RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 ZNF33AQ06730 810 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 LMAN2Q12907 356 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 PTP4A2Q12974 167 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 BYSLQ13895 437 aaKnown RBP17.53■□□□□ 0.4
UBE3D-204ENST00000430071 DCAF6Q58WW2 860 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 TRIM61Q5EBN2 209 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 MS4A13Q5J8X5 152 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 IL31Q6EBC2 164 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 OR6B2Q6IFH4 312 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 SERPINA13PQ6UXR4 307 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 TMPRSS6Q8IU80 811 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 SYT12Q8IV01 421 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 LGI2Q8N0V4 545 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 SPC24Q8NBT2 197 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 MYO19Q96H55 970 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 TMEM245Q9H330 911 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 SYNCQ9H7C4 482 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 COX16Q9P0S2 106 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 GIPC1O14908 333 aa17.52■□□□□ 0.39
UBE3D-204ENST00000430071 TFE3P19532 575 aaPredicted RBP17.52■□□□□ 0.39
UBE3D-204ENST00000430071 EIF4A3P38919 411 aaKnown RBP17.52■□□□□ 0.39
UBE3D-204ENST00000430071 NNTQ13423 1086 aa17.52■□□□□ 0.39
UBE3D-204ENST00000430071 STARD3Q14849 445 aa17.52■□□□□ 0.39
UBE3D-204ENST00000430071 EIF4HQ15056 248 aaKnown RBP17.52■□□□□ 0.39
UBE3D-204ENST00000430071 FNDC3BQ53EP0 1204 aaKnown RBP17.52■□□□□ 0.39
UBE3D-204ENST00000430071 OLFML1Q6UWY5 402 aa17.52■□□□□ 0.39
UBE3D-204ENST00000430071 BEND5Q7L4P6 421 aa17.52■□□□□ 0.39
UBE3D-204ENST00000430071 CIR1Q86X95 450 aaPredicted RBP17.52■□□□□ 0.39
UBE3D-204ENST00000430071 XYLT1Q86Y38 959 aa17.52■□□□□ 0.39
UBE3D-204ENST00000430071 DNAAF5Q86Y56 855 aa17.52■□□□□ 0.39
UBE3D-204ENST00000430071 PHF13Q86YI8 300 aaPredicted RBP17.52■□□□□ 0.39
UBE3D-204ENST00000430071 CARNMT1Q8N4J0 409 aa17.52■□□□□ 0.39
UBE3D-204ENST00000430071 OR2I1PQ8NGU4 316 aa17.52■□□□□ 0.39
UBE3D-204ENST00000430071 C18orf8Q96DM3 657 aa17.52■□□□□ 0.39
UBE3D-204ENST00000430071 HSPA12BQ96MM6 686 aa17.52■□□□□ 0.39
UBE3D-204ENST00000430071 SLC2A13Q96QE2 648 aa17.52■□□□□ 0.39
UBE3D-204ENST00000430071 CHP1Q99653 195 aa17.52■□□□□ 0.39
UBE3D-204ENST00000430071 C11orf70Q9BRQ4 267 aa17.52■□□□□ 0.39
UBE3D-204ENST00000430071 ITM2CQ9NQX7 267 aa17.52■□□□□ 0.39
UBE3D-204ENST00000430071 WSB2Q9NYS7 404 aaPredicted RBP17.52■□□□□ 0.39
UBE3D-204ENST00000430071 USP36Q9P275 1121 aaKnown RBP17.52■□□□□ 0.39
UBE3D-204ENST00000430071 ADAMTS1Q9UHI8 967 aa17.52■□□□□ 0.39
UBE3D-204ENST00000430071 A0A087X0T9 212 aa17.51■□□□□ 0.39
UBE3D-204ENST00000430071 TMCO5BA8MYB1 307 aa17.51■□□□□ 0.39
UBE3D-204ENST00000430071 SART1O43290 800 aaKnown RBP17.51■□□□□ 0.39
UBE3D-204ENST00000430071 ZNF217O75362 1048 aa17.51■□□□□ 0.39
UBE3D-204ENST00000430071 FAM228BP0C875 321 aa17.51■□□□□ 0.39
UBE3D-204ENST00000430071 TACR2P21452 398 aa17.51■□□□□ 0.39
UBE3D-204ENST00000430071 GGCXP38435 758 aa17.51■□□□□ 0.39
UBE3D-204ENST00000430071 CTSOP43234 321 aaPredicted RBP17.51■□□□□ 0.39
UBE3D-204ENST00000430071 NSFP46459 744 aaKnown RBP17.51■□□□□ 0.39
UBE3D-204ENST00000430071 TPMTP51580 245 aa17.51■□□□□ 0.39
UBE3D-204ENST00000430071 IRAK1P51617 712 aa17.51■□□□□ 0.39
UBE3D-204ENST00000430071 CAMK2GQ13555 558 aaPredicted RBP17.51■□□□□ 0.39
UBE3D-204ENST00000430071 TSR1Q2NL82 804 aaKnown RBP17.51■□□□□ 0.39
UBE3D-204ENST00000430071 MPP7Q5T2T1 576 aa17.51■□□□□ 0.39
UBE3D-204ENST00000430071 OTUD1Q5VV17 481 aaPredicted RBP17.51■□□□□ 0.39
UBE3D-204ENST00000430071 PEAR1Q5VY43 1037 aaPredicted RBP17.51■□□□□ 0.39
UBE3D-204ENST00000430071 ACAD10Q6JQN1 1059 aa17.51■□□□□ 0.39
UBE3D-204ENST00000430071 SLC36A4Q6YBV0 504 aa17.51■□□□□ 0.39
UBE3D-204ENST00000430071 MON1BQ7L1V2 547 aa17.51■□□□□ 0.39
UBE3D-204ENST00000430071 MFN1Q8IWA4 741 aa17.51■□□□□ 0.39
UBE3D-204ENST00000430071 HJURPQ8NCD3 748 aaPredicted RBP17.51■□□□□ 0.39
UBE3D-204ENST00000430071 FIBINQ8TAL6 211 aa17.51■□□□□ 0.39
UBE3D-204ENST00000430071 WFIKKN2Q8TEU8 576 aa17.51■□□□□ 0.39
UBE3D-204ENST00000430071 SIPA1Q96FS4 1042 aa17.51■□□□□ 0.39
UBE3D-204ENST00000430071 TOE1Q96GM8 510 aaKnown RBP17.51■□□□□ 0.39
UBE3D-204ENST00000430071 PRMT1Q99873 361 aaKnown RBP17.51■□□□□ 0.39
UBE3D-204ENST00000430071 ZNHIT6Q9NWK9 470 aaKnown RBP17.51■□□□□ 0.39
UBE3D-204ENST00000430071 NPC1O15118 1278 aa17.5■□□□□ 0.39
UBE3D-204ENST00000430071 ZBTB24O43167 697 aaPredicted RBP17.5■□□□□ 0.39
UBE3D-204ENST00000430071 TIMM44O43615 452 aa17.5■□□□□ 0.39
UBE3D-204ENST00000430071 SYNCRIPO60506 623 aaKnown RBP17.5■□□□□ 0.39
UBE3D-204ENST00000430071 SNX16P57768 344 aa17.5■□□□□ 0.39
UBE3D-204ENST00000430071 SLC6A3Q01959 620 aa17.5■□□□□ 0.39
UBE3D-204ENST00000430071 ASTE1Q2TB18 679 aaPredicted RBP17.5■□□□□ 0.39
UBE3D-204ENST00000430071 SPDYCQ5MJ68 293 aa17.5■□□□□ 0.39
UBE3D-204ENST00000430071 N4BP2L1Q5TBK1 243 aaPredicted RBP17.5■□□□□ 0.39
UBE3D-204ENST00000430071 SLC26A9Q7LBE3 791 aa17.5■□□□□ 0.39
UBE3D-204ENST00000430071 PHLDB2Q86SQ0 1253 aa17.5■□□□□ 0.39
UBE3D-204ENST00000430071 FAM124AQ86V42 546 aa17.5■□□□□ 0.39
UBE3D-204ENST00000430071 CHSY1Q86X52 802 aa17.5■□□□□ 0.39
UBE3D-204ENST00000430071 APCDD1Q8J025 514 aa17.5■□□□□ 0.39
UBE3D-204ENST00000430071 AHI1Q8N157 1196 aa17.5■□□□□ 0.39
UBE3D-204ENST00000430071 MSANTD4Q8NCY6 345 aa17.5■□□□□ 0.39
UBE3D-204ENST00000430071 ZNF419Q96HQ0 510 aaPredicted RBP17.5■□□□□ 0.39
UBE3D-204ENST00000430071 MRGPRX3Q96LB0 322 aa17.5■□□□□ 0.39
UBE3D-204ENST00000430071 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.5■□□□□ 0.39
UBE3D-204ENST00000430071 GPR174Q9BXC1 333 aa17.5■□□□□ 0.39
UBE3D-204ENST00000430071 EPG5Q9HCE0 2579 aa17.5■□□□□ 0.39
UBE3D-204ENST00000430071 PRSS16Q9NQE7 514 aa17.5■□□□□ 0.39
UBE3D-204ENST00000430071 ANLNQ9NQW6 1124 aa17.5■□□□□ 0.39
UBE3D-204ENST00000430071 ADAM22Q9P0K1 906 aa17.5■□□□□ 0.39
UBE3D-204ENST00000430071 EVLQ9UI08 416 aaPredicted RBP17.5■□□□□ 0.39
UBE3D-204ENST00000430071 SLCO1B1Q9Y6L6 691 aa17.5■□□□□ 0.39
UBE3D-204ENST00000430071 CEP295Q9C0D2 2601 aa17.49■□□□□ 0.39
UBE3D-204ENST00000430071 KCNU1A8MYU2 1149 aa17.49■□□□□ 0.39
UBE3D-204ENST00000430071 GOLGA8SH3BPF8 625 aa17.49■□□□□ 0.39
UBE3D-204ENST00000430071 I6L893 689 aaPredicted RBP17.49■□□□□ 0.39
UBE3D-204ENST00000430071 CFIP05156 583 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms