RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 TMEM200AQ86VY9 491 aa4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 SUGP1Q8IWZ8 645 aaKnown RBP4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 PAQR4Q8N4S7 273 aaPredicted RBP4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 OR52N4Q8NGI2 321 aa4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 ZFPM2Q8WW38 1151 aa4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 ATP2A3Q93084 1043 aa4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 TRIM31Q9BZY9 425 aa4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 SLC25A13Q9UJS0 675 aa4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 SLC8A2Q9UPR5 921 aa4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 LZTS1Q9Y250 596 aa4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 DTX4Q9Y2E6 619 aa4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 LRRFIP2Q9Y608 721 aaKnown RBP4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 WIPF3A6NGB9 483 aa4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 HMGB1P1B2RPK0 211 aaPredicted RBP4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 PRPF4O43172 522 aaKnown RBP eCLIP4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 ANP32CO43423 234 aa4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 CYP21A2P08686 494 aa4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 PEPDP12955 493 aa4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 PKMP14618 531 aaKnown RBP4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 FBLP22087 321 aaKnown RBP4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 GSTM2P28161 218 aa4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 EPHB2P29323 1055 aa4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 MPGP29372 298 aa4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 HOXA7P31268 230 aaPredicted RBP4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 CPA2P48052 419 aa4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 YPEL5P62699 121 aa4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 VAMP2P63027 116 aa4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 TLE2Q04725 743 aa4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 UBE3AQ05086 875 aa4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 DAZAP2Q15038 168 aaPredicted RBP4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 SEC23BQ15437 767 aa4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 SRSF7Q16629 238 aaKnown RBP eCLIP4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 RUNDC3AQ59EK9 446 aa4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 ZNF484Q5JVG2 852 aa4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 CBWD5Q5RIA9 395 aa4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 SLC18B1Q6NT16 456 aa4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 DPY19L2P1Q6NXN4 242 aa4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 SYNE3Q6ZMZ3 975 aa4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 ZNF66Q6ZN08 573 aa4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 FAM57BQ71RH2 274 aa4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 NEK8Q86SG6 692 aa4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 RILPL2Q969X0 211 aa4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 OSBPL5Q9H0X9 879 aaPredicted RBP4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 TXNRD2Q9NNW7 524 aa4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 PGAP2Q9UHJ9 254 aa4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 SLC13A4Q9UKG4 626 aa4.18□□□□□ -1.74
LSM1P1-201ENST00000438629 CCDC196A0A1B0GTZ2 297 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 SMIM35A0A1B0GVV1 85 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 CCDC189A1A4V9 331 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 KCNJ18B7U540 433 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 STX16-NPEPL1H3BU86 382 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 MASP2O00187 686 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 STX16O14662 325 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 METTL18O95568 372 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 CELA2AP08217 269 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 CYP4B1P13584 511 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 ST6GAL1P15907 406 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 XBP1P17861 261 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 KELP23276 732 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 PRPH2P23942 346 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 ATP5F1P24539 256 aaPredicted RBP4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 TBL3Q12788 808 aaKnown RBP4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 TRIP6Q15654 476 aaKnown RBP4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 EZH2Q15910 746 aaKnown RBP4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 ALFQ53S48 1182 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 MAP3K21Q5TCX8 1036 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 VWA5B1Q5TIE3 1220 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 NAA35Q5VZE5 725 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 ISM2Q6H9L7 571 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 AADACL2Q6P093 401 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 DEF8Q6ZN54 512 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 BBS12Q6ZW61 710 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 YTHDF3Q7Z739 585 aaKnown RBP4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 LRRTM4Q86VH4 590 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 KLBQ86Z14 1044 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 CNGA4Q8IV77 575 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 ADGRF4Q8IZF3 695 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 PRSS3P2Q8NHM4 247 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 NOC3LQ8WTT2 800 aaKnown RBP4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 HERVK_113Q902F9 699 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 NCSTNQ92542 709 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 KCNJ9Q92806 393 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 RBM17Q96I25 401 aaKnown RBP4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 ADAD1Q96M93 576 aaKnown RBP4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 SIGLEC11Q96RL6 698 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 TWNKQ96RR1 684 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 ZNF347Q96SE7 839 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 TUBB6Q9BUF5 446 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 SLC22A11Q9NSA0 550 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 THAP1Q9NVV9 213 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 RRN3Q9NYV6 651 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 KLQ9UEF7 1012 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 DNAJC16Q9Y2G8 782 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 PKP3Q9Y446 797 aa4.17□□□□□ -1.74
LSM1P1-201ENST00000438629 SLC22A23A1A5C7 686 aa4.16□□□□□ -1.74
LSM1P1-201ENST00000438629 C2CD4BA6NLJ0 364 aa4.16□□□□□ -1.74
LSM1P1-201ENST00000438629 F8W810 466 aa4.16□□□□□ -1.74
LSM1P1-201ENST00000438629 NCAM2O15394 837 aa4.16□□□□□ -1.74
LSM1P1-201ENST00000438629 BCAR3O75815 825 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms