RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 MLXIPLQ9NP71 852 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 OLA1Q9NTK5 396 aaKnown RBP12.08□□□□□ -0.48
SMAD3-202ENST00000439724 GMIPQ9P107 970 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 FNIP2Q9P278 1114 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 HCSTQ9UBK5 93 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 NUP205Q92621 2012 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 WASH4PA8MWX3 477 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 TCP11X1B4DZS4 312 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 TM9SF1O15321 606 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 VNN2O95498 520 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 EFEMP2O95967 443 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 HAPLN1P10915 354 aaPredicted RBP12.07□□□□□ -0.48
SMAD3-202ENST00000439724 PGAM1P18669 254 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 CCNCP24863 283 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 YWHAQP27348 245 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 SLC18A2Q05940 514 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 FAAP100Q0VG06 881 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 ZBTB17Q13105 803 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 ITIH4Q14624 930 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 RTP2Q5QGT7 225 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 LGSNQ5TDP6 509 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 TTC39BQ5VTQ0 682 aaPredicted RBP12.07□□□□□ -0.48
SMAD3-202ENST00000439724 NUGGCQ68CJ6 796 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 KCTD11Q693B1 232 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 RWDD4Q6NW29 188 aaKnown RBP12.07□□□□□ -0.48
SMAD3-202ENST00000439724 ARHGAP12Q8IWW6 846 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 PPM1NQ8N819 430 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 BANPQ8N9N5 519 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 CCDC197Q8NCU1 140 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 STKLD1Q8NE28 680 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 ZSCAN18Q8TBC5 510 aaPredicted RBP12.07□□□□□ -0.48
SMAD3-202ENST00000439724 DEPDC1BQ8WUY9 529 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 ARNTL2Q8WYA1 636 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 FBXO32Q969P5 355 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 B3GALT6Q96L58 329 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 TEKT5Q96M29 485 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 TGS1Q96RS0 853 aaKnown RBP12.07□□□□□ -0.48
SMAD3-202ENST00000439724 TTPALQ9BTX7 342 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 SMYD2Q9NRG4 433 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 MOCS1Q9NZB8 636 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 SAMD15Q9P1V8 674 aa12.07□□□□□ -0.48
SMAD3-202ENST00000439724 WDR27A2RRH5 827 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 CXorf49A8MYA2 514 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 E9PAM4 449 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 F5H423 210 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 ZBTB24O43167 697 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 KRT37O76014 449 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 OAS1P00973 400 aaKnown RBP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 MT-ND3P03897 115 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 SNRPAP09012 282 aaKnown RBP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 SRGAP2BP0DMP2 458 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 TAC1P20366 129 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 MGAT1P26572 445 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 CD68P34810 354 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 RPA3P35244 121 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 MNX1P50219 401 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 SERPINB9P50453 376 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 MLLT6P55198 1093 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 CCL23P55773 120 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 ARPP19P56211 112 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 TBX4P57082 545 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 CORO7P57737 925 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 RPL10AP62906 217 aaKnown RBP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 NAB1Q13506 487 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 TRIP4Q15650 581 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 SLC1A5Q15758 541 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 C1orf53Q5VUE5 145 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 AFMIDQ63HM1 303 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 ZNF449Q6P9G9 518 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 TRMT10BQ6PF06 316 aaKnown RBP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 RSPO2Q6UXX9 243 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 SH2D5Q6ZV89 423 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 MARK2Q7KZI7 788 aaKnown RBP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 TMEM173Q86WV6 379 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 CTAGE3PQ8IX95 158 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 CNPY4Q8N129 248 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 RTL3Q8N8U3 475 aaKnown RBP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 BCL7CQ8WUZ0 217 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 TTC17Q96AE7 1141 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 CELF6Q96J87 481 aaKnown RBP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 CABS1Q96KC9 395 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 CEP295NLQ96MC4 621 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 PPP1R12CQ9BZL4 782 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 CASS4Q9NQ75 786 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 TLR8Q9NR97 1041 aaKnown RBP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 FGFR1OP2Q9NVK5 253 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 NUDT5Q9UKK9 219 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 HS3ST4Q9Y661 456 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 COL4A6Q14031 1691 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 NYNRINQ9P2P1 1898 aaKnown RBP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 DOCK4Q8N1I0 1966 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 GOLGA6L7A0A1B0GV03 622 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 NT5C1B-RDH14C9J2C7 533 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 PSMD3O43242 534 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 CACNG3O60359 315 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 SNX3O60493 162 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 KIAA0754O94854 1291 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 MYCP01106 439 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 CSH1P0DML2 217 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms