Q99463	290 aa		12.09	□□□□□ -0.47
SNHG11-210	ENST00000442419	SLC46A2	Q9BY10	475 aa		12.09	□□□□□ -0.47
SNHG11-210	ENST00000442419	CARD9	Q9H257	536 aa		12.09	□□□□□ -0.47
SNHG11-210	ENST00000442419	EBF3	Q9H4W6	596 aa		12.09	□□□□□ -0.47
SNHG11-210	ENST00000442419	IL21	Q9HBE4	155 aa		12.09	□□□□□ -0.47
SNHG11-210	ENST00000442419	TTC7A	Q9ULT0	858 aa	Predicted RBP	12.09	□□□□□ -0.47
SNHG11-210	ENST00000442419	SLC27A5	Q9Y2P5	690 aa		12.09	□□□□□ -0.47
SNHG11-210	ENST00000442419	MRFAP1	Q9Y605	127 aa		12.09	□□□□□ -0.47
SNHG11-210	ENST00000442419	ADAMTS20	P59510	1910 aa		12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	LRCH4	O75427	683 aa		12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	RNF8	O76064	485 aa		12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	CSH1	P0DML2	217 aa		12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	CSH2	P0DML3	217 aa		12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	DES	P17661	470 aa		12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	DDX6	P26196	483 aa	Known RBP eCLIP	12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	YWHAQ	P27348	245 aa		12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	AVPR1A	P37288	418 aa		12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	RNASE9	P60153	205 aa	Known RBP	12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	CYP4F8	P98187	520 aa		12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	SLC25A11	Q02978	314 aa	Known RBP	12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	EIF4EBP2	Q13542	120 aa	Predicted RBP	12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	HNRNPD	Q14103	355 aa	Known RBP	12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	VEPH1	Q14D04	833 aa		12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	COL28A1	Q2UY09	1125 aa		12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	BSPRY	Q5W0U4	402 aa		12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	TRIM68	Q6AZZ1	485 aa		12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	MSANTD2	Q6P1R3	559 aa		12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	C19orf48	Q6RUI8	117 aa		12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	RAB44	Q7Z6P3	723 aa	Predicted RBP	12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	SCD5	Q86SK9	330 aa		12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	RHOT1	Q8IXI2	618 aa		12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	UBL4B	Q8N7F7	174 aa		12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	NDRG1	Q92597	394 aa	Known RBP	12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	PIGK	Q92643	395 aa		12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	FAM149B1	Q96BN6	582 aa		12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	TRMT2B	Q96GJ1	504 aa	Known RBP	12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	SEPT5	Q99719	369 aa	Predicted RBP	12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	SMG9	Q9H0W8	520 aa	Known RBP	12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	ABCC13	Q9NSE7	274 aa		12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	CLIC5	Q9NZA1	410 aa		12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	STAP1	Q9ULZ2	295 aa		12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	12.08	□□□□□ -0.48
SNHG11-210	ENST00000442419	TMEM110-MUSTN1	A8MSY1	372 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	GRAP2	O75791	330 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	URI1	O94763	535 aa	Predicted RBP	12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	IGLV3-25	P01717	112 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	KRT7	P08729	469 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	HMGA1	P17096	107 aa	Known RBP	12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	ENG	P17813	658 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	BCKDHB	P21953	392 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	MIP	P30301	263 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	GJA4	P35212	333 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	HOXD12	P35452	270 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	PPP3CC	P48454	512 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	DHPS	P49366	369 aa	Predicted RBP	12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	CDR1	P51861	262 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	TAS2R40	P59535	323 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	YWHAG	P61981	247 aa	Known RBP eCLIP	12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	USP46	P62068	366 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	SCAP	Q12770	1279 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	HADH	Q16836	314 aa	Known RBP	12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	WHAMMP3	Q1A5X7	153 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	SPDYC	Q5MJ68	293 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	OTUD1	Q5VV17	481 aa	Predicted RBP	12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	SLC23A3	Q6PIS1	610 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	ZNF572	Q7Z3I7	529 aa	Predicted RBP	12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	CPNE8	Q86YQ8	564 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	CREG2	Q8IUH2	290 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	SYT12	Q8IV01	421 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	KATNAL2	Q8IYT4	538 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	RASGEF1C	Q8N431	466 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	CHCHD4	Q8N4Q1	142 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	CPA6	Q8N4T0	437 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	TEKT4	Q8WW24	435 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	NUP205	Q92621	2012 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	KRT35	Q92764	455 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	EZH1	Q92800	747 aa	Predicted RBP	12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	GOLGA1	Q92805	767 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	USP13	Q92995	863 aa	Predicted RBP	12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	CFAP57	Q96MR6	1250 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	TBCB	Q99426	244 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	TDP1	Q9NUW8	608 aa		12.07	□□□□□ -0.48
SNHG11-210	ENST00000442419	PACSIN2	Q9UNF0	486 aa	Predicted RBP	12.07	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms