RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 MAD1L1Q9Y6D9 718 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 ABHD14A-ACY1A0A1B0GW23 586 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 SDR42E2A6NKP2 422 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 KCNK1O00180 336 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 TM9SF1O15321 606 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 AVILO75366 819 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 KRT37O76014 449 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 EFEMP2O95967 443 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 MOCS2O96007 188 aaPredicted RBP13.5□□□□□ -0.25
CPSF4-206ENST00000441580 MYCP01106 439 aaPredicted RBP13.5□□□□□ -0.25
CPSF4-206ENST00000441580 SRGAP2BP0DMP2 458 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 DRD4P21917 467 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 CNTFP26441 200 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 MNX1P50219 401 aaPredicted RBP13.5□□□□□ -0.25
CPSF4-206ENST00000441580 RING1Q06587 406 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 ANO4Q32M45 955 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 TEX44Q53QW1 395 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 SYCP2LQ5T4T6 812 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 TTC39BQ5VTQ0 682 aaPredicted RBP13.5□□□□□ -0.25
CPSF4-206ENST00000441580 SDHAF4Q5VUM1 108 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 ARMC3Q5W041 872 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 MARK2Q7KZI7 788 aaKnown RBP13.5□□□□□ -0.25
CPSF4-206ENST00000441580 PID1Q7Z2X4 250 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 DEFB128Q7Z7B8 93 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 CPLX4Q7Z7G2 160 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 KLHDC8BQ8IXV7 354 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 CACNA2D3Q8IZS8 1091 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 AGGF1Q8N302 714 aaeCLIP13.5□□□□□ -0.25
CPSF4-206ENST00000441580 TTC9BQ8N6N2 239 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 PDCD7Q8N8D1 485 aaKnown RBP13.5□□□□□ -0.25
CPSF4-206ENST00000441580 TET1Q8NFU7 2136 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 MGARPQ8TDB4 240 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 MZB1Q8WU39 189 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 LRRN4Q8WUT4 740 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 BCL7CQ8WUZ0 217 aaPredicted RBP13.5□□□□□ -0.25
CPSF4-206ENST00000441580 CKAP2Q8WWK9 683 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 FATE1Q969F0 183 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 BTN2A3PQ96KV6 586 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 MAGEB18Q96M61 343 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 SIK2Q9H0K1 926 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 OSER1Q9NX31 292 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 MARCH2Q9P0N8 246 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 HCSTQ9UBK5 93 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 SNX10Q9Y5X0 201 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 HS3ST4Q9Y661 456 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 CDY1Q9Y6F8 540 aa13.5□□□□□ -0.25
CPSF4-206ENST00000441580 FAM159BA6NKW6 160 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 FAM155BO75949 473 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 KRT38O76015 456 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 KIAA0754O94854 1291 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 IGLV3-27P01718 113 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 ZDHHC11BP0C7U3 371 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 RHOQP17081 205 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 LAG3P18627 525 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 CA4P22748 312 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 IFNAR2P48551 515 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 TUFMP49411 452 aaKnown RBP13.49□□□□□ -0.25
CPSF4-206ENST00000441580 USP46P62068 366 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 EFEMP1Q12805 493 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 ZBTB17Q13105 803 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 MTM1Q13496 603 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 FRG1Q14331 258 aaKnown RBP13.49□□□□□ -0.25
CPSF4-206ENST00000441580 SPANXN3Q5MJ09 141 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 C10orf120Q5SQS8 335 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 AFMIDQ63HM1 303 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 NAPEPLDQ6IQ20 393 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 RNF19BQ6ZMZ0 732 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 LINC00523Q86TU6 105 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 TAX1BP1Q86VP1 789 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 TMEM173Q86WV6 379 aaPredicted RBP13.49□□□□□ -0.25
CPSF4-206ENST00000441580 ARHGAP12Q8IWW6 846 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 CTAGE3PQ8IX95 158 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 CMTR2Q8IYT2 770 aaKnown RBP13.49□□□□□ -0.25
CPSF4-206ENST00000441580 ZNF276Q8N554 614 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 ANKS4BQ8N8V4 417 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 FBXO22Q8NEZ5 403 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 DEPDC1BQ8WUY9 529 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 TTC17Q96AE7 1141 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 IGSF21Q96ID5 467 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 APOPT1Q96IL0 206 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 ZNF333Q96JL9 665 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 B3GALT6Q96L58 329 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 TEKT5Q96M29 485 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 ZNF558Q96NG5 402 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 RABEP2Q9H5N1 569 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 MKS1Q9NXB0 559 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 STK39Q9UEW8 545 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 AFF4Q9UHB7 1163 aaKnown RBP13.49□□□□□ -0.25
CPSF4-206ENST00000441580 ATP11BQ9Y2G3 1177 aa13.49□□□□□ -0.25
CPSF4-206ENST00000441580 HBS1LQ9Y450 684 aaKnown RBP13.49□□□□□ -0.25
CPSF4-206ENST00000441580 IGLV3-10A0A075B6K4 115 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 ARHGAP42A6NI28 874 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 SLC38A8A6NNN8 435 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 DFFAO00273 331 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 TYROBPO43914 113 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 ANXA9O76027 345 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 ALDH1A2O94788 518 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 VNN2O95498 520 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 C1QAP02745 245 aa13.48□□□□□ -0.25
CPSF4-206ENST00000441580 MT-ND3P03897 115 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms