RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 ACTL9Q8TC94 416 aa21.29■■□□□ 1
CHD3-204ENST00000439235 COL25A1Q9BXS0 654 aaPredicted RBP21.29■■□□□ 1
CHD3-204ENST00000439235 FAM50BQ9Y247 325 aa21.29■■□□□ 1
CHD3-204ENST00000439235 NR2E1Q9Y466 385 aa21.29■■□□□ 1
CHD3-204ENST00000439235 HEY1Q9Y5J3 304 aa21.29■■□□□ 1
CHD3-204ENST00000439235 MCF2LO15068 1137 aa21.28■■□□□ 1
CHD3-204ENST00000439235 TBL1XO60907 577 aa21.28■■□□□ 1
CHD3-204ENST00000439235 PHF2O75151 1096 aa21.28■■□□□ 1
CHD3-204ENST00000439235 CNTN5O94779 1100 aa21.28■■□□□ 1
CHD3-204ENST00000439235 PECAM1P16284 738 aaPredicted RBP21.28■■□□□ 1
CHD3-204ENST00000439235 SGSHP51688 502 aa21.28■■□□□ 1
CHD3-204ENST00000439235 NOMO1Q15155 1222 aa21.28■■□□□ 1
CHD3-204ENST00000439235 CCNG2Q16589 344 aa21.28■■□□□ 1
CHD3-204ENST00000439235 CYP1B1Q16678 543 aa21.28■■□□□ 1
CHD3-204ENST00000439235 VITQ6UXI7 678 aa21.28■■□□□ 1
CHD3-204ENST00000439235 NPNTQ6UXI9 565 aa21.28■■□□□ 1
CHD3-204ENST00000439235 TFAP2DQ7Z6R9 452 aa21.28■■□□□ 1
CHD3-204ENST00000439235 MFSD6LQ8IWD5 586 aa21.28■■□□□ 1
CHD3-204ENST00000439235 DDI1Q8WTU0 396 aa21.28■■□□□ 1
CHD3-204ENST00000439235 LRRC3BQ96PB8 259 aa21.28■■□□□ 1
CHD3-204ENST00000439235 PHF7Q9BWX1 381 aaPredicted RBP21.28■■□□□ 1
CHD3-204ENST00000439235 R3HDM2Q9Y2K5 976 aaKnown RBP21.28■■□□□ 1
CHD3-204ENST00000439235 MFHAS1Q9Y4C4 1052 aa21.28■■□□□ 1
CHD3-204ENST00000439235 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.27■■□□□ 1
CHD3-204ENST00000439235 NCAM2O15394 837 aa21.27■■□□□ 1
CHD3-204ENST00000439235 NFATC1O95644 943 aa21.27■■□□□ 1
CHD3-204ENST00000439235 MX2P20592 715 aa21.27■■□□□ 1
CHD3-204ENST00000439235 OR1E1P30953 314 aa21.27■■□□□ 1
CHD3-204ENST00000439235 CHRNA3P32297 505 aa21.27■■□□□ 1
CHD3-204ENST00000439235 NDST2P52849 883 aa21.27■■□□□ 1
CHD3-204ENST00000439235 GBE1Q04446 702 aa21.27■■□□□ 1
CHD3-204ENST00000439235 C2orf54Q08AI8 447 aa21.27■■□□□ 1
CHD3-204ENST00000439235 FCHO2Q0JRZ9 810 aa21.27■■□□□ 1
CHD3-204ENST00000439235 ZNF177Q13360 481 aaPredicted RBP21.27■■□□□ 1
CHD3-204ENST00000439235 C6orf118Q5T5N4 469 aa21.27■■□□□ 1
CHD3-204ENST00000439235 PARM1Q6UWI2 310 aa21.27■■□□□ 1
CHD3-204ENST00000439235 TPGS1Q6ZTW0 290 aa21.27■■□□□ 1
CHD3-204ENST00000439235 ZDHHC14Q8IZN3 488 aa21.27■■□□□ 1
CHD3-204ENST00000439235 UMODL1-AS1Q8N2C9 162 aa21.27■■□□□ 1
CHD3-204ENST00000439235 NPWQ8N729 165 aa21.27■■□□□ 1
CHD3-204ENST00000439235 C1orf54Q8WWF1 131 aa21.27■■□□□ 1
CHD3-204ENST00000439235 ATP2A3Q93084 1043 aa21.27■■□□□ 1
CHD3-204ENST00000439235 MAGOHBQ96A72 148 aaKnown RBP21.27■■□□□ 1
CHD3-204ENST00000439235 RUNDC3BQ96NL0 473 aa21.27■■□□□ 1
CHD3-204ENST00000439235 LRRC19Q9H756 370 aa21.27■■□□□ 1
CHD3-204ENST00000439235 SPHK2Q9NRA0 654 aa21.27■■□□□ 1
CHD3-204ENST00000439235 RBM12Q9NTZ6 932 aaKnown RBP21.27■■□□□ 1
CHD3-204ENST00000439235 DTLQ9NZJ0 730 aa21.27■■□□□ 1
CHD3-204ENST00000439235 ZNF212Q9UDV6 495 aa21.27■■□□□ 1
CHD3-204ENST00000439235 PPP1R12AO14974 1030 aaPredicted RBP21.26■□□□□ 0.99
CHD3-204ENST00000439235 LIASO43766 372 aa21.26■□□□□ 0.99
CHD3-204ENST00000439235 LUC7L3O95232 432 aaKnown RBP21.26■□□□□ 0.99
CHD3-204ENST00000439235 SLU7O95391 586 aaKnown RBP21.26■□□□□ 0.99
CHD3-204ENST00000439235 ADH1CP00326 375 aa21.26■□□□□ 0.99
CHD3-204ENST00000439235 PSMC3P17980 439 aa21.26■□□□□ 0.99
CHD3-204ENST00000439235 FNTAP49354 379 aa21.26■□□□□ 0.99
CHD3-204ENST00000439235 EIF3EP60228 445 aaKnown RBP21.26■□□□□ 0.99
CHD3-204ENST00000439235 XRCC4Q13426 336 aa21.26■□□□□ 0.99
CHD3-204ENST00000439235 PDK1Q15118 436 aa21.26■□□□□ 0.99
CHD3-204ENST00000439235 SMAD2Q15796 467 aaKnown RBP21.26■□□□□ 0.99
CHD3-204ENST00000439235 DRICH1Q6PGQ1 229 aaPredicted RBP21.26■□□□□ 0.99
CHD3-204ENST00000439235 SETD3Q86TU7 594 aaPredicted RBP21.26■□□□□ 0.99
CHD3-204ENST00000439235 PLCD3Q8N3E9 789 aa21.26■□□□□ 0.99
CHD3-204ENST00000439235 ZNF557Q8N988 423 aaPredicted RBP21.26■□□□□ 0.99
CHD3-204ENST00000439235 MAFAQ8NHW3 353 aaPredicted RBP21.26■□□□□ 0.99
CHD3-204ENST00000439235 ATG4AQ8WYN0 398 aa21.26■□□□□ 0.99
CHD3-204ENST00000439235 IRF7Q92985 503 aa21.26■□□□□ 0.99
CHD3-204ENST00000439235 KXD1Q9BQD3 176 aa21.26■□□□□ 0.99
CHD3-204ENST00000439235 LINC00597Q9H2U6 94 aa21.26■□□□□ 0.99
CHD3-204ENST00000439235 MARK1Q9P0L2 795 aa21.26■□□□□ 0.99
CHD3-204ENST00000439235 SAE1Q9UBE0 346 aaPredicted RBP21.26■□□□□ 0.99
CHD3-204ENST00000439235 ANHXE9PGG2 379 aa21.25■□□□□ 0.99
CHD3-204ENST00000439235 H0Y626 953 aa21.25■□□□□ 0.99
CHD3-204ENST00000439235 RAMP2O60895 175 aa21.25■□□□□ 0.99
CHD3-204ENST00000439235 ZNF189O75820 626 aaPredicted RBP21.25■□□□□ 0.99
CHD3-204ENST00000439235 PENKP01210 267 aaPredicted RBP21.25■□□□□ 0.99
CHD3-204ENST00000439235 RHOCP08134 193 aa21.25■□□□□ 0.99
CHD3-204ENST00000439235 SP100P23497 879 aaPredicted RBP21.25■□□□□ 0.99
CHD3-204ENST00000439235 HOXD9P28356 352 aaPredicted RBP21.25■□□□□ 0.99
CHD3-204ENST00000439235 YBEYP58557 167 aaPredicted RBP21.25■□□□□ 0.99
CHD3-204ENST00000439235 GALNT2Q10471 571 aa21.25■□□□□ 0.99
CHD3-204ENST00000439235 CDH18Q13634 790 aa21.25■□□□□ 0.99
CHD3-204ENST00000439235 HTR4Q13639 388 aa21.25■□□□□ 0.99
CHD3-204ENST00000439235 EML3Q32P44 896 aa21.25■□□□□ 0.99
CHD3-204ENST00000439235 FYB2Q5VWT5 728 aa21.25■□□□□ 0.99
CHD3-204ENST00000439235 PTCRAQ6ISU1 281 aaPredicted RBP21.25■□□□□ 0.99
CHD3-204ENST00000439235 CDKL3Q8IVW4 592 aaPredicted RBP21.25■□□□□ 0.99
CHD3-204ENST00000439235 MFN1Q8IWA4 741 aa21.25■□□□□ 0.99
CHD3-204ENST00000439235 ADGRG2Q8IZP9 1017 aa21.25■□□□□ 0.99
CHD3-204ENST00000439235 CARNMT1Q8N4J0 409 aa21.25■□□□□ 0.99
CHD3-204ENST00000439235 SLC35B2Q8TB61 432 aa21.25■□□□□ 0.99
CHD3-204ENST00000439235 FGF14Q92915 247 aa21.25■□□□□ 0.99
CHD3-204ENST00000439235 NKD2Q969F2 451 aaPredicted RBP21.25■□□□□ 0.99
CHD3-204ENST00000439235 CELF6Q96J87 481 aaKnown RBP21.25■□□□□ 0.99
CHD3-204ENST00000439235 OLFM3Q96PB7 478 aa21.25■□□□□ 0.99
CHD3-204ENST00000439235 BBS2Q9BXC9 721 aa21.25■□□□□ 0.99
CHD3-204ENST00000439235 KLC2Q9H0B6 622 aa21.25■□□□□ 0.99
CHD3-204ENST00000439235 BRD8Q9H0E9 1235 aa21.25■□□□□ 0.99
CHD3-204ENST00000439235 HACD1B0YJ81 288 aa21.24■□□□□ 0.99
CHD3-204ENST00000439235 C2CD4DB7Z1M9 353 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms