RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 ACTRT3Q9BYD9 372 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 INO80BQ9C086 356 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 WDR12Q9GZL7 423 aaKnown RBP3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 ZNF287Q9HBT7 754 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 CD209Q9NNX6 404 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 SH3GLB2Q9NR46 395 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 TCP11L1Q9NUJ3 509 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 VPS54Q9P1Q0 977 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 LZTS1Q9Y250 596 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 STXBP5LQ9Y2K9 1186 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 PCDHB1Q9Y5F3 818 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 RAD54BQ9Y620 910 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 DOCK2Q92608 1830 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 AFF2P51816 1311 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 MYH14Q7Z406 1995 aaKnown RBP3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 GPR75-ASB3A0A0A6YYF3 556 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 hCG_1642624A0A1W2PR95 340 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 LINC00473A8K010 186 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 ADM5C9JUS6 153 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 POLR2DO15514 142 aaKnown RBP3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 NMT2O60551 498 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 TLR5O60602 858 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 UFL1O94874 794 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 ONECUT2O95948 504 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 FTLP02792 175 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 TSPY3P0CV98 308 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 TSPY8P0CW00 308 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 SKILP12757 684 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 SCG2P13521 617 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 GYS1P13807 737 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 IL1R1P14778 569 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 ZFXP17010 805 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 CALML3P27482 149 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 BTDP43251 543 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 ALDH9A1P49189 494 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 CCT8P50990 548 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 MC2RQ01718 297 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 MYL5Q02045 173 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 DSC2Q02487 901 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 LRMPQ12912 555 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 NOGQ13253 232 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 HABP2Q14520 560 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 GRM4Q14833 912 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 POLD3Q15054 466 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 POSTNQ15063 836 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 PFKFB3Q16875 520 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 TPD52L1Q16890 204 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 DGKKQ5KSL6 1271 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 SPECC1Q5M775 1068 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 MAEAQ7L5Y9 396 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 TMPRSS9Q7Z410 1059 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 FOXP4Q8IVH2 680 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 SMAP1Q8IYB5 467 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 TRIML1Q8N9V2 468 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 MLKLQ8NB16 471 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 CCDC150Q8NCX0 1101 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 PSD4Q8NDX1 1056 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 TBC1D22AQ8WUA7 517 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 TBC1D5Q92609 795 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 SMARCE1Q969G3 411 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 FAM136AQ96C01 138 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 DYNLL2Q96FJ2 89 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 NAF1Q96HR8 494 aaKnown RBP3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 VRK1Q99986 396 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 SENP7Q9BQF6 1050 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 PYM1Q9BRP8 204 aaKnown RBP3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 XPO4Q9C0E2 1151 aaKnown RBP3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 TINAGL1Q9GZM7 467 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 BTBD1Q9H0C5 482 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 OSBPL5Q9H0X9 879 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 ATP6V0A4Q9HBG4 840 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 SLAMF7Q9NQ25 335 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 IL17RBQ9NRM6 502 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 SAGE1Q9NXZ1 904 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 IFNKQ9P0W0 207 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 MAN1B1Q9UKM7 699 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 SH2B3Q9UQQ2 575 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 DGKBQ9Y6T7 804 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 MYH7P12883 1935 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 TCHHQ07283 1943 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 SCN7AQ01118 1682 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 NHSQ6T4R5 1651 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 THSD7AQ9UPZ6 1657 aa3.77□□□□□ -1.81
HMGB3P11-201ENST00000440127 DUOX1Q9NRD9 1551 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 FAM205AQ6ZU69 1335 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 A0A088AWK7 358 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 LRRC3CA6NJW4 275 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 LINC01548A6NM66 108 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 HMGB1P1B2RPK0 211 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 NT5C1B-RDH14C9J2C7 533 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 KIF2AO00139 706 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 FRS3O43559 492 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 RRP9O43818 475 aaKnown RBP3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 C1QL1O75973 258 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 SERPINC1P01008 464 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 TUBB4AP04350 444 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 ATXN1LP0C7T5 689 aaKnown RBP3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 EBLN1P0CF75 366 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 TNNT1P13805 278 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 SFPQP23246 707 aaKnown RBP eCLIP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms